RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 MARCKSP29966 332 aaPredicted RBP26.71■■□□□ 1.87
FOXA1-202ENST00000545425 FANCCQ00597 558 aa26.71■■□□□ 1.87
FOXA1-202ENST00000545425 ZNF652Q9Y2D9 606 aa26.71■■□□□ 1.87
FOXA1-202ENST00000545425 XBP1P17861 261 aa26.7■■□□□ 1.87
FOXA1-202ENST00000545425 INTS5Q6P9B9 1019 aaKnown RBP26.7■■□□□ 1.87
FOXA1-202ENST00000545425 FCHSD1Q86WN1 690 aa26.7■■□□□ 1.87
FOXA1-202ENST00000545425 ARHGEF1Q92888 912 aaKnown RBP26.7■■□□□ 1.87
FOXA1-202ENST00000545425 ARMT1Q9H993 441 aa26.7■■□□□ 1.87
FOXA1-202ENST00000545425 GJB4Q9NTQ9 266 aa26.7■■□□□ 1.87
FOXA1-202ENST00000545425 SLC4A4Q9Y6R1 1079 aa26.7■■□□□ 1.87
FOXA1-202ENST00000545425 BMP15O95972 392 aa26.69■■□□□ 1.86
FOXA1-202ENST00000545425 RFC4P35249 363 aa26.69■■□□□ 1.86
FOXA1-202ENST00000545425 NT5C2P49902 561 aa26.69■■□□□ 1.86
FOXA1-202ENST00000545425 CNNM3Q8NE01 707 aa26.69■■□□□ 1.86
FOXA1-202ENST00000545425 AIFM3Q96NN9 605 aa26.69■■□□□ 1.86
FOXA1-202ENST00000545425 ZNF804BA4D1E1 1349 aa26.69■■□□□ 1.86
FOXA1-202ENST00000545425 CAMTA2O94983 1202 aa26.69■■□□□ 1.86
FOXA1-202ENST00000545425 PTPREP23469 700 aa26.69■■□□□ 1.86
FOXA1-202ENST00000545425 TMC6Q7Z403 805 aa26.69■■□□□ 1.86
FOXA1-202ENST00000545425 RNF26Q9BY78 433 aaPredicted RBP26.69■■□□□ 1.86
FOXA1-202ENST00000545425 COL5A3P25940 1745 aaPredicted RBP26.68■■□□□ 1.86
FOXA1-202ENST00000545425 NCBP1Q09161 790 aaKnown RBP26.68■■□□□ 1.86
FOXA1-202ENST00000545425 ESR2Q92731 530 aa26.68■■□□□ 1.86
FOXA1-202ENST00000545425 DENND2AQ9ULE3 1009 aa26.68■■□□□ 1.86
FOXA1-202ENST00000545425 ZBTB22O15209 634 aa26.67■■□□□ 1.86
FOXA1-202ENST00000545425 IGSF3O75054 1194 aa26.67■■□□□ 1.86
FOXA1-202ENST00000545425 NT5DC1Q5TFE4 455 aa26.67■■□□□ 1.86
FOXA1-202ENST00000545425 NLGN1Q8N2Q7 840 aa26.67■■□□□ 1.86
FOXA1-202ENST00000545425 CRACR2BQ8N4Y2 399 aaPredicted RBP26.67■■□□□ 1.86
FOXA1-202ENST00000545425 MLKLQ8NB16 471 aa26.67■■□□□ 1.86
FOXA1-202ENST00000545425 ERO1AQ96HE7 468 aa26.67■■□□□ 1.86
FOXA1-202ENST00000545425 NTSR2O95665 410 aa26.67■■□□□ 1.86
FOXA1-202ENST00000545425 CTDSPL2Q05D32 466 aa26.67■■□□□ 1.86
FOXA1-202ENST00000545425 CLEC4GQ6UXB4 293 aa26.67■■□□□ 1.86
FOXA1-202ENST00000545425 DIS3L2Q8IYB7 885 aaKnown RBP26.67■■□□□ 1.86
FOXA1-202ENST00000545425 HELBQ8NG08 1087 aaPredicted RBP26.67■■□□□ 1.86
FOXA1-202ENST00000545425 ERCC4Q92889 916 aaPredicted RBP26.67■■□□□ 1.86
FOXA1-202ENST00000545425 UBAC1Q9BSL1 405 aa26.67■■□□□ 1.86
FOXA1-202ENST00000545425 SENP2Q9HC62 589 aa26.67■■□□□ 1.86
FOXA1-202ENST00000545425 LRP2BPQ9P2M1 347 aa26.67■■□□□ 1.86
FOXA1-202ENST00000545425 CALM1P0DP23 149 aa26.66■■□□□ 1.86
FOXA1-202ENST00000545425 CALM2P0DP24 149 aa26.66■■□□□ 1.86
FOXA1-202ENST00000545425 CALM3P0DP25 149 aa26.66■■□□□ 1.86
FOXA1-202ENST00000545425 UBE4AQ14139 1066 aa26.66■■□□□ 1.86
FOXA1-202ENST00000545425 ARID5BQ14865 1188 aa26.66■■□□□ 1.86
FOXA1-202ENST00000545425 BIN1O00499 593 aa26.65■■□□□ 1.86
FOXA1-202ENST00000545425 PPARAQ07869 468 aa26.65■■□□□ 1.86
FOXA1-202ENST00000545425 PPP4R3BQ5MIZ7 849 aa26.65■■□□□ 1.86
FOXA1-202ENST00000545425 LCORLQ8N3X6 602 aa26.65■■□□□ 1.86
FOXA1-202ENST00000545425 FANCBQ8NB91 859 aa26.65■■□□□ 1.86
FOXA1-202ENST00000545425 PDS5AQ29RF7 1337 aaKnown RBP26.65■■□□□ 1.86
FOXA1-202ENST00000545425 SEMA3EO15041 775 aa26.65■■□□□ 1.86
FOXA1-202ENST00000545425 RXRAP19793 462 aa26.65■■□□□ 1.86
FOXA1-202ENST00000545425 ZNF654Q8IZM8 581 aa26.65■■□□□ 1.86
FOXA1-202ENST00000545425 TSC1Q92574 1164 aa26.65■■□□□ 1.86
FOXA1-202ENST00000545425 RBM28Q9NW13 759 aaKnown RBP26.65■■□□□ 1.86
FOXA1-202ENST00000545425 SRPRBQ9Y5M8 271 aaKnown RBP26.65■■□□□ 1.86
FOXA1-202ENST00000545425 UBASH3AP57075 661 aa26.64■■□□□ 1.85
FOXA1-202ENST00000545425 ARMCX5Q6P1M9 558 aa26.64■■□□□ 1.85
FOXA1-202ENST00000545425 METTL16Q86W50 562 aaKnown RBP26.64■■□□□ 1.85
FOXA1-202ENST00000545425 BRIP1Q9BX63 1249 aa26.64■■□□□ 1.85
FOXA1-202ENST00000545425 A0A087WWV3 80 aa26.63■■□□□ 1.85
FOXA1-202ENST00000545425 MDM2Q00987 491 aaPredicted RBP26.63■■□□□ 1.85
FOXA1-202ENST00000545425 FBXO2Q9UK22 296 aaPredicted RBP26.63■■□□□ 1.85
FOXA1-202ENST00000545425 CD2APQ9Y5K6 639 aa26.63■■□□□ 1.85
FOXA1-202ENST00000545425 SERPINC1P01008 464 aa26.62■■□□□ 1.85
FOXA1-202ENST00000545425 AKAP17AQ02040 695 aaKnown RBP26.62■■□□□ 1.85
FOXA1-202ENST00000545425 CHRNDQ07001 517 aa26.62■■□□□ 1.85
FOXA1-202ENST00000545425 NKX2-3Q8TAU0 364 aa26.62■■□□□ 1.85
FOXA1-202ENST00000545425 HSD3B7Q9H2F3 369 aa26.62■■□□□ 1.85
FOXA1-202ENST00000545425 MAGEB6P1A0A0J9YX57 407 aa26.62■■□□□ 1.85
FOXA1-202ENST00000545425 LONRF3Q496Y0 759 aa26.62■■□□□ 1.85
FOXA1-202ENST00000545425 VSTM4Q8IW00 320 aa26.62■■□□□ 1.85
FOXA1-202ENST00000545425 STK11IPQ8N1F8 1099 aa26.62■■□□□ 1.85
FOXA1-202ENST00000545425 FBXW7Q969H0 707 aa26.62■■□□□ 1.85
FOXA1-202ENST00000545425 GOLGA6L9A6NEM1 432 aa26.61■■□□□ 1.85
FOXA1-202ENST00000545425 USP27XA6NNY8 438 aa26.61■■□□□ 1.85
FOXA1-202ENST00000545425 BTBD18B2RXH4 712 aa26.61■■□□□ 1.85
FOXA1-202ENST00000545425 SLU7O95391 586 aaKnown RBP26.61■■□□□ 1.85
FOXA1-202ENST00000545425 GYS1P13807 737 aa26.61■■□□□ 1.85
FOXA1-202ENST00000545425 CYP7A1P22680 504 aa26.61■■□□□ 1.85
FOXA1-202ENST00000545425 LMOD1P29536 600 aaPredicted RBP26.61■■□□□ 1.85
FOXA1-202ENST00000545425 BCAMP50895 628 aa26.61■■□□□ 1.85
FOXA1-202ENST00000545425 PNOCQ13519 176 aa26.61■■□□□ 1.85
FOXA1-202ENST00000545425 POSTNQ15063 836 aa26.61■■□□□ 1.85
FOXA1-202ENST00000545425 SF3B3Q15393 1217 aaKnown RBP26.61■■□□□ 1.85
FOXA1-202ENST00000545425 E4F1Q66K89 784 aaPredicted RBP26.61■■□□□ 1.85
FOXA1-202ENST00000545425 ENOX1Q8TC92 643 aaKnown RBP26.61■■□□□ 1.85
FOXA1-202ENST00000545425 L2HGDHQ9H9P8 463 aa26.61■■□□□ 1.85
FOXA1-202ENST00000545425 SEC31BQ9NQW1 1179 aa26.61■■□□□ 1.85
FOXA1-202ENST00000545425 NIP7Q9Y221 180 aaKnown RBP eCLIP26.61■■□□□ 1.85
FOXA1-202ENST00000545425 PCDHA5Q9Y5H7 936 aa26.61■■□□□ 1.85
FOXA1-202ENST00000545425 FGRP09769 529 aa26.6■■□□□ 1.85
FOXA1-202ENST00000545425 SARSP49591 514 aaKnown RBP26.6■■□□□ 1.85
FOXA1-202ENST00000545425 SEC23AQ15436 765 aa26.6■■□□□ 1.85
FOXA1-202ENST00000545425 PPP1R13BQ96KQ4 1090 aa26.6■■□□□ 1.85
FOXA1-202ENST00000545425 MYL10Q9BUA6 226 aa26.6■■□□□ 1.85
FOXA1-202ENST00000545425 TMX1Q9H3N1 280 aa26.6■■□□□ 1.85
FOXA1-202ENST00000545425 A0A1B0GUL6 1792 aa26.6■■□□□ 1.85
FOXA1-202ENST00000545425 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms