RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 ZFPM1Q8IX07 1006 aa16.17■□□□□ 0.18
SCARB1-209ENST00000545305 NKX2-3Q8TAU0 364 aa16.17■□□□□ 0.18
SCARB1-209ENST00000545305 IGDCC4Q8TDY8 1250 aa16.17■□□□□ 0.18
SCARB1-209ENST00000545305 LY9Q9HBG7 655 aa16.17■□□□□ 0.18
SCARB1-209ENST00000545305 CWC22Q9HCG8 908 aaKnown RBP16.17■□□□□ 0.18
SCARB1-209ENST00000545305 GPHNQ9NQX3 736 aaPredicted RBP16.17■□□□□ 0.18
SCARB1-209ENST00000545305 DDTLA6NHG4 134 aaPredicted RBP16.16■□□□□ 0.18
SCARB1-209ENST00000545305 PFKFB2O60825 505 aa16.16■□□□□ 0.18
SCARB1-209ENST00000545305 DDNO94850 711 aaPredicted RBP16.16■□□□□ 0.18
SCARB1-209ENST00000545305 EVCP57679 992 aa16.16■□□□□ 0.18
SCARB1-209ENST00000545305 GABPAQ06546 454 aa16.16■□□□□ 0.18
SCARB1-209ENST00000545305 SGMS1Q86VZ5 419 aa16.16■□□□□ 0.18
SCARB1-209ENST00000545305 FOXP4Q8IVH2 680 aaPredicted RBP16.16■□□□□ 0.18
SCARB1-209ENST00000545305 NECAB1Q8N987 351 aa16.16■□□□□ 0.18
SCARB1-209ENST00000545305 GTF3C6Q969F1 213 aa16.16■□□□□ 0.18
SCARB1-209ENST00000545305 CSRNP1Q96S65 589 aa16.16■□□□□ 0.18
SCARB1-209ENST00000545305 CNTNAP1P78357 1384 aa16.15■□□□□ 0.18
SCARB1-209ENST00000545305 SIPA1L1O43166 1804 aa16.15■□□□□ 0.18
SCARB1-209ENST00000545305 EGFRP00533 1210 aa16.15■□□□□ 0.18
SCARB1-209ENST00000545305 PDIA3P30101 505 aaKnown RBP16.15■□□□□ 0.18
SCARB1-209ENST00000545305 IFIT1BQ5T764 474 aaKnown RBP16.15■□□□□ 0.18
SCARB1-209ENST00000545305 SH3BP5LQ7L8J4 393 aa16.15■□□□□ 0.18
SCARB1-209ENST00000545305 APOBEC3FQ8IUX4 373 aaKnown RBP16.15■□□□□ 0.18
SCARB1-209ENST00000545305 ENAHQ8N8S7 591 aaPredicted RBP16.15■□□□□ 0.18
SCARB1-209ENST00000545305 SMC3Q9UQE7 1217 aa16.15■□□□□ 0.18
SCARB1-209ENST00000545305 SLC12A7Q9Y666 1083 aa16.15■□□□□ 0.18
SCARB1-209ENST00000545305 GOLGB1Q14789 3259 aaKnown RBP16.15■□□□□ 0.18
SCARB1-209ENST00000545305 PLIN4Q96Q06 1357 aa16.14■□□□□ 0.17
SCARB1-209ENST00000545305 ZBTB43O43298 467 aa16.14■□□□□ 0.17
SCARB1-209ENST00000545305 DHX16O60231 1041 aaKnown RBP16.14■□□□□ 0.17
SCARB1-209ENST00000545305 EPS15P42566 896 aa16.14■□□□□ 0.17
SCARB1-209ENST00000545305 SEC23AQ15436 765 aa16.14■□□□□ 0.17
SCARB1-209ENST00000545305 APOA5Q6Q788 366 aa16.14■□□□□ 0.17
SCARB1-209ENST00000545305 NEDD1Q8NHV4 660 aa16.14■□□□□ 0.17
SCARB1-209ENST00000545305 TRPM4Q8TD43 1214 aa16.14■□□□□ 0.17
SCARB1-209ENST00000545305 CCDC17Q96LX7 622 aa16.14■□□□□ 0.17
SCARB1-209ENST00000545305 ADARB2Q9NS39 739 aaKnown RBP16.14■□□□□ 0.17
SCARB1-209ENST00000545305 TCP11L1Q9NUJ3 509 aa16.14■□□□□ 0.17
SCARB1-209ENST00000545305 HERC5Q9UII4 1024 aaKnown RBP16.14■□□□□ 0.17
SCARB1-209ENST00000545305 HACL1Q9UJ83 578 aa16.14■□□□□ 0.17
SCARB1-209ENST00000545305 BRPF3Q9ULD4 1205 aa16.14■□□□□ 0.17
SCARB1-209ENST00000545305 CIZ1Q9ULV3 898 aaPredicted RBP16.14■□□□□ 0.17
SCARB1-209ENST00000545305 DCAF8L1A6NGE4 600 aa16.13■□□□□ 0.17
SCARB1-209ENST00000545305 GOLGA8AA7E2F4 631 aa16.13■□□□□ 0.17
SCARB1-209ENST00000545305 SHMT1P34896 483 aa16.13■□□□□ 0.17
SCARB1-209ENST00000545305 METAP2P50579 478 aaKnown RBP eCLIP16.13■□□□□ 0.17
SCARB1-209ENST00000545305 RCAN1P53805 252 aa16.13■□□□□ 0.17
SCARB1-209ENST00000545305 CCT2P78371 535 aaKnown RBP16.13■□□□□ 0.17
SCARB1-209ENST00000545305 PPP4R3BQ5MIZ7 849 aa16.13■□□□□ 0.17
SCARB1-209ENST00000545305 CATIPQ7Z7H3 387 aa16.13■□□□□ 0.17
SCARB1-209ENST00000545305 CHMP5Q9NZZ3 219 aa16.13■□□□□ 0.17
SCARB1-209ENST00000545305 CPLX1O14810 134 aa16.12■□□□□ 0.17
SCARB1-209ENST00000545305 NMT2O60551 498 aa16.12■□□□□ 0.17
SCARB1-209ENST00000545305 CALM1P0DP23 149 aa16.12■□□□□ 0.17
SCARB1-209ENST00000545305 CALM2P0DP24 149 aa16.12■□□□□ 0.17
SCARB1-209ENST00000545305 CALM3P0DP25 149 aa16.12■□□□□ 0.17
SCARB1-209ENST00000545305 SCRN1Q12765 414 aa16.12■□□□□ 0.17
SCARB1-209ENST00000545305 RASA3Q14644 834 aa16.12■□□□□ 0.17
SCARB1-209ENST00000545305 CPLX2Q6PUV4 134 aaKnown RBP16.12■□□□□ 0.17
SCARB1-209ENST00000545305 METTL16Q86W50 562 aaKnown RBP16.12■□□□□ 0.17
SCARB1-209ENST00000545305 MICU3Q86XE3 530 aa16.12■□□□□ 0.17
SCARB1-209ENST00000545305 DGKHQ86XP1 1220 aa16.12■□□□□ 0.17
SCARB1-209ENST00000545305 ZNF654Q8IZM8 581 aa16.12■□□□□ 0.17
SCARB1-209ENST00000545305 L3MBTL3Q96JM7 780 aaPredicted RBP16.12■□□□□ 0.17
SCARB1-209ENST00000545305 LLPHQ9BRT6 129 aaKnown RBP16.12■□□□□ 0.17
SCARB1-209ENST00000545305 TMEM39BQ9GZU3 492 aa16.12■□□□□ 0.17
SCARB1-209ENST00000545305 KAT14Q9H8E8 782 aa16.12■□□□□ 0.17
SCARB1-209ENST00000545305 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.12■□□□□ 0.173e-7■■□□□ 13.9
SCARB1-209ENST00000545305 SENP2Q9HC62 589 aa16.12■□□□□ 0.17
SCARB1-209ENST00000545305 FAM196BA6NMK8 535 aa16.11■□□□□ 0.17
SCARB1-209ENST00000545305 MPHOSPH10O00566 681 aaKnown RBP16.11■□□□□ 0.17
SCARB1-209ENST00000545305 DDAH1O94760 285 aa16.11■□□□□ 0.17
SCARB1-209ENST00000545305 AKR1B1P15121 316 aa16.11■□□□□ 0.17
SCARB1-209ENST00000545305 ST3GAL1Q11201 340 aa16.11■□□□□ 0.17
SCARB1-209ENST00000545305 CERKLQ49MI3 558 aaPredicted RBP16.11■□□□□ 0.17
SCARB1-209ENST00000545305 DNAJC18Q9H819 358 aa16.11■□□□□ 0.17
SCARB1-209ENST00000545305 GGA3Q9NZ52 723 aa16.11■□□□□ 0.17
SCARB1-209ENST00000545305 HPS5Q9UPZ3 1129 aa16.11■□□□□ 0.17
SCARB1-209ENST00000545305 NID2Q14112 1375 aa16.11■□□□□ 0.17
SCARB1-209ENST00000545305 GLTPD2A6NH11 291 aa16.1■□□□□ 0.17
SCARB1-209ENST00000545305 CDKL5O76039 1030 aa16.1■□□□□ 0.17
SCARB1-209ENST00000545305 RTN1Q16799 776 aa16.1■□□□□ 0.17
SCARB1-209ENST00000545305 ANGEL2Q5VTE6 544 aaKnown RBP16.1■□□□□ 0.17
SCARB1-209ENST00000545305 TATDN1Q6P1N9 297 aa16.1■□□□□ 0.17
SCARB1-209ENST00000545305 RAB11FIP4Q86YS3 637 aa16.1■□□□□ 0.17
SCARB1-209ENST00000545305 NUP133Q8WUM0 1156 aa16.1■□□□□ 0.17
SCARB1-209ENST00000545305 ANKS1AQ92625 1134 aa16.1■□□□□ 0.17
SCARB1-209ENST00000545305 HOOK2Q96ED9 719 aa16.1■□□□□ 0.17
SCARB1-209ENST00000545305 NCOA5Q9HCD5 579 aaKnown RBP16.1■□□□□ 0.17
SCARB1-209ENST00000545305 STX8Q9UNK0 236 aa16.1■□□□□ 0.17
SCARB1-209ENST00000545305 KIF3AQ9Y496 699 aa16.1■□□□□ 0.17
SCARB1-209ENST00000545305 PPP2R3BQ9Y5P8 575 aa16.1■□□□□ 0.17
SCARB1-209ENST00000545305 ASTN2O75129 1339 aaPredicted RBP16.1■□□□□ 0.17
SCARB1-209ENST00000545305 PITPNM2Q9BZ72 1349 aa16.1■□□□□ 0.17
SCARB1-209ENST00000545305 CCDC196A0A1B0GTZ2 297 aa16.09■□□□□ 0.17
SCARB1-209ENST00000545305 IQCA1LA6NCM1 817 aa16.09■□□□□ 0.17
SCARB1-209ENST00000545305 TBC1D12O60347 775 aa16.09■□□□□ 0.17
SCARB1-209ENST00000545305 GJB2P29033 226 aa16.09■□□□□ 0.17
SCARB1-209ENST00000545305 DDIT3P35638 169 aa16.09■□□□□ 0.17
SCARB1-209ENST00000545305 HMGN5P82970 282 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms