RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 PRKAG2Q9UGJ0 569 aa8.93□□□□□ -0.98
COPA-206ENST00000545266 PPT2Q9UMR5 302 aa8.93□□□□□ -0.98
COPA-206ENST00000545266 GIPRP48546 466 aa8.92□□□□□ -0.98
COPA-206ENST00000545266 DOC2BQ14184 412 aa8.92□□□□□ -0.98
COPA-206ENST00000545266 SLC51AQ86UW1 340 aa8.92□□□□□ -0.98
COPA-206ENST00000545266 TAB3Q8N5C8 712 aaPredicted RBP8.92□□□□□ -0.98
COPA-206ENST00000545266 SRRTQ9BXP5 876 aaKnown RBP8.92□□□□□ -0.98
COPA-206ENST00000545266 FOXQ1Q9C009 403 aa8.92□□□□□ -0.98
COPA-206ENST00000545266 DAGLAQ9Y4D2 1042 aa8.92□□□□□ -0.98
COPA-206ENST00000545266 HMX2A2RU54 273 aa8.91□□□□□ -0.98
COPA-206ENST00000545266 MLECQ14165 292 aa8.91□□□□□ -0.98
COPA-206ENST00000545266 RNF43Q68DV7 783 aa8.91□□□□□ -0.98
COPA-206ENST00000545266 INTS3Q68E01 1043 aaKnown RBP8.91□□□□□ -0.98
COPA-206ENST00000545266 ARMCX6Q7L4S7 300 aa8.91□□□□□ -0.98
COPA-206ENST00000545266 TMEM40Q8WWA1 233 aa8.91□□□□□ -0.98
COPA-206ENST00000545266 ARMC5Q96C12 935 aa8.91□□□□□ -0.98
COPA-206ENST00000545266 KCNF1Q9H3M0 494 aa8.91□□□□□ -0.98
COPA-206ENST00000545266 CNNM2Q9H8M5 875 aa8.91□□□□□ -0.98
COPA-206ENST00000545266 RXRBP28702 533 aa8.9□□□□□ -0.98
COPA-206ENST00000545266 DNAJA1P31689 397 aaKnown RBP8.9□□□□□ -0.98
COPA-206ENST00000545266 YARSP54577 528 aaKnown RBP8.9□□□□□ -0.98
COPA-206ENST00000545266 GPAT2Q6NUI2 795 aa8.9□□□□□ -0.98
COPA-206ENST00000545266 MFSD2AQ8NA29 543 aa8.9□□□□□ -0.98
COPA-206ENST00000545266 OR6P1Q8NGX9 317 aa8.9□□□□□ -0.98
COPA-206ENST00000545266 SREK1Q8WXA9 508 aaKnown RBP8.9□□□□□ -0.98
COPA-206ENST00000545266 ATG4CQ96DT6 458 aa8.9□□□□□ -0.98
COPA-206ENST00000545266 FERD3LQ96RJ6 166 aa8.9□□□□□ -0.98
COPA-206ENST00000545266 SSU72Q9NP77 194 aaKnown RBP8.9□□□□□ -0.98
COPA-206ENST00000545266 UPK3BL1B0FP48 263 aa8.89□□□□□ -0.99
COPA-206ENST00000545266 CHURC1-FNTBB4DL54 471 aa8.89□□□□□ -0.99
COPA-206ENST00000545266 UPK3BL2E5RIL1 263 aa8.89□□□□□ -0.99
COPA-206ENST00000545266 SF3A1Q15459 793 aaKnown RBP8.89□□□□□ -0.99
COPA-206ENST00000545266 NFKBIBQ15653 356 aa8.89□□□□□ -0.99
COPA-206ENST00000545266 PRAMEF13Q5VWM6 474 aa8.89□□□□□ -0.99
COPA-206ENST00000545266 ZAR1Q86SH2 424 aa8.89□□□□□ -0.99
COPA-206ENST00000545266 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.89□□□□□ -0.99
COPA-206ENST00000545266 ANTXR1Q9H6X2 564 aa8.89□□□□□ -0.99
COPA-206ENST00000545266 TNFRSF10CO14798 259 aa8.88□□□□□ -0.99
COPA-206ENST00000545266 EIF6P56537 245 aaKnown RBP8.88□□□□□ -0.99
COPA-206ENST00000545266 OVOS1Q6IE37 1185 aa8.88□□□□□ -0.99
COPA-206ENST00000545266 FAM214BQ7L5A3 538 aa8.88□□□□□ -0.99
COPA-206ENST00000545266 C19orf47Q8N9M1 422 aaKnown RBP8.88□□□□□ -0.99
COPA-206ENST00000545266 TM9SF2Q99805 663 aa8.88□□□□□ -0.99
COPA-206ENST00000545266 PRDM10Q9NQV6 1147 aa8.88□□□□□ -0.99
COPA-206ENST00000545266 GSC2O15499 205 aa8.87□□□□□ -0.99
COPA-206ENST00000545266 DYRK3O43781 588 aa8.87□□□□□ -0.99
COPA-206ENST00000545266 NME1P15531 152 aaKnown RBP8.87□□□□□ -0.99
COPA-206ENST00000545266 ADMP35318 185 aa8.87□□□□□ -0.99
COPA-206ENST00000545266 OGFOD3Q6PK18 319 aa8.87□□□□□ -0.99
COPA-206ENST00000545266 CCDC81Q6ZN84 652 aa8.87□□□□□ -0.99
COPA-206ENST00000545266 NLRC3Q7RTR2 1065 aa8.87□□□□□ -0.99
COPA-206ENST00000545266 LSRQ86X29 649 aaPredicted RBP8.87□□□□□ -0.99
COPA-206ENST00000545266 FAM13CQ8NE31 585 aa8.87□□□□□ -0.99
COPA-206ENST00000545266 PPP1R13LQ8WUF5 828 aa8.87□□□□□ -0.99
COPA-206ENST00000545266 CYB5D2Q8WUJ1 264 aa8.87□□□□□ -0.99
COPA-206ENST00000545266 TANGO6Q9C0B7 1094 aa8.87□□□□□ -0.99
COPA-206ENST00000545266 COL17A1Q9UMD9 1497 aaPredicted RBP8.86□□□□□ -0.99
COPA-206ENST00000545266 RGS13O14921 159 aa8.86□□□□□ -0.99
COPA-206ENST00000545266 SLITRK5O94991 958 aa8.86□□□□□ -0.99
COPA-206ENST00000545266 CCNFP41002 786 aa8.86□□□□□ -0.99
COPA-206ENST00000545266 CASP7P55210 303 aa8.86□□□□□ -0.99
COPA-206ENST00000545266 NFIAQ12857 509 aa8.86□□□□□ -0.99
COPA-206ENST00000545266 CDK5R2Q13319 367 aa8.86□□□□□ -0.99
COPA-206ENST00000545266 DNAJB8Q8NHS0 232 aa8.86□□□□□ -0.99
COPA-206ENST00000545266 DBNDD2Q9BQY9 259 aa8.86□□□□□ -0.99
COPA-206ENST00000545266 DUSP23Q9BVJ7 150 aa8.86□□□□□ -0.99
COPA-206ENST00000545266 ACRP10323 421 aa8.85□□□□□ -0.99
COPA-206ENST00000545266 FSTP19883 344 aa8.85□□□□□ -0.99
COPA-206ENST00000545266 RBL2Q08999 1139 aa8.85□□□□□ -0.99
COPA-206ENST00000545266 ARSHQ5FYA8 562 aa8.85□□□□□ -0.99
COPA-206ENST00000545266 FAM169BQ8N8A8 192 aa8.85□□□□□ -0.99
COPA-206ENST00000545266 GIMAP7Q8NHV1 300 aa8.85□□□□□ -0.99
COPA-206ENST00000545266 CPLX3Q8WVH0 158 aa8.85□□□□□ -0.99
COPA-206ENST00000545266 CRBNQ96SW2 442 aa8.85□□□□□ -0.99
COPA-206ENST00000545266 LGR6Q9HBX8 967 aa8.85□□□□□ -0.99
COPA-206ENST00000545266 KLHL3Q9UH77 587 aa8.85□□□□□ -0.99
COPA-206ENST00000545266 EOMESO95936 686 aa8.84□□□□□ -0.99
COPA-206ENST00000545266 IGLV1-40P01703 118 aa8.84□□□□□ -0.99
COPA-206ENST00000545266 SSBP05455 408 aaKnown RBP eCLIP8.84□□□□□ -0.99
COPA-206ENST00000545266 ATP2B1P20020 1258 aa8.84□□□□□ -0.99
COPA-206ENST00000545266 SHISA5Q8N114 240 aa8.84□□□□□ -0.99
COPA-206ENST00000545266 DRC1Q96MC2 740 aa8.84□□□□□ -0.99
COPA-206ENST00000545266 DPH2Q9BQC3 489 aaPredicted RBP8.84□□□□□ -0.99
COPA-206ENST00000545266 PRKAG3Q9UGI9 489 aa8.84□□□□□ -0.99
COPA-206ENST00000545266 F13BP05160 661 aa8.83□□□□□ -1
COPA-206ENST00000545266 GUCY2CP25092 1073 aa8.83□□□□□ -1
COPA-206ENST00000545266 ETFBP38117 255 aa8.83□□□□□ -1
COPA-206ENST00000545266 CPSF6Q16630 551 aaKnown RBP eCLIP8.83□□□□□ -1
COPA-206ENST00000545266 LETMD1Q6P1Q0 360 aa8.83□□□□□ -1
COPA-206ENST00000545266 CCDC74BQ96LY2 380 aa8.83□□□□□ -1
COPA-206ENST00000545266 TBC1D32Q96NH3 1257 aa8.83□□□□□ -1
COPA-206ENST00000545266 SLC9A7Q96T83 725 aa8.83□□□□□ -1
COPA-206ENST00000545266 ZNF408Q9H9D4 720 aa8.83□□□□□ -1
COPA-206ENST00000545266 CEP131Q9UPN4 1083 aa8.83□□□□□ -1
COPA-206ENST00000545266 LEFTY1O75610 366 aa8.82□□□□□ -1
COPA-206ENST00000545266 UBOX5O94941 541 aa8.82□□□□□ -1
COPA-206ENST00000545266 CYP27A1Q02318 531 aa8.82□□□□□ -1
COPA-206ENST00000545266 FBXW10Q5XX13 1052 aa8.82□□□□□ -1
COPA-206ENST00000545266 RUFY4Q6ZNE9 571 aa8.82□□□□□ -1
COPA-206ENST00000545266 TOP6BLQ8N6T0 577 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms