RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 PRKAB2O43741 272 aa16.47■□□□□ 0.23
TSEN54-203ENST00000545228 CHGBP05060 677 aa16.47■□□□□ 0.23
TSEN54-203ENST00000545228 PDE4BQ07343 736 aa16.47■□□□□ 0.23
TSEN54-203ENST00000545228 IMMTQ16891 758 aaKnown RBP16.47■□□□□ 0.23
TSEN54-203ENST00000545228 CCDC129Q6ZRS4 1044 aa16.47■□□□□ 0.23
TSEN54-203ENST00000545228 ZNF589Q86UQ0 364 aaPredicted RBP16.47■□□□□ 0.23
TSEN54-203ENST00000545228 IFNL1Q8IU54 200 aa16.47■□□□□ 0.23
TSEN54-203ENST00000545228 ANKRD13AQ8IZ07 590 aa16.47■□□□□ 0.23
TSEN54-203ENST00000545228 WNK4Q96J92 1243 aa16.47■□□□□ 0.23
TSEN54-203ENST00000545228 RNF41Q9H4P4 317 aaPredicted RBP16.47■□□□□ 0.23
TSEN54-203ENST00000545228 ROBO3Q96MS0 1386 aa16.47■□□□□ 0.23
TSEN54-203ENST00000545228 SSC5DA1L4H1 1573 aa16.47■□□□□ 0.23
TSEN54-203ENST00000545228 C12orf60Q5U649 245 aa16.46■□□□□ 0.23
TSEN54-203ENST00000545228 RNF20Q5VTR2 975 aa16.46■□□□□ 0.23
TSEN54-203ENST00000545228 CLMNQ96JQ2 1002 aa16.46■□□□□ 0.23
TSEN54-203ENST00000545228 TBC1D2Q9BYX2 928 aa16.46■□□□□ 0.23
TSEN54-203ENST00000545228 ANO2Q9NQ90 1003 aa16.46■□□□□ 0.23
TSEN54-203ENST00000545228 MINDY4BA8MYZ0 360 aa16.45■□□□□ 0.22
TSEN54-203ENST00000545228 ZNF213O14771 459 aa16.45■□□□□ 0.22
TSEN54-203ENST00000545228 MAP3K10Q02779 954 aa16.45■□□□□ 0.22
TSEN54-203ENST00000545228 PPP4R3BQ5MIZ7 849 aa16.45■□□□□ 0.22
TSEN54-203ENST00000545228 CTR9Q6PD62 1173 aa16.45■□□□□ 0.22
TSEN54-203ENST00000545228 METTL16Q86W50 562 aaKnown RBP16.45■□□□□ 0.22
TSEN54-203ENST00000545228 WRNIP1Q96S55 665 aa16.45■□□□□ 0.22
TSEN54-203ENST00000545228 CTNND1O60716 968 aaKnown RBP16.44■□□□□ 0.22
TSEN54-203ENST00000545228 MCCP23508 829 aa16.44■□□□□ 0.22
TSEN54-203ENST00000545228 PPARAQ07869 468 aa16.44■□□□□ 0.22
TSEN54-203ENST00000545228 ZFPM1Q8IX07 1006 aa16.44■□□□□ 0.22
TSEN54-203ENST00000545228 CCDC17Q96LX7 622 aa16.44■□□□□ 0.22
TSEN54-203ENST00000545228 MKNK2Q9HBH9 465 aa16.44■□□□□ 0.22
TSEN54-203ENST00000545228 EPB41L4AQ9HCS5 686 aaPredicted RBP16.44■□□□□ 0.22
TSEN54-203ENST00000545228 CABP5Q9NP86 173 aa16.44■□□□□ 0.22
TSEN54-203ENST00000545228 PICK1Q9NRD5 415 aa16.44■□□□□ 0.22
TSEN54-203ENST00000545228 IGF2BP3O00425 579 aaKnown RBP eCLIP16.43■□□□□ 0.22
TSEN54-203ENST00000545228 USP2O75604 605 aaPredicted RBP16.43■□□□□ 0.22
TSEN54-203ENST00000545228 FGAP02671 866 aa16.43■□□□□ 0.22
TSEN54-203ENST00000545228 ASNSP08243 561 aa16.43■□□□□ 0.22
TSEN54-203ENST00000545228 MAP3K9P80192 1104 aa16.43■□□□□ 0.22
TSEN54-203ENST00000545228 PRPF38BQ5VTL8 546 aaKnown RBP16.43■□□□□ 0.22
TSEN54-203ENST00000545228 OTUD7BQ6GQQ9 843 aa16.43■□□□□ 0.22
TSEN54-203ENST00000545228 C16orf86Q6ZW13 317 aa16.43■□□□□ 0.22
TSEN54-203ENST00000545228 SH3BP5LQ7L8J4 393 aa16.43■□□□□ 0.22
TSEN54-203ENST00000545228 ANAPC4Q9UJX5 808 aa16.43■□□□□ 0.22
TSEN54-203ENST00000545228 TRIM17Q9Y577 477 aa16.43■□□□□ 0.22
TSEN54-203ENST00000545228 TRDNQ13061 729 aa16.42■□□□□ 0.22
TSEN54-203ENST00000545228 CERKLQ49MI3 558 aaPredicted RBP16.42■□□□□ 0.22
TSEN54-203ENST00000545228 NOL9Q5SY16 702 aaKnown RBP16.42■□□□□ 0.22
TSEN54-203ENST00000545228 VPS53Q5VIR6 699 aa16.42■□□□□ 0.22
TSEN54-203ENST00000545228 MIGA2Q7L4E1 593 aa16.42■□□□□ 0.22
TSEN54-203ENST00000545228 ZNF444Q8N0Y2 327 aaPredicted RBP16.42■□□□□ 0.22
TSEN54-203ENST00000545228 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.42■□□□□ 0.22
TSEN54-203ENST00000545228 CNNM2Q9H8M5 875 aa16.42■□□□□ 0.22
TSEN54-203ENST00000545228 AS3MTQ9HBK9 375 aa16.42■□□□□ 0.22
TSEN54-203ENST00000545228 ZNF112Q9UJU3 913 aa16.42■□□□□ 0.22
TSEN54-203ENST00000545228 ZKSCAN1P17029 563 aaPredicted RBP16.41■□□□□ 0.22
TSEN54-203ENST00000545228 PLCD1P51178 756 aa16.41■□□□□ 0.22
TSEN54-203ENST00000545228 GABPAQ06546 454 aa16.41■□□□□ 0.22
TSEN54-203ENST00000545228 SLC4A8Q2Y0W8 1093 aa16.41■□□□□ 0.22
TSEN54-203ENST00000545228 TATDN1Q6P1N9 297 aa16.41■□□□□ 0.22
TSEN54-203ENST00000545228 SCYL3Q8IZE3 742 aa16.41■□□□□ 0.22
TSEN54-203ENST00000545228 MAP4K1Q92918 833 aa16.41■□□□□ 0.22
TSEN54-203ENST00000545228 GJA5P36382 358 aa16.4■□□□□ 0.22
TSEN54-203ENST00000545228 CAP2P40123 477 aa16.4■□□□□ 0.22
TSEN54-203ENST00000545228 CDK8P49336 464 aa16.4■□□□□ 0.22
TSEN54-203ENST00000545228 MFSD6Q6ZSS7 791 aa16.4■□□□□ 0.22
TSEN54-203ENST00000545228 OTOP1Q7RTM1 612 aa16.4■□□□□ 0.22
TSEN54-203ENST00000545228 CDAN1Q8IWY9 1227 aa16.4■□□□□ 0.22
TSEN54-203ENST00000545228 ERO1AQ96HE7 468 aa16.4■□□□□ 0.22
TSEN54-203ENST00000545228 UPF2Q9HAU5 1272 aaKnown RBP16.4■□□□□ 0.22
TSEN54-203ENST00000545228 CRHR2Q13324 411 aa16.39■□□□□ 0.21
TSEN54-203ENST00000545228 KRT32Q14532 448 aa16.39■□□□□ 0.21
TSEN54-203ENST00000545228 ABCB5Q2M3G0 1257 aa16.39■□□□□ 0.21
TSEN54-203ENST00000545228 CCDC178Q5BJE1 867 aa16.39■□□□□ 0.21
TSEN54-203ENST00000545228 AKNAD1Q5T1N1 836 aa16.39■□□□□ 0.21
TSEN54-203ENST00000545228 TMEM179Q6ZVK1 233 aa16.39■□□□□ 0.21
TSEN54-203ENST00000545228 ERO1BQ86YB8 467 aa16.39■□□□□ 0.21
TSEN54-203ENST00000545228 STAG1Q8WVM7 1258 aa16.39■□□□□ 0.21
TSEN54-203ENST00000545228 OPTNQ96CV9 577 aa16.39■□□□□ 0.21
TSEN54-203ENST00000545228 KRT23Q9C075 422 aa16.39■□□□□ 0.21
TSEN54-203ENST00000545228 SH2D4AQ9H788 454 aa16.39■□□□□ 0.21
TSEN54-203ENST00000545228 ELP3Q9H9T3 547 aa16.39■□□□□ 0.21
TSEN54-203ENST00000545228 TOMM22Q9NS69 142 aa16.39■□□□□ 0.21
TSEN54-203ENST00000545228 RBM8AQ9Y5S9 174 aaKnown RBP16.39■□□□□ 0.21
TSEN54-203ENST00000545228 TNRC18O15417 2968 aaPredicted RBP16.38■□□□□ 0.21
TSEN54-203ENST00000545228 PDE4DIPQ5VU43 2346 aa16.38■□□□□ 0.21
TSEN54-203ENST00000545228 TESPA1A2RU30 521 aaPredicted RBP16.38■□□□□ 0.21
TSEN54-203ENST00000545228 MPHOSPH10O00566 681 aaKnown RBP16.38■□□□□ 0.21
TSEN54-203ENST00000545228 FOXP2O15409 715 aa16.38■□□□□ 0.21
TSEN54-203ENST00000545228 ORC4O43929 436 aa16.38■□□□□ 0.21
TSEN54-203ENST00000545228 CYP2D6P10635 497 aa16.38■□□□□ 0.21
TSEN54-203ENST00000545228 PPATQ06203 517 aa16.38■□□□□ 0.21
TSEN54-203ENST00000545228 VGLL4Q14135 290 aa16.38■□□□□ 0.21
TSEN54-203ENST00000545228 RALYLQ86SE5 291 aaKnown RBP16.38■□□□□ 0.21
TSEN54-203ENST00000545228 ESR2Q92731 530 aa16.38■□□□□ 0.21
TSEN54-203ENST00000545228 LSG1Q9H089 658 aaKnown RBP16.38■□□□□ 0.21
TSEN54-203ENST00000545228 PCDH10Q9P2E7 1040 aa16.38■□□□□ 0.21
TSEN54-203ENST00000545228 MYH4Q9Y623 1939 aa16.38■□□□□ 0.21
TSEN54-203ENST00000545228 CYP2D7A0A087X1C5 515 aa16.37■□□□□ 0.21
TSEN54-203ENST00000545228 TSPY2A6NKD2 308 aa16.37■□□□□ 0.21
TSEN54-203ENST00000545228 USP17L5A8MUK1 530 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms