RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 GOLGA8AA7E2F4 631 aa13.29□□□□□ -0.28
TNC-213ENST00000544972 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
TNC-213ENST00000544972 IFIT1BQ5T764 474 aaKnown RBP13.29□□□□□ -0.28
TNC-213ENST00000544972 CDC37L1Q7L3B6 337 aa13.29□□□□□ -0.28
TNC-213ENST00000544972 TTC6Q86TZ1 520 aa13.29□□□□□ -0.28
TNC-213ENST00000544972 AGBL3Q8NEM8 1001 aa13.29□□□□□ -0.28
TNC-213ENST00000544972 JDP2Q8WYK2 163 aa13.29□□□□□ -0.28
TNC-213ENST00000544972 TDRD3Q9H7E2 651 aaKnown RBP13.29□□□□□ -0.28
TNC-213ENST00000544972 SIPA1L1O43166 1804 aa13.29□□□□□ -0.28
TNC-213ENST00000544972 VPS37CA5D8V6 355 aaPredicted RBP13.28□□□□□ -0.28
TNC-213ENST00000544972 DDX11L8A8MPP1 907 aa13.28□□□□□ -0.28
TNC-213ENST00000544972 CPLX1O14810 134 aa13.28□□□□□ -0.28
TNC-213ENST00000544972 TROAPQ12815 778 aa13.28□□□□□ -0.28
TNC-213ENST00000544972 CIAPIN1Q6FI81 312 aa13.28□□□□□ -0.28
TNC-213ENST00000544972 SYNE3Q6ZMZ3 975 aa13.28□□□□□ -0.28
TNC-213ENST00000544972 ZNF444Q8N0Y2 327 aaPredicted RBP13.28□□□□□ -0.28
TNC-213ENST00000544972 FAM184AQ8NB25 1140 aa13.28□□□□□ -0.28
TNC-213ENST00000544972 FHDC1Q9C0D6 1143 aaPredicted RBP13.28□□□□□ -0.28
TNC-213ENST00000544972 ZNF287Q9HBT7 754 aa13.28□□□□□ -0.28
TNC-213ENST00000544972 TCP11L1Q9NUJ3 509 aa13.28□□□□□ -0.28
TNC-213ENST00000544972 TCHHQ07283 1943 aa13.28□□□□□ -0.28
TNC-213ENST00000544972 SPDYE2BA6NHP3 402 aa13.27□□□□□ -0.28
TNC-213ENST00000544972 SPDYE6P0CI01 402 aa13.27□□□□□ -0.28
TNC-213ENST00000544972 MCTP1Q6DN14 999 aa13.27□□□□□ -0.28
TNC-213ENST00000544972 FANCBQ8NB91 859 aa13.27□□□□□ -0.28
TNC-213ENST00000544972 ANKS1AQ92625 1134 aa13.27□□□□□ -0.28
TNC-213ENST00000544972 DDTLA6NHG4 134 aaPredicted RBP13.27□□□□□ -0.29
TNC-213ENST00000544972 TSPY3P0CV98 308 aa13.27□□□□□ -0.29
TNC-213ENST00000544972 TSPY8P0CW00 308 aa13.27□□□□□ -0.29
TNC-213ENST00000544972 TCP10Q12799 353 aa13.27□□□□□ -0.29
TNC-213ENST00000544972 RTN1Q16799 776 aa13.27□□□□□ -0.29
TNC-213ENST00000544972 SH3BP5LQ7L8J4 393 aa13.27□□□□□ -0.29
TNC-213ENST00000544972 DGKHQ86XP1 1220 aa13.27□□□□□ -0.29
TNC-213ENST00000544972 NUP133Q8WUM0 1156 aa13.27□□□□□ -0.29
TNC-213ENST00000544972 ORC3Q9UBD5 711 aaPredicted RBP13.27□□□□□ -0.29
TNC-213ENST00000544972 SERPINB13Q9UIV8 391 aa13.27□□□□□ -0.29
TNC-213ENST00000544972 HDAC9Q9UKV0 1011 aa13.27□□□□□ -0.29
TNC-213ENST00000544972 MYH8P13535 1937 aa13.26□□□□□ -0.29
TNC-213ENST00000544972 FZD9O00144 591 aa13.26□□□□□ -0.29
TNC-213ENST00000544972 SLURP2P0DP57 97 aa13.26□□□□□ -0.29
TNC-213ENST00000544972 FOXD4L6Q3SYB3 417 aaPredicted RBP13.26□□□□□ -0.29
TNC-213ENST00000544972 FOXD4L3Q6VB84 417 aaPredicted RBP13.26□□□□□ -0.29
TNC-213ENST00000544972 OGFOD1Q8N543 542 aa13.26□□□□□ -0.29
TNC-213ENST00000544972 MTMR14Q8NCE2 650 aa13.26□□□□□ -0.29
TNC-213ENST00000544972 NEDD1Q8NHV4 660 aa13.26□□□□□ -0.29
TNC-213ENST00000544972 PHKBQ93100 1093 aa13.26□□□□□ -0.29
TNC-213ENST00000544972 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.26□□□□□ -0.29
TNC-213ENST00000544972 EHD4Q9H223 541 aa13.26□□□□□ -0.29
TNC-213ENST00000544972 DHX36Q9H2U1 1008 aaKnown RBP13.26□□□□□ -0.29
TNC-213ENST00000544972 KIF3AQ9Y496 699 aa13.26□□□□□ -0.29
TNC-213ENST00000544972 CDKL5O76039 1030 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 DDAH1O94760 285 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 IFNAR1P17181 557 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 SHMT1P34896 483 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 CATIPQ7Z7H3 387 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 NBPF11Q86T75 865 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 FERMT3Q86UX7 667 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 ZBED3Q96IU2 234 aaPredicted RBP13.25□□□□□ -0.29
TNC-213ENST00000544972 DNAJC18Q9H819 358 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 UTRNP46939 3433 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 ATRNL1Q5VV63 1379 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 PLIN4Q96Q06 1357 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 SHTN1A0MZ66 631 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 ENTPD3O75355 529 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 NOVP48745 357 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 TNIP1Q15025 636 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 PPP2R5BQ15173 497 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 DLGAP5Q15398 846 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 CCDC178Q5BJE1 867 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 CPLX2Q6PUV4 134 aaKnown RBP13.25□□□□□ -0.29
TNC-213ENST00000544972 LMBRD1Q9NUN5 540 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 SWAP70Q9UH65 585 aa13.25□□□□□ -0.29
TNC-213ENST00000544972 UBE2Q2LH0YL09 131 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 GOLGA6L22H0YM25 854 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 H3BQV1 296 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 FMNL1O95466 1100 aaPredicted RBP13.24□□□□□ -0.29
TNC-213ENST00000544972 HLA-DOAP06340 250 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 CALM1P0DP23 149 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 CALM2P0DP24 149 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 CALM3P0DP25 149 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 FOSBP53539 338 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 FUT2Q10981 343 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 RESTQ13127 1097 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 SPDYE2Q495Y8 402 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 IFFO2Q5TF58 517 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 CMTR1Q8N1G2 835 aaKnown RBP13.24□□□□□ -0.29
TNC-213ENST00000544972 CRACR2BQ8N4Y2 399 aaPredicted RBP13.24□□□□□ -0.29
TNC-213ENST00000544972 AIFM3Q96NN9 605 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 SYT17Q9BSW7 474 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 PI4KBQ9UBF8 816 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 ZNF70Q9UC06 446 aaPredicted RBP13.24□□□□□ -0.29
TNC-213ENST00000544972 ATP6V1DQ9Y5K8 247 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 GREB1LQ9C091 1923 aaPredicted RBP13.24□□□□□ -0.29
TNC-213ENST00000544972 COL2A1P02458 1487 aaPredicted RBP13.24□□□□□ -0.29
TNC-213ENST00000544972 STK36Q9NRP7 1315 aa13.24□□□□□ -0.29
TNC-213ENST00000544972 CLRN2A0PK11 232 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 AKR1B1P15121 316 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 ZNF280AP59817 542 aaPredicted RBP13.23□□□□□ -0.29
TNC-213ENST00000544972 FAM173BQ6P4H8 233 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms