RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 PIH1D3Q9NQM4 214 aaKnown RBP15.14■□□□□ 0.01
ACTN1-206ENST00000544964 HERC5Q9UII4 1024 aaKnown RBP15.14■□□□□ 0.01
ACTN1-206ENST00000544964 LAMA3Q16787 3333 aa15.14■□□□□ 0.01
ACTN1-206ENST00000544964 ELNP15502 786 aa15.13■□□□□ 0.01
ACTN1-206ENST00000544964 ZAP70P43403 619 aa15.13■□□□□ 0.01
ACTN1-206ENST00000544964 HMGCS2P54868 508 aa15.13■□□□□ 0.01
ACTN1-206ENST00000544964 PPP4CP60510 307 aa15.13■□□□□ 0.01
ACTN1-206ENST00000544964 JAG1P78504 1218 aa15.13■□□□□ 0.01
ACTN1-206ENST00000544964 FAM110CQ1W6H9 321 aa15.13■□□□□ 0.01
ACTN1-206ENST00000544964 SHROOM1Q2M3G4 852 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-206ENST00000544964 CCDC158Q5M9N0 1113 aa15.13■□□□□ 0.01
ACTN1-206ENST00000544964 METTL16Q86W50 562 aaKnown RBP15.13■□□□□ 0.01
ACTN1-206ENST00000544964 CHD1LQ86WJ1 897 aa15.13■□□□□ 0.01
ACTN1-206ENST00000544964 MAPKAPK5Q8IW41 473 aa15.13■□□□□ 0.01
ACTN1-206ENST00000544964 ANKRD13CQ8N6S4 541 aa15.13■□□□□ 0.01
ACTN1-206ENST00000544964 ZNF280CQ8ND82 737 aa15.13■□□□□ 0.01
ACTN1-206ENST00000544964 NAV1Q8NEY1 1877 aa15.12■□□□□ 0.01
ACTN1-206ENST00000544964 H0YGN5 161 aa15.12■□□□□ 0.01
ACTN1-206ENST00000544964 TNPO2O14787 897 aaKnown RBP15.12■□□□□ 0.01
ACTN1-206ENST00000544964 ADCY3O60266 1144 aa15.12■□□□□ 0.01
ACTN1-206ENST00000544964 PLCG2P16885 1265 aa15.12■□□□□ 0.01
ACTN1-206ENST00000544964 IRF5Q13568 498 aa15.12■□□□□ 0.01
ACTN1-206ENST00000544964 SH3D19Q5HYK7 790 aa15.12■□□□□ 0.01
ACTN1-206ENST00000544964 CENPQQ7L2Z9 268 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-206ENST00000544964 TGFBRAP1Q8WUH2 860 aa15.12■□□□□ 0.01
ACTN1-206ENST00000544964 TBC1D2Q9BYX2 928 aa15.12■□□□□ 0.01
ACTN1-206ENST00000544964 RNF208Q9H0X6 261 aa15.12■□□□□ 0.01
ACTN1-206ENST00000544964 UNC93B1Q9H1C4 597 aa15.12■□□□□ 0.01
ACTN1-206ENST00000544964 DHX36Q9H2U1 1008 aaKnown RBP15.12■□□□□ 0.01
ACTN1-206ENST00000544964 PI4KBQ9UBF8 816 aa15.12■□□□□ 0.01
ACTN1-206ENST00000544964 PNMA3Q9UL41 463 aa15.12■□□□□ 0.01
ACTN1-206ENST00000544964 USP17L5A8MUK1 530 aa15.11■□□□□ 0.01
ACTN1-206ENST00000544964 BAG3O95817 575 aa15.11■□□□□ 0.01
ACTN1-206ENST00000544964 INHAP05111 366 aa15.11■□□□□ 0.01
ACTN1-206ENST00000544964 UBXN2AP68543 259 aa15.11■□□□□ 0.01
ACTN1-206ENST00000544964 NKX2-3Q8TAU0 364 aa15.11■□□□□ 0.01
ACTN1-206ENST00000544964 PXYLP1Q8TE99 480 aa15.11■□□□□ 0.01
ACTN1-206ENST00000544964 U2AF1L4Q8WU68 220 aaKnown RBP15.11■□□□□ 0.01
ACTN1-206ENST00000544964 NOL10Q9BSC4 688 aaKnown RBP15.11■□□□□ 0.01
ACTN1-206ENST00000544964 ASCC2Q9H1I8 757 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-206ENST00000544964 FXR1P51114 621 aaKnown RBP eCLIP15.1■□□□□ 0.01
ACTN1-206ENST00000544964 DYNLL1P63167 89 aaKnown RBP15.1■□□□□ 0.01
ACTN1-206ENST00000544964 MTMR2Q13614 643 aa15.1■□□□□ 0.01
ACTN1-206ENST00000544964 TSHZ3Q63HK5 1081 aa15.1■□□□□ 0.01
ACTN1-206ENST00000544964 WDR18Q9BV38 432 aa15.1■□□□□ 0.01
ACTN1-206ENST00000544964 BIN2Q9UBW5 565 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-206ENST00000544964 PALD1Q9ULE6 856 aa15.1■□□□□ 0.01
ACTN1-206ENST00000544964 COLQQ9Y215 455 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-206ENST00000544964 IGSF3O75054 1194 aa15.09■□□□□ 0.01
ACTN1-206ENST00000544964 ASNSP08243 561 aa15.09■□□□□ 0.01
ACTN1-206ENST00000544964 GCLCP48506 637 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-206ENST00000544964 PAK6Q9NQU5 681 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-206ENST00000544964 ECHDC1Q9NTX5 307 aa15.09■□□□□ 0.01
ACTN1-206ENST00000544964 SAP30BPQ9UHR5 308 aaKnown RBP15.09■□□□□ 0.01
ACTN1-206ENST00000544964 ZBTB21Q9ULJ3 1066 aa15.09■□□□□ 0.01
ACTN1-206ENST00000544964 NDUFB9Q9Y6M9 179 aa15.09■□□□□ 0.01
ACTN1-206ENST00000544964 FARP2O94887 1054 aaPredicted RBP15.08■□□□□ 0
ACTN1-206ENST00000544964 GDF11O95390 407 aa15.08■□□□□ 0
ACTN1-206ENST00000544964 MX1P20591 662 aa15.08■□□□□ 0
ACTN1-206ENST00000544964 CYP7A1P22680 504 aa15.08■□□□□ 0
ACTN1-206ENST00000544964 PDE4AP27815 886 aa15.08■□□□□ 0
ACTN1-206ENST00000544964 BACE1P56817 501 aa15.08■□□□□ 0
ACTN1-206ENST00000544964 ANTXR1Q9H6X2 564 aa15.08■□□□□ 0
ACTN1-206ENST00000544964 AS3MTQ9HBK9 375 aa15.08■□□□□ 0
ACTN1-206ENST00000544964 MORF4L1Q9UBU8 362 aa15.08■□□□□ 0
ACTN1-206ENST00000544964 SALL3Q9BXA9 1300 aa15.08■□□□□ 0
ACTN1-206ENST00000544964 PEX10O60683 326 aa15.07■□□□□ 0
ACTN1-206ENST00000544964 IDH1O75874 414 aaKnown RBP15.07■□□□□ 0
ACTN1-206ENST00000544964 SGPL1O95470 568 aa15.07■□□□□ 0
ACTN1-206ENST00000544964 ATP5JP18859 108 aa15.07■□□□□ 0
ACTN1-206ENST00000544964 PABPC4Q13310 644 aaKnown RBP eCLIP15.07■□□□□ 0
ACTN1-206ENST00000544964 SKAP1Q86WV1 359 aa15.07■□□□□ 0
ACTN1-206ENST00000544964 MIGA1Q8NAN2 632 aa15.07■□□□□ 0
ACTN1-206ENST00000544964 COA7Q96BR5 231 aa15.07■□□□□ 0
ACTN1-206ENST00000544964 GPATCH3Q96I76 525 aa15.07■□□□□ 0
ACTN1-206ENST00000544964 DNAJC2Q99543 621 aaKnown RBP15.07■□□□□ 0
ACTN1-206ENST00000544964 BOLA2Q9H3K6 86 aa15.07■□□□□ 0
ACTN1-206ENST00000544964 HOXA7P31268 230 aaPredicted RBP15.06■□□□□ 0
ACTN1-206ENST00000544964 POTEEQ6S8J3 1075 aa15.06■□□□□ 0
ACTN1-206ENST00000544964 FOXP4Q8IVH2 680 aaPredicted RBP15.06■□□□□ 0
ACTN1-206ENST00000544964 CRACR2BQ8N4Y2 399 aaPredicted RBP15.06■□□□□ 0
ACTN1-206ENST00000544964 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.06■□□□□ 0
ACTN1-206ENST00000544964 DEFB118Q96PH6 123 aa15.06■□□□□ 0
ACTN1-206ENST00000544964 CRISPLD2Q9H0B8 497 aa15.06■□□□□ 0
ACTN1-206ENST00000544964 TXNRD2Q9NNW7 524 aa15.06■□□□□ 0
ACTN1-206ENST00000544964 GJD2Q9UKL4 321 aa15.06■□□□□ 0
ACTN1-206ENST00000544964 GTF3C3Q9Y5Q9 886 aa15.06■□□□□ 0
ACTN1-206ENST00000544964 FRMPD3Q5JV73 1810 aa15.06■□□□□ 0
ACTN1-206ENST00000544964 PDE1AP54750 535 aa15.05■□□□□ -0
ACTN1-206ENST00000544964 IRX3P78415 501 aaPredicted RBP15.05■□□□□ -0
ACTN1-206ENST00000544964 CHRDL2Q6WN34 429 aa15.05■□□□□ -0
ACTN1-206ENST00000544964 PLEKHM2Q8IWE5 1019 aa15.05■□□□□ -0
ACTN1-206ENST00000544964 MAGEB6Q8N7X4 407 aa15.05■□□□□ -0
ACTN1-206ENST00000544964 PI4K2BQ8TCG2 481 aa15.05■□□□□ -0
ACTN1-206ENST00000544964 EDC3Q96F86 508 aaKnown RBP15.05■□□□□ -0
ACTN1-206ENST00000544964 PRO3102Q9H379 93 aa15.05■□□□□ -0
ACTN1-206ENST00000544964 GINM1Q9NU53 330 aa15.05■□□□□ -0
ACTN1-206ENST00000544964 TMOD4Q9NZQ9 345 aa15.05■□□□□ -0
ACTN1-206ENST00000544964 STAP2Q9UGK3 403 aa15.05■□□□□ -0
ACTN1-206ENST00000544964 TAOK2Q9UL54 1235 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms