RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 IFIT1BQ5T764 474 aaKnown RBP14.89□□□□□ -0.03
CPSF7-223ENST00000544669 SPATA20Q8TB22 786 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 NUP133Q8WUM0 1156 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 CLIC6Q96NY7 704 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 GSDMAQ96QA5 445 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 NAA15Q9BXJ9 866 aaKnown RBP14.89□□□□□ -0.03
CPSF7-223ENST00000544669 SENP2Q9HC62 589 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 SEC31BQ9NQW1 1179 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 STRCQ7RTU9 1775 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 TNKSO95271 1327 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.89□□□□□ -0.03
CPSF7-223ENST00000544669 POLR2DO15514 142 aaKnown RBP14.89□□□□□ -0.03
CPSF7-223ENST00000544669 TOB1P50616 345 aaPredicted RBP14.89□□□□□ -0.03
CPSF7-223ENST00000544669 FILIP1LQ4L180 1135 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 SLC10A5Q5PT55 438 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 SPECC1LQ69YQ0 1117 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 MYL10Q9BUA6 226 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 ZMYND15Q9H091 742 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 ATP8A2Q9NTI2 1148 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 FANCLQ9NW38 375 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 ARGLU1Q9NWB6 273 aaPredicted RBP14.89□□□□□ -0.03
CPSF7-223ENST00000544669 MAN1B1Q9UKM7 699 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 SPATA31A1Q5TZJ5 1347 aa14.88□□□□□ -0.03
CPSF7-223ENST00000544669 USP27XA6NNY8 438 aa14.88□□□□□ -0.03
CPSF7-223ENST00000544669 MINDY4BA8MYZ0 360 aa14.88□□□□□ -0.03
CPSF7-223ENST00000544669 PRKAB2O43741 272 aa14.88□□□□□ -0.03
CPSF7-223ENST00000544669 ORC4O43929 436 aa14.88□□□□□ -0.03
CPSF7-223ENST00000544669 SLFN14P0C7P3 912 aa14.88□□□□□ -0.03
CPSF7-223ENST00000544669 KIF5BP33176 963 aa14.88□□□□□ -0.03
CPSF7-223ENST00000544669 PLCD1P51178 756 aa14.88□□□□□ -0.03
CPSF7-223ENST00000544669 SPTY2D1Q68D10 685 aaPredicted RBP14.88□□□□□ -0.03
CPSF7-223ENST00000544669 BARGINQ6ZT62 677 aa14.88□□□□□ -0.03
CPSF7-223ENST00000544669 CTCFLQ8NI51 663 aaPredicted RBP14.88□□□□□ -0.03
CPSF7-223ENST00000544669 TSC1Q92574 1164 aa14.88□□□□□ -0.03
CPSF7-223ENST00000544669 PHF20Q9BVI0 1012 aa14.88□□□□□ -0.03
CPSF7-223ENST00000544669 RREB1Q92766 1687 aa14.88□□□□□ -0.03
CPSF7-223ENST00000544669 TUBB2AQ13885 445 aa14.87□□□□□ -0.03
CPSF7-223ENST00000544669 CERS3Q8IU89 383 aa14.87□□□□□ -0.03
CPSF7-223ENST00000544669 CREBRFQ8IUR6 639 aa14.87□□□□□ -0.03
CPSF7-223ENST00000544669 TUBB2BQ9BVA1 445 aa14.87□□□□□ -0.03
CPSF7-223ENST00000544669 CRNKL1Q9BZJ0 848 aaKnown RBP14.87□□□□□ -0.03
CPSF7-223ENST00000544669 HSD3B7Q9H2F3 369 aa14.87□□□□□ -0.03
CPSF7-223ENST00000544669 CABP5Q9NP86 173 aa14.87□□□□□ -0.03
CPSF7-223ENST00000544669 ABCF2Q9UG63 623 aa14.87□□□□□ -0.03
CPSF7-223ENST00000544669 A0A087WWV3 80 aa14.87□□□□□ -0.03
CPSF7-223ENST00000544669 CALML3P27482 149 aa14.87□□□□□ -0.03
CPSF7-223ENST00000544669 PDE4BQ07343 736 aa14.87□□□□□ -0.03
CPSF7-223ENST00000544669 RIOK1Q9BRS2 568 aaKnown RBP14.87□□□□□ -0.03
CPSF7-223ENST00000544669 ARPP21Q9UBL0 812 aaPredicted RBP14.87□□□□□ -0.03
CPSF7-223ENST00000544669 SERTAD1Q9UHV2 236 aa14.87□□□□□ -0.03
CPSF7-223ENST00000544669 DDX41Q9UJV9 622 aaKnown RBP14.87□□□□□ -0.03
CPSF7-223ENST00000544669 ZNF215Q9UL58 517 aaPredicted RBP14.87□□□□□ -0.03
CPSF7-223ENST00000544669 KCNJ14Q9UNX9 436 aa14.87□□□□□ -0.03
CPSF7-223ENST00000544669 AHDC1Q5TGY3 1603 aaPredicted RBP14.87□□□□□ -0.03
CPSF7-223ENST00000544669 LAMB2P55268 1798 aa14.86□□□□□ -0.03
CPSF7-223ENST00000544669 ATP1A3P13637 1013 aa14.86□□□□□ -0.03
CPSF7-223ENST00000544669 ZNF18P17022 549 aa14.86□□□□□ -0.03
CPSF7-223ENST00000544669 GABPB1Q06547 395 aaPredicted RBP14.86□□□□□ -0.03
CPSF7-223ENST00000544669 SPAG1Q07617 926 aa14.86□□□□□ -0.03
CPSF7-223ENST00000544669 TBX2Q13207 712 aaPredicted RBP14.86□□□□□ -0.03
CPSF7-223ENST00000544669 SBK1Q52WX2 424 aa14.86□□□□□ -0.03
CPSF7-223ENST00000544669 SPATA1Q5VX52 437 aa14.86□□□□□ -0.03
CPSF7-223ENST00000544669 FOXP4Q8IVH2 680 aaPredicted RBP14.86□□□□□ -0.03
CPSF7-223ENST00000544669 MIGA1Q8NAN2 632 aa14.86□□□□□ -0.03
CPSF7-223ENST00000544669 ANKRD20A12PQ8NF67 263 aa14.86□□□□□ -0.03
CPSF7-223ENST00000544669 CCDC51Q96ER9 411 aa14.86□□□□□ -0.03
CPSF7-223ENST00000544669 BAG1Q99933 345 aaPredicted RBP14.86□□□□□ -0.03
CPSF7-223ENST00000544669 RMND1Q9NWS8 449 aa14.86□□□□□ -0.03
CPSF7-223ENST00000544669 NFE2L3Q9Y4A8 694 aa14.86□□□□□ -0.03
CPSF7-223ENST00000544669 GUCY1A2P33402 732 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 GNAQP50148 359 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 CCDC93Q567U6 631 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 AEBP2Q6ZN18 517 aaPredicted RBP14.85□□□□□ -0.03
CPSF7-223ENST00000544669 IQUBQ8NA54 791 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 PANX2Q96RD6 677 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 SH3GLB2Q9NR46 395 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 PCDHB6Q9Y5E3 794 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.85□□□□□ -0.034e-11■■□□□ 12.6
CPSF7-223ENST00000544669 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.85□□□□□ -0.03
CPSF7-223ENST00000544669 BCL9LQ86UU0 1499 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 BCORQ6W2J9 1755 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 ACTN4O43707 911 aaKnown RBP14.85□□□□□ -0.03
CPSF7-223ENST00000544669 TXLNAP40222 546 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 ARL6IP4Q66PJ3 421 aaKnown RBP14.85□□□□□ -0.03
CPSF7-223ENST00000544669 ISM2Q6H9L7 571 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 GALNT17Q6IS24 598 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 SYT10Q6XYQ8 523 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 FBXO33Q7Z6M2 555 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 AMOTL1Q8IY63 956 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 ENAHQ8N8S7 591 aaPredicted RBP14.85□□□□□ -0.03
CPSF7-223ENST00000544669 ZKSCAN3Q9BRR0 538 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 CSRNP2Q9H175 543 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 INCENPQ9NQS7 918 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 DNAI1Q9UI46 699 aa14.85□□□□□ -0.03
CPSF7-223ENST00000544669 FAM177BA6PVY3 158 aa14.84□□□□□ -0.03
CPSF7-223ENST00000544669 ATP8B1O43520 1251 aa14.84□□□□□ -0.03
CPSF7-223ENST00000544669 CBX1P83916 185 aa14.84□□□□□ -0.03
CPSF7-223ENST00000544669 DMTNQ08495 405 aa14.84□□□□□ -0.03
CPSF7-223ENST00000544669 BMS1Q14692 1282 aaKnown RBP14.84□□□□□ -0.03
CPSF7-223ENST00000544669 TMTC3Q6ZXV5 915 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms