RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 ARMT1Q9H993 441 aa16.79■□□□□ 0.28
VAMP1-208ENST00000544432 PTPRFP10586 1907 aa16.78■□□□□ 0.28
VAMP1-208ENST00000544432 MYH1P12882 1939 aa16.78■□□□□ 0.28
VAMP1-208ENST00000544432 CYP2C8P10632 490 aa16.78■□□□□ 0.28
VAMP1-208ENST00000544432 HMGCS2P54868 508 aa16.78■□□□□ 0.28
VAMP1-208ENST00000544432 CERKLQ49MI3 558 aaPredicted RBP16.78■□□□□ 0.28
VAMP1-208ENST00000544432 SDR42E1Q8WUS8 393 aa16.78■□□□□ 0.28
VAMP1-208ENST00000544432 MCM9Q9NXL9 1143 aa16.78■□□□□ 0.28
VAMP1-208ENST00000544432 PNMA3Q9UL41 463 aa16.78■□□□□ 0.28
VAMP1-208ENST00000544432 USP17L10C9JJH3 530 aa16.77■□□□□ 0.28
VAMP1-208ENST00000544432 GLRX3O76003 335 aaKnown RBP16.77■□□□□ 0.28
VAMP1-208ENST00000544432 GDF11O95390 407 aa16.77■□□□□ 0.28
VAMP1-208ENST00000544432 ZFYP08048 801 aaPredicted RBP16.77■□□□□ 0.28
VAMP1-208ENST00000544432 SHMT1P34896 483 aa16.77■□□□□ 0.28
VAMP1-208ENST00000544432 SLC4A8Q2Y0W8 1093 aa16.77■□□□□ 0.28
VAMP1-208ENST00000544432 SLFNL1Q499Z3 407 aa16.77■□□□□ 0.28
VAMP1-208ENST00000544432 TREML2Q5T2D2 321 aa16.77■□□□□ 0.28
VAMP1-208ENST00000544432 ARMC5Q96C12 935 aa16.77■□□□□ 0.28
VAMP1-208ENST00000544432 ARHGAP39Q9C0H5 1083 aa16.77■□□□□ 0.28
VAMP1-208ENST00000544432 ATAD5Q96QE3 1844 aa16.76■□□□□ 0.27
VAMP1-208ENST00000544432 GH2P01242 217 aa16.76■□□□□ 0.27
VAMP1-208ENST00000544432 CHGBP05060 677 aa16.76■□□□□ 0.27
VAMP1-208ENST00000544432 HOXD10P28358 340 aa16.76■□□□□ 0.27
VAMP1-208ENST00000544432 HOXA7P31268 230 aaPredicted RBP16.76■□□□□ 0.27
VAMP1-208ENST00000544432 PSMC4P43686 418 aa16.76■□□□□ 0.27
VAMP1-208ENST00000544432 LRRFIP1Q32MZ4 808 aaKnown RBP16.76■□□□□ 0.27
VAMP1-208ENST00000544432 PI4K2BQ8TCG2 481 aa16.76■□□□□ 0.27
VAMP1-208ENST00000544432 PUS7LQ9H0K6 701 aaKnown RBP16.76■□□□□ 0.27
VAMP1-208ENST00000544432 TMOD4Q9NZQ9 345 aa16.76■□□□□ 0.27
VAMP1-208ENST00000544432 ZBTB47Q9UFB7 747 aaPredicted RBP16.76■□□□□ 0.27
VAMP1-208ENST00000544432 SALL3Q9BXA9 1300 aa16.75■□□□□ 0.27
VAMP1-208ENST00000544432 RNF113AO15541 343 aaKnown RBP16.75■□□□□ 0.27
VAMP1-208ENST00000544432 PRKAB2O43741 272 aa16.75■□□□□ 0.27
VAMP1-208ENST00000544432 MX1P20591 662 aa16.75■□□□□ 0.27
VAMP1-208ENST00000544432 OSBPP22059 807 aa16.75■□□□□ 0.27
VAMP1-208ENST00000544432 CTGFP29279 349 aa16.75■□□□□ 0.27
VAMP1-208ENST00000544432 GCLCP48506 637 aaPredicted RBP16.75■□□□□ 0.27
VAMP1-208ENST00000544432 MTMR2Q13614 643 aa16.75■□□□□ 0.27
VAMP1-208ENST00000544432 ABCB5Q2M3G0 1257 aa16.75■□□□□ 0.27
VAMP1-208ENST00000544432 SHROOM1Q2M3G4 852 aaPredicted RBP16.75■□□□□ 0.27
VAMP1-208ENST00000544432 ANKRD45Q5TZF3 282 aa16.75■□□□□ 0.27
VAMP1-208ENST00000544432 TSHZ3Q63HK5 1081 aa16.75■□□□□ 0.27
VAMP1-208ENST00000544432 SMCR8Q8TEV9 937 aaPredicted RBP16.75■□□□□ 0.27
VAMP1-208ENST00000544432 APPBP2Q92624 585 aa16.75■□□□□ 0.27
VAMP1-208ENST00000544432 DDRGK1Q96HY6 314 aa16.75■□□□□ 0.27
VAMP1-208ENST00000544432 TRIM47Q96LD4 638 aa16.75■□□□□ 0.27
VAMP1-208ENST00000544432 STRBPQ96SI9 672 aaKnown RBP16.75■□□□□ 0.27
VAMP1-208ENST00000544432 CABP5Q9NP86 173 aa16.75■□□□□ 0.27
VAMP1-208ENST00000544432 SWAP70Q9UH65 585 aa16.75■□□□□ 0.27
VAMP1-208ENST00000544432 DDX60LQ5H9U9 1706 aaKnown RBP16.75■□□□□ 0.27
VAMP1-208ENST00000544432 MLLT1Q03111 559 aaPredicted RBP16.74■□□□□ 0.27
VAMP1-208ENST00000544432 C12orf60Q5U649 245 aa16.74■□□□□ 0.27
VAMP1-208ENST00000544432 GIMAP6Q6P9H5 292 aa16.74■□□□□ 0.27
VAMP1-208ENST00000544432 USP17L2Q6R6M4 530 aa16.74■□□□□ 0.27
VAMP1-208ENST00000544432 NBPF11Q86T75 865 aa16.74■□□□□ 0.27
VAMP1-208ENST00000544432 OTUD7AQ8TE49 926 aaPredicted RBP16.74■□□□□ 0.27
VAMP1-208ENST00000544432 RWDD1Q9H446 243 aaPredicted RBP16.74■□□□□ 0.27
VAMP1-208ENST00000544432 STAP2Q9UGK3 403 aa16.74■□□□□ 0.27
VAMP1-208ENST00000544432 SRRDQ9UH36 339 aa16.74■□□□□ 0.27
VAMP1-208ENST00000544432 PTCH2Q9Y6C5 1203 aa16.74■□□□□ 0.27
VAMP1-208ENST00000544432 SLC4A4Q9Y6R1 1079 aa16.74■□□□□ 0.27
VAMP1-208ENST00000544432 LOC285556D6RIA3 1793 aa16.74■□□□□ 0.27
VAMP1-208ENST00000544432 FMNL1O95466 1100 aaPredicted RBP16.73■□□□□ 0.27
VAMP1-208ENST00000544432 FCGRTP55899 365 aa16.73■□□□□ 0.27
VAMP1-208ENST00000544432 SOX10P56693 466 aa16.73■□□□□ 0.27
VAMP1-208ENST00000544432 FAM110CQ1W6H9 321 aa16.73■□□□□ 0.27
VAMP1-208ENST00000544432 AMOTL1Q8IY63 956 aa16.73■□□□□ 0.27
VAMP1-208ENST00000544432 OSBP2Q969R2 916 aa16.73■□□□□ 0.27
VAMP1-208ENST00000544432 C12orf42Q96LP6 360 aa16.73■□□□□ 0.27
VAMP1-208ENST00000544432 ASCC2Q9H1I8 757 aaPredicted RBP16.73■□□□□ 0.27
VAMP1-208ENST00000544432 MYH7P12883 1935 aa16.72■□□□□ 0.27
VAMP1-208ENST00000544432 NAV1Q8NEY1 1877 aa16.72■□□□□ 0.27
VAMP1-208ENST00000544432 USP17L12C9JPN9 530 aa16.72■□□□□ 0.27
VAMP1-208ENST00000544432 USP17L21D6R901 530 aa16.72■□□□□ 0.27
VAMP1-208ENST00000544432 CYP2D6P10635 497 aa16.72■□□□□ 0.27
VAMP1-208ENST00000544432 GUCY1A2P33402 732 aa16.72■□□□□ 0.27
VAMP1-208ENST00000544432 USP14P54578 494 aa16.72■□□□□ 0.27
VAMP1-208ENST00000544432 RAB3GAP1Q15042 981 aa16.72■□□□□ 0.27
VAMP1-208ENST00000544432 SMC5Q8IY18 1101 aa16.72■□□□□ 0.27
VAMP1-208ENST00000544432 CCDC17Q96LX7 622 aa16.72■□□□□ 0.27
VAMP1-208ENST00000544432 KIAA1683Q9H0B3 1180 aa16.72■□□□□ 0.27
VAMP1-208ENST00000544432 EMILIN3Q9NT22 766 aa16.72■□□□□ 0.27
VAMP1-208ENST00000544432 CENPFP49454 3210 aa16.72■□□□□ 0.27
VAMP1-208ENST00000544432 GNAT2P19087 354 aa16.71■□□□□ 0.27
VAMP1-208ENST00000544432 EVX2Q03828 476 aa16.71■□□□□ 0.27
VAMP1-208ENST00000544432 SLC9C1Q4G0N8 1177 aa16.71■□□□□ 0.27
VAMP1-208ENST00000544432 SBK1Q52WX2 424 aa16.71■□□□□ 0.27
VAMP1-208ENST00000544432 CTR9Q6PD62 1173 aa16.71■□□□□ 0.27
VAMP1-208ENST00000544432 C16orf86Q6ZW13 317 aa16.71■□□□□ 0.27
VAMP1-208ENST00000544432 TICAM2Q86XR7 235 aa16.71■□□□□ 0.27
VAMP1-208ENST00000544432 ANKRD13CQ8N6S4 541 aa16.71■□□□□ 0.27
VAMP1-208ENST00000544432 EXOC6Q8TAG9 804 aa16.71■□□□□ 0.27
VAMP1-208ENST00000544432 ZNF333Q96JL9 665 aa16.71■□□□□ 0.27
VAMP1-208ENST00000544432 MORF4L1Q9UBU8 362 aa16.71■□□□□ 0.27
VAMP1-208ENST00000544432 GSG1L2A8MUP6 293 aa16.7■□□□□ 0.26
VAMP1-208ENST00000544432 CDK8P49336 464 aa16.7■□□□□ 0.26
VAMP1-208ENST00000544432 PDE1AP54750 535 aa16.7■□□□□ 0.26
VAMP1-208ENST00000544432 IRX3P78415 501 aaPredicted RBP16.7■□□□□ 0.26
VAMP1-208ENST00000544432 TMEM179Q6ZVK1 233 aa16.7■□□□□ 0.26
VAMP1-208ENST00000544432 GTF3C2Q8WUA4 911 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms