RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 WDR18Q9BV38 432 aa33.57■■■□□ 2.96
PDCD2-211ENST00000544336 TMOD4Q9NZQ9 345 aa33.57■■■□□ 2.96
PDCD2-211ENST00000544336 EXOC6BQ9Y2D4 811 aa33.57■■■□□ 2.96
PDCD2-211ENST00000544336 DEFB118Q96PH6 123 aa33.56■■■□□ 2.96
PDCD2-211ENST00000544336 HTATIP2Q9BUP3 242 aa33.56■■■□□ 2.96
PDCD2-211ENST00000544336 HLA-DOAP06340 250 aa33.55■■■□□ 2.96
PDCD2-211ENST00000544336 FXR1P51114 621 aaKnown RBP eCLIP33.55■■■□□ 2.96
PDCD2-211ENST00000544336 BACE1P56817 501 aa33.55■■■□□ 2.96
PDCD2-211ENST00000544336 IRX3P78415 501 aaPredicted RBP33.55■■■□□ 2.96
PDCD2-211ENST00000544336 PANK1Q8TE04 598 aa33.55■■■□□ 2.96
PDCD2-211ENST00000544336 TFRCP02786 760 aaKnown RBP33.54■■■□□ 2.96
PDCD2-211ENST00000544336 METTL16Q86W50 562 aaKnown RBP33.54■■■□□ 2.96
PDCD2-211ENST00000544336 MAGEB6Q8N7X4 407 aa33.54■■■□□ 2.96
PDCD2-211ENST00000544336 ZBTB21Q9ULJ3 1066 aa33.54■■■□□ 2.96
PDCD2-211ENST00000544336 CHRDL2Q6WN34 429 aa33.53■■■□□ 2.96
PDCD2-211ENST00000544336 AACSQ86V21 672 aa33.53■■■□□ 2.96
PDCD2-211ENST00000544336 ANTXR1Q9H6X2 564 aa33.53■■■□□ 2.96
PDCD2-211ENST00000544336 PEX10O60683 326 aa33.52■■■□□ 2.96
PDCD2-211ENST00000544336 IGSF3O75054 1194 aa33.52■■■□□ 2.96
PDCD2-211ENST00000544336 USP5P45974 858 aa33.52■■■□□ 2.96
PDCD2-211ENST00000544336 USP17L10C9JJH3 530 aa33.51■■■□□ 2.95
PDCD2-211ENST00000544336 P2RX7Q99572 595 aaKnown RBP33.51■■■□□ 2.95
PDCD2-211ENST00000544336 DIEXFQ68CQ4 756 aaKnown RBP33.5■■■□□ 2.95
PDCD2-211ENST00000544336 PLXNB2O15031 1838 aa33.5■■■□□ 2.95
PDCD2-211ENST00000544336 C19orf81C9J6K1 198 aa33.49■■■□□ 2.95
PDCD2-211ENST00000544336 ERC1Q8IUD2 1116 aa33.49■■■□□ 2.95
PDCD2-211ENST00000544336 IL1RAPL2Q9NP60 686 aa33.49■■■□□ 2.95
PDCD2-211ENST00000544336 PAK6Q9NQU5 681 aaPredicted RBP33.49■■■□□ 2.95
PDCD2-211ENST00000544336 MORF4L1Q9UBU8 362 aa33.49■■■□□ 2.95
PDCD2-211ENST00000544336 HOXA7P31268 230 aaPredicted RBP33.48■■■□□ 2.95
PDCD2-211ENST00000544336 XRN2Q9H0D6 950 aaKnown RBP eCLIP33.48■■■□□ 2.95
PDCD2-211ENST00000544336 GINM1Q9NU53 330 aa33.48■■■□□ 2.95
PDCD2-211ENST00000544336 GJD2Q9UKL4 321 aa33.48■■■□□ 2.95
PDCD2-211ENST00000544336 GH2P01242 217 aa33.47■■■□□ 2.95
PDCD2-211ENST00000544336 HMGCRP04035 888 aa33.47■■■□□ 2.95
PDCD2-211ENST00000544336 HERVK_113P62684 666 aa33.47■■■□□ 2.95
PDCD2-211ENST00000544336 MAP3K12Q12852 859 aa33.47■■■□□ 2.95
PDCD2-211ENST00000544336 TRIM32Q13049 653 aa33.46■■■□□ 2.95
PDCD2-211ENST00000544336 BCL11AQ9H165 835 aa33.46■■■□□ 2.95
PDCD2-211ENST00000544336 TXNRD2Q9NNW7 524 aa33.46■■■□□ 2.95
PDCD2-211ENST00000544336 ZBED9Q6R2W3 1325 aa33.46■■■□□ 2.95
PDCD2-211ENST00000544336 APBB1O00213 710 aa33.45■■■□□ 2.95
PDCD2-211ENST00000544336 NR2E3Q9Y5X4 410 aa33.45■■■□□ 2.95
PDCD2-211ENST00000544336 CYP2B6P20813 491 aa33.44■■■□□ 2.94
PDCD2-211ENST00000544336 ZYXQ15942 572 aaKnown RBP33.44■■■□□ 2.94
PDCD2-211ENST00000544336 CERS3Q8IU89 383 aa33.44■■■□□ 2.94
PDCD2-211ENST00000544336 GPRC5AQ8NFJ5 357 aa33.44■■■□□ 2.94
PDCD2-211ENST00000544336 CRISPLD2Q9H0B8 497 aa33.44■■■□□ 2.94
PDCD2-211ENST00000544336 EMILIN3Q9NT22 766 aa33.44■■■□□ 2.94
PDCD2-211ENST00000544336 TRIOBPQ9H2D6 2365 aa33.44■■■□□ 2.94
PDCD2-211ENST00000544336 USP17L2Q6R6M4 530 aa33.43■■■□□ 2.94
PDCD2-211ENST00000544336 PAGR1Q9BTK6 254 aa33.43■■■□□ 2.94
PDCD2-211ENST00000544336 RBM27Q9P2N5 1060 aaKnown RBP33.43■■■□□ 2.94
PDCD2-211ENST00000544336 SERPINB13Q9UIV8 391 aa33.43■■■□□ 2.94
PDCD2-211ENST00000544336 NAV1Q8NEY1 1877 aa33.42■■■□□ 2.94
PDCD2-211ENST00000544336 RHPN1Q8TCX5 695 aa33.42■■■□□ 2.94
PDCD2-211ENST00000544336 PAWRQ96IZ0 340 aaKnown RBP33.42■■■□□ 2.94
PDCD2-211ENST00000544336 FEZ1Q99689 392 aa33.42■■■□□ 2.94
PDCD2-211ENST00000544336 RAB3GAP1Q15042 981 aa33.41■■■□□ 2.94
PDCD2-211ENST00000544336 HSP90AB4PQ58FF6 505 aa33.41■■■□□ 2.94
PDCD2-211ENST00000544336 TATDN1Q6P1N9 297 aa33.41■■■□□ 2.94
PDCD2-211ENST00000544336 DIS3LQ8TF46 1054 aaKnown RBP33.41■■■□□ 2.94
PDCD2-211ENST00000544336 TRIB2Q92519 343 aa33.41■■■□□ 2.94
PDCD2-211ENST00000544336 RBPJLQ9UBG7 517 aa33.41■■■□□ 2.94
PDCD2-211ENST00000544336 EVI5O60447 810 aa33.4■■■□□ 2.94
PDCD2-211ENST00000544336 TTC6Q86TZ1 520 aa33.4■■■□□ 2.94
PDCD2-211ENST00000544336 CCAR1Q8IX12 1150 aaKnown RBP33.4■■■□□ 2.94
PDCD2-211ENST00000544336 EHD4Q9H223 541 aa33.4■■■□□ 2.94
PDCD2-211ENST00000544336 HMX1Q9NP08 348 aaPredicted RBP33.4■■■□□ 2.94
PDCD2-211ENST00000544336 ALPK3Q96L96 1907 aa33.4■■■□□ 2.94
PDCD2-211ENST00000544336 DDX60LQ5H9U9 1706 aaKnown RBP33.39■■■□□ 2.94
PDCD2-211ENST00000544336 RPTORQ8N122 1335 aa33.39■■■□□ 2.94
PDCD2-211ENST00000544336 MAGEB6P1A0A0J9YX57 407 aa33.39■■■□□ 2.94
PDCD2-211ENST00000544336 CAPN2P17655 700 aa33.39■■■□□ 2.94
PDCD2-211ENST00000544336 Q3C1V9 767 aa33.39■■■□□ 2.94
PDCD2-211ENST00000544336 NUDT12Q9BQG2 462 aa33.39■■■□□ 2.94
PDCD2-211ENST00000544336 RIOK1Q9BRS2 568 aaKnown RBP33.39■■■□□ 2.94
PDCD2-211ENST00000544336 ERVK-9P63128 1117 aa33.38■■■□□ 2.93
PDCD2-211ENST00000544336 ERVK-24P63145 666 aa33.38■■■□□ 2.93
PDCD2-211ENST00000544336 CERKLQ49MI3 558 aaPredicted RBP33.38■■■□□ 2.93
PDCD2-211ENST00000544336 DNAJC2Q99543 621 aaKnown RBP33.38■■■□□ 2.93
PDCD2-211ENST00000544336 PORCNQ9H237 461 aa33.38■■■□□ 2.93
PDCD2-211ENST00000544336 PLCD1P51178 756 aa33.37■■■□□ 2.93
PDCD2-211ENST00000544336 PDE3AQ14432 1141 aa33.37■■■□□ 2.93
PDCD2-211ENST00000544336 TTF1Q15361 905 aaPredicted RBP33.37■■■□□ 2.93
PDCD2-211ENST00000544336 ABCB5Q2M3G0 1257 aa33.37■■■□□ 2.93
PDCD2-211ENST00000544336 NECAB2Q7Z6G3 386 aa33.37■■■□□ 2.93
PDCD2-211ENST00000544336 POLR3DP05423 398 aaPredicted RBP33.36■■■□□ 2.93
PDCD2-211ENST00000544336 MS4A1P11836 297 aa33.36■■■□□ 2.93
PDCD2-211ENST00000544336 PDE6AP16499 860 aa33.36■■■□□ 2.93
PDCD2-211ENST00000544336 MAPK4P31152 587 aa33.36■■■□□ 2.93
PDCD2-211ENST00000544336 SLC9C2Q5TAH2 1124 aa33.36■■■□□ 2.93
PDCD2-211ENST00000544336 POTEEQ6S8J3 1075 aa33.36■■■□□ 2.93
PDCD2-211ENST00000544336 CLASRPQ8N2M8 674 aaKnown RBP33.36■■■□□ 2.93
PDCD2-211ENST00000544336 SOCS4Q8WXH5 440 aa33.36■■■□□ 2.93
PDCD2-211ENST00000544336 TMED8Q6PL24 325 aaPredicted RBP33.35■■■□□ 2.93
PDCD2-211ENST00000544336 ACER1Q8TDN7 264 aa33.35■■■□□ 2.93
PDCD2-211ENST00000544336 GTF3C2Q8WUA4 911 aaPredicted RBP33.35■■■□□ 2.93
PDCD2-211ENST00000544336 KIF1BPQ96EK5 621 aa33.35■■■□□ 2.93
PDCD2-211ENST00000544336 CWC22Q9HCG8 908 aaKnown RBP33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms