RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 DYNLL2Q96FJ2 89 aa11.86□□□□□ -0.51
VEGFB-204ENST00000543462 DSCC1Q9BVC3 393 aa11.86□□□□□ -0.51
VEGFB-204ENST00000543462 GINM1Q9NU53 330 aa11.86□□□□□ -0.51
VEGFB-204ENST00000543462 ZBTB21Q9ULJ3 1066 aa11.86□□□□□ -0.51
VEGFB-204ENST00000543462 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.86□□□□□ -0.51
VEGFB-204ENST00000543462 CSADQ9Y600 493 aa11.86□□□□□ -0.51
VEGFB-204ENST00000543462 FGAP02671 866 aa11.85□□□□□ -0.51
VEGFB-204ENST00000543462 POLR3DP05423 398 aaPredicted RBP11.85□□□□□ -0.51
VEGFB-204ENST00000543462 PPATQ06203 517 aa11.85□□□□□ -0.51
VEGFB-204ENST00000543462 SLC10A4Q96EP9 437 aa11.85□□□□□ -0.51
VEGFB-204ENST00000543462 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.85□□□□□ -0.51
VEGFB-204ENST00000543462 SWAP70Q9UH65 585 aa11.85□□□□□ -0.51
VEGFB-204ENST00000543462 IRF6O14896 467 aa11.84□□□□□ -0.51
VEGFB-204ENST00000543462 ASNSP08243 561 aa11.84□□□□□ -0.51
VEGFB-204ENST00000543462 RASA1P20936 1047 aa11.84□□□□□ -0.51
VEGFB-204ENST00000543462 TDO2P48775 406 aa11.84□□□□□ -0.51
VEGFB-204ENST00000543462 CDK8P49336 464 aa11.84□□□□□ -0.51
VEGFB-204ENST00000543462 MFAP1P55081 439 aaKnown RBP11.84□□□□□ -0.51
VEGFB-204ENST00000543462 PPARAQ07869 468 aa11.84□□□□□ -0.51
VEGFB-204ENST00000543462 CCDC84Q86UT8 332 aaPredicted RBP11.84□□□□□ -0.51
VEGFB-204ENST00000543462 CRACR2BQ8N4Y2 399 aaPredicted RBP11.84□□□□□ -0.51
VEGFB-204ENST00000543462 OTUD5Q96G74 571 aa11.84□□□□□ -0.51
VEGFB-204ENST00000543462 DDRGK1Q96HY6 314 aa11.84□□□□□ -0.51
VEGFB-204ENST00000543462 ESYT1Q9BSJ8 1104 aa11.84□□□□□ -0.51
VEGFB-204ENST00000543462 NACAP1Q9BZK3 213 aa11.84□□□□□ -0.51
VEGFB-204ENST00000543462 NAPBQ9H115 298 aa11.84□□□□□ -0.51
VEGFB-204ENST00000543462 AFG3L2Q9Y4W6 797 aa11.84□□□□□ -0.51
VEGFB-204ENST00000543462 MGAMO43451 1857 aa11.83□□□□□ -0.52
VEGFB-204ENST00000543462 IGKV6D-41A0A0C4DH26 115 aa11.83□□□□□ -0.52
VEGFB-204ENST00000543462 CDC45O75419 566 aa11.83□□□□□ -0.52
VEGFB-204ENST00000543462 GDF11O95390 407 aa11.83□□□□□ -0.52
VEGFB-204ENST00000543462 TM4SF4P48230 202 aa11.83□□□□□ -0.52
VEGFB-204ENST00000543462 KIF23Q02241 960 aaPredicted RBP11.83□□□□□ -0.52
VEGFB-204ENST00000543462 PTH1RQ03431 593 aa11.83□□□□□ -0.52
VEGFB-204ENST00000543462 TBC1D10CQ8IV04 446 aa11.83□□□□□ -0.52
VEGFB-204ENST00000543462 BRI3BPQ8WY22 251 aa11.83□□□□□ -0.52
VEGFB-204ENST00000543462 WDR18Q9BV38 432 aa11.83□□□□□ -0.52
VEGFB-204ENST00000543462 LSG1Q9H089 658 aaKnown RBP11.83□□□□□ -0.52
VEGFB-204ENST00000543462 WBP1LQ9NX94 342 aa11.83□□□□□ -0.52
VEGFB-204ENST00000543462 ZSWIM8A7E2V4 1837 aa11.83□□□□□ -0.52
VEGFB-204ENST00000543462 COL11A1P12107 1806 aaPredicted RBP11.82□□□□□ -0.52
VEGFB-204ENST00000543462 A0A0G2JLL6 359 aaPredicted RBP11.82□□□□□ -0.52
VEGFB-204ENST00000543462 MANSC4A6NHS7 340 aaPredicted RBP11.82□□□□□ -0.52
VEGFB-204ENST00000543462 IGF2BP3O00425 579 aaKnown RBP eCLIP11.82□□□□□ -0.52
VEGFB-204ENST00000543462 CXCL11O14625 94 aa11.82□□□□□ -0.52
VEGFB-204ENST00000543462 ORC4O43929 436 aa11.82□□□□□ -0.52
VEGFB-204ENST00000543462 GH2P01242 217 aa11.82□□□□□ -0.52
VEGFB-204ENST00000543462 AKR1B1P15121 316 aa11.82□□□□□ -0.52
VEGFB-204ENST00000543462 CERKLQ49MI3 558 aaPredicted RBP11.82□□□□□ -0.52
VEGFB-204ENST00000543462 PAXIP1Q6ZW49 1069 aaPredicted RBP11.82□□□□□ -0.52
VEGFB-204ENST00000543462 PRRT2Q7Z6L0 340 aaPredicted RBP11.82□□□□□ -0.52
VEGFB-204ENST00000543462 SIAH1Q8IUQ4 282 aa11.82□□□□□ -0.52
VEGFB-204ENST00000543462 REM2Q8IYK8 340 aaPredicted RBP11.82□□□□□ -0.52
VEGFB-204ENST00000543462 NKX2-3Q8TAU0 364 aa11.82□□□□□ -0.52
VEGFB-204ENST00000543462 RUFY2Q8WXA3 655 aa11.82□□□□□ -0.52
VEGFB-204ENST00000543462 PTPN18Q99952 460 aa11.82□□□□□ -0.52
VEGFB-204ENST00000543462 CFHR5Q9BXR6 569 aa11.82□□□□□ -0.52
VEGFB-204ENST00000543462 TBC1D2Q9BYX2 928 aa11.82□□□□□ -0.52
VEGFB-204ENST00000543462 MINDY4BA8MYZ0 360 aa11.81□□□□□ -0.52
VEGFB-204ENST00000543462 APPP05067 770 aa11.81□□□□□ -0.52
VEGFB-204ENST00000543462 NOVP48745 357 aa11.81□□□□□ -0.52
VEGFB-204ENST00000543462 MKRN3Q13064 507 aaKnown RBP11.81□□□□□ -0.52
VEGFB-204ENST00000543462 ABCB5Q2M3G0 1257 aa11.81□□□□□ -0.52
VEGFB-204ENST00000543462 SH3D19Q5HYK7 790 aa11.81□□□□□ -0.52
VEGFB-204ENST00000543462 TMEM179Q6ZVK1 233 aa11.81□□□□□ -0.52
VEGFB-204ENST00000543462 AMOTL1Q8IY63 956 aa11.81□□□□□ -0.52
VEGFB-204ENST00000543462 MAP4K1Q92918 833 aa11.81□□□□□ -0.52
VEGFB-204ENST00000543462 CCDC17Q96LX7 622 aa11.81□□□□□ -0.52
VEGFB-204ENST00000543462 PICK1Q9NRD5 415 aa11.81□□□□□ -0.52
VEGFB-204ENST00000543462 ZHX2Q9Y6X8 837 aa11.81□□□□□ -0.52
VEGFB-204ENST00000543462 ADGRA2Q96PE1 1338 aa11.81□□□□□ -0.52
VEGFB-204ENST00000543462 USP17L5A8MUK1 530 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 GTF2A2P52657 109 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 CTDSPL2Q05D32 466 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 GRM1Q13255 1194 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 SNAPC2Q13487 334 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 SEPT2Q15019 361 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 GPAT2Q6NUI2 795 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 IFNL1Q8IU54 200 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 CLEC10AQ8IUN9 316 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 ZNF280CQ8ND82 737 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 STAG1Q8WVM7 1258 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 C12orf42Q96LP6 360 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 TRIM34Q9BYJ4 488 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 ZCCHC17Q9NP64 241 aaKnown RBP11.8□□□□□ -0.52
VEGFB-204ENST00000543462 SAGE1Q9NXZ1 904 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 TAF6LQ9Y6J9 622 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 NEDD4P46934 1319 aa11.8□□□□□ -0.52
VEGFB-204ENST00000543462 CASP8AP2Q9UKL3 1982 aa11.79□□□□□ -0.52
VEGFB-204ENST00000543462 A0A1W2PRG0 241 aa11.79□□□□□ -0.52
VEGFB-204ENST00000543462 PCP11498 1178 aaKnown RBP11.79□□□□□ -0.52
VEGFB-204ENST00000543462 CETPP11597 493 aa11.79□□□□□ -0.52
VEGFB-204ENST00000543462 INHBEP58166 350 aa11.79□□□□□ -0.52
VEGFB-204ENST00000543462 SREBF2Q12772 1141 aa11.79□□□□□ -0.52
VEGFB-204ENST00000543462 INCENPQ9NQS7 918 aa11.79□□□□□ -0.52
VEGFB-204ENST00000543462 CCL15-CCL14A0A0B4J2E2 113 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 BTBD19C9JJ37 291 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 PRDM1O75626 825 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 CYP21A2P08686 494 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 BACE1P56817 501 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms