RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 GCLCP48506 637 aaPredicted RBP23.96■■□□□ 1.43
CACNA1C-230ENST00000543114 AACSQ86V21 672 aa23.96■■□□□ 1.43
CACNA1C-230ENST00000543114 ERC1Q8IUD2 1116 aa23.96■■□□□ 1.43
CACNA1C-230ENST00000543114 MAGEB6Q8N7X4 407 aa23.96■■□□□ 1.43
CACNA1C-230ENST00000543114 U2AF1L4Q8WU68 220 aaKnown RBP23.96■■□□□ 1.43
CACNA1C-230ENST00000543114 COA7Q96BR5 231 aa23.96■■□□□ 1.43
CACNA1C-230ENST00000543114 TRIM34Q9BYJ4 488 aa23.96■■□□□ 1.43
CACNA1C-230ENST00000543114 TAOK2Q9UL54 1235 aa23.96■■□□□ 1.43
CACNA1C-230ENST00000543114 ZBTB21Q9ULJ3 1066 aa23.96■■□□□ 1.43
CACNA1C-230ENST00000543114 HLA-DOAP06340 250 aa23.95■■□□□ 1.42
CACNA1C-230ENST00000543114 BACE1P56817 501 aa23.95■■□□□ 1.42
CACNA1C-230ENST00000543114 FOXP4Q8IVH2 680 aaPredicted RBP23.95■■□□□ 1.42
CACNA1C-230ENST00000543114 H0YGN5 161 aa23.94■■□□□ 1.42
CACNA1C-230ENST00000543114 IL1RAPL2Q9NP60 686 aa23.94■■□□□ 1.42
CACNA1C-230ENST00000543114 TMOD4Q9NZQ9 345 aa23.93■■□□□ 1.42
CACNA1C-230ENST00000543114 COLQQ9Y215 455 aaPredicted RBP23.93■■□□□ 1.42
CACNA1C-230ENST00000543114 RANBP2P49792 3224 aaKnown RBP23.92■■□□□ 1.42
CACNA1C-230ENST00000543114 TRIOBPQ9H2D6 2365 aa23.92■■□□□ 1.42
CACNA1C-230ENST00000543114 IRX3P78415 501 aaPredicted RBP23.92■■□□□ 1.42
CACNA1C-230ENST00000543114 RHPN1Q8TCX5 695 aa23.92■■□□□ 1.42
CACNA1C-230ENST00000543114 GINM1Q9NU53 330 aa23.92■■□□□ 1.42
CACNA1C-230ENST00000543114 USP17L10C9JJH3 530 aa23.91■■□□□ 1.42
CACNA1C-230ENST00000543114 PEX10O60683 326 aa23.91■■□□□ 1.42
CACNA1C-230ENST00000543114 FARP2O94887 1054 aaPredicted RBP23.91■■□□□ 1.42
CACNA1C-230ENST00000543114 SGPL1O95470 568 aa23.91■■□□□ 1.42
CACNA1C-230ENST00000543114 HOXA7P31268 230 aaPredicted RBP23.91■■□□□ 1.42
CACNA1C-230ENST00000543114 USP5P45974 858 aa23.91■■□□□ 1.42
CACNA1C-230ENST00000543114 CERS3Q8IU89 383 aa23.91■■□□□ 1.42
CACNA1C-230ENST00000543114 PAK6Q9NQU5 681 aaPredicted RBP23.91■■□□□ 1.42
CACNA1C-230ENST00000543114 MORF4L1Q9UBU8 362 aa23.91■■□□□ 1.42
CACNA1C-230ENST00000543114 C19orf81C9J6K1 198 aa23.9■■□□□ 1.42
CACNA1C-230ENST00000543114 GH2P01242 217 aa23.9■■□□□ 1.42
CACNA1C-230ENST00000543114 MAP3K12Q12852 859 aa23.9■■□□□ 1.42
CACNA1C-230ENST00000543114 DEFB118Q96PH6 123 aa23.9■■□□□ 1.42
CACNA1C-230ENST00000543114 ALPK3Q96L96 1907 aa23.89■■□□□ 1.42
CACNA1C-230ENST00000543114 HERVK_113P62684 666 aa23.89■■□□□ 1.41
CACNA1C-230ENST00000543114 HSP90AB4PQ58FF6 505 aa23.89■■□□□ 1.41
CACNA1C-230ENST00000543114 DPF3Q92784 378 aa23.89■■□□□ 1.41
CACNA1C-230ENST00000543114 P2RX7Q99572 595 aaKnown RBP23.89■■□□□ 1.41
CACNA1C-230ENST00000543114 RIOK1Q9BRS2 568 aaKnown RBP23.89■■□□□ 1.41
CACNA1C-230ENST00000543114 EHD4Q9H223 541 aa23.89■■□□□ 1.41
CACNA1C-230ENST00000543114 TXNRD2Q9NNW7 524 aa23.89■■□□□ 1.41
CACNA1C-230ENST00000543114 GJD2Q9UKL4 321 aa23.89■■□□□ 1.41
CACNA1C-230ENST00000543114 APBB1O00213 710 aa23.88■■□□□ 1.41
CACNA1C-230ENST00000543114 FXR1P51114 621 aaKnown RBP eCLIP23.88■■□□□ 1.41
CACNA1C-230ENST00000543114 TATDN1Q6P1N9 297 aa23.88■■□□□ 1.41
CACNA1C-230ENST00000543114 HTATIP2Q9BUP3 242 aa23.88■■□□□ 1.41
CACNA1C-230ENST00000543114 EMILIN3Q9NT22 766 aa23.88■■□□□ 1.41
CACNA1C-230ENST00000543114 SERPINB13Q9UIV8 391 aa23.88■■□□□ 1.41
CACNA1C-230ENST00000543114 COG6Q9Y2V7 657 aa23.88■■□□□ 1.41
CACNA1C-230ENST00000543114 HMGCRP04035 888 aa23.87■■□□□ 1.41
CACNA1C-230ENST00000543114 TMED8Q6PL24 325 aaPredicted RBP23.87■■□□□ 1.41
CACNA1C-230ENST00000543114 SIRT2Q8IXJ6 389 aa23.87■■□□□ 1.41
CACNA1C-230ENST00000543114 MS4A1P11836 297 aa23.86■■□□□ 1.41
CACNA1C-230ENST00000543114 TRIM32Q13049 653 aa23.86■■□□□ 1.41
CACNA1C-230ENST00000543114 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.86■■□□□ 1.41
CACNA1C-230ENST00000543114 ZBTB40Q9NUA8 1239 aa23.86■■□□□ 1.41
CACNA1C-230ENST00000543114 TFRCP02786 760 aaKnown RBP23.85■■□□□ 1.41
CACNA1C-230ENST00000543114 PDE6AP16499 860 aa23.85■■□□□ 1.41
CACNA1C-230ENST00000543114 ZYXQ15942 572 aaKnown RBP23.85■■□□□ 1.41
CACNA1C-230ENST00000543114 POTEEQ6S8J3 1075 aa23.85■■□□□ 1.41
CACNA1C-230ENST00000543114 CHRDL2Q6WN34 429 aa23.85■■□□□ 1.41
CACNA1C-230ENST00000543114 CLASRPQ8N2M8 674 aaKnown RBP23.85■■□□□ 1.41
CACNA1C-230ENST00000543114 GPRC5AQ8NFJ5 357 aa23.85■■□□□ 1.41
CACNA1C-230ENST00000543114 KIF1BPQ96EK5 621 aa23.85■■□□□ 1.41
CACNA1C-230ENST00000543114 CRISPLD2Q9H0B8 497 aa23.85■■□□□ 1.41
CACNA1C-230ENST00000543114 DDX19BQ9UMR2 479 aa23.85■■□□□ 1.41
CACNA1C-230ENST00000543114 SZT2Q5T011 3432 aa23.84■■□□□ 1.41
CACNA1C-230ENST00000543114 MAGEB6P1A0A0J9YX57 407 aa23.84■■□□□ 1.41
CACNA1C-230ENST00000543114 SHMT1P34896 483 aa23.84■■□□□ 1.41
CACNA1C-230ENST00000543114 PLCD1P51178 756 aa23.84■■□□□ 1.41
CACNA1C-230ENST00000543114 TTF1Q15361 905 aaPredicted RBP23.84■■□□□ 1.41
CACNA1C-230ENST00000543114 USP17L2Q6R6M4 530 aa23.84■■□□□ 1.41
CACNA1C-230ENST00000543114 TTC6Q86TZ1 520 aa23.84■■□□□ 1.41
CACNA1C-230ENST00000543114 RPAP2Q8IXW5 612 aaPredicted RBP23.84■■□□□ 1.41
CACNA1C-230ENST00000543114 TRIB2Q92519 343 aa23.84■■□□□ 1.41
CACNA1C-230ENST00000543114 C12orf42Q96LP6 360 aa23.84■■□□□ 1.41
CACNA1C-230ENST00000543114 DNAJC2Q99543 621 aaKnown RBP23.84■■□□□ 1.41
CACNA1C-230ENST00000543114 FEZ1Q99689 392 aa23.84■■□□□ 1.41
CACNA1C-230ENST00000543114 RBPJLQ9UBG7 517 aa23.84■■□□□ 1.41
CACNA1C-230ENST00000543114 MYH7P12883 1935 aa23.83■■□□□ 1.41
CACNA1C-230ENST00000543114 MYH8P13535 1937 aa23.83■■□□□ 1.41
CACNA1C-230ENST00000543114 GOLIM4O00461 696 aa23.83■■□□□ 1.41
CACNA1C-230ENST00000543114 ERVK-9P63128 1117 aa23.83■■□□□ 1.41
CACNA1C-230ENST00000543114 ERVK-24P63145 666 aa23.83■■□□□ 1.41
CACNA1C-230ENST00000543114 EVX2Q03828 476 aa23.83■■□□□ 1.41
CACNA1C-230ENST00000543114 RAB3GAP1Q15042 981 aa23.83■■□□□ 1.41
CACNA1C-230ENST00000543114 SLC9C2Q5TAH2 1124 aa23.83■■□□□ 1.41
CACNA1C-230ENST00000543114 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.83■■□□□ 1.41
CACNA1C-230ENST00000543114 EDC3Q96F86 508 aaKnown RBP23.83■■□□□ 1.41
CACNA1C-230ENST00000543114 PAGR1Q9BTK6 254 aa23.83■■□□□ 1.41
CACNA1C-230ENST00000543114 BCL11AQ9H165 835 aa23.83■■□□□ 1.41
CACNA1C-230ENST00000543114 PORCNQ9H237 461 aa23.83■■□□□ 1.41
CACNA1C-230ENST00000543114 ZNF532Q9HCE3 1301 aa23.83■■□□□ 1.4
CACNA1C-230ENST00000543114 TCRBV5S4A2TA0A5A2 114 aa23.82■■□□□ 1.4
CACNA1C-230ENST00000543114 HMMRO75330 724 aa23.82■■□□□ 1.4
CACNA1C-230ENST00000543114 IFIT2P09913 472 aaKnown RBP23.82■■□□□ 1.4
CACNA1C-230ENST00000543114 CYP2B6P20813 491 aa23.82■■□□□ 1.4
CACNA1C-230ENST00000543114 ABCB5Q2M3G0 1257 aa23.82■■□□□ 1.4
CACNA1C-230ENST00000543114 Q3C1V9 767 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms