RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 SLC4A8Q2Y0W8 1093 aa14.44□□□□□ -0.1
DDX55-210ENST00000543016 RGMBQ6NW40 437 aa14.44□□□□□ -0.1
DDX55-210ENST00000543016 MFSD6Q6ZSS7 791 aa14.44□□□□□ -0.1
DDX55-210ENST00000543016 ERO1BQ86YB8 467 aa14.44□□□□□ -0.1
DDX55-210ENST00000543016 DYNLL2Q96FJ2 89 aa14.44□□□□□ -0.1
DDX55-210ENST00000543016 CNNM2Q9H8M5 875 aa14.44□□□□□ -0.1
DDX55-210ENST00000543016 BAZ2AQ9UIF9 1905 aaKnown RBP14.44□□□□□ -0.1
DDX55-210ENST00000543016 ABCB7O75027 752 aa14.43□□□□□ -0.1
DDX55-210ENST00000543016 ZKSCAN1P17029 563 aaPredicted RBP14.43□□□□□ -0.1
DDX55-210ENST00000543016 MCCP23508 829 aa14.43□□□□□ -0.1
DDX55-210ENST00000543016 INPP5BP32019 993 aa14.43□□□□□ -0.1
DDX55-210ENST00000543016 ECE1P42892 770 aa14.43□□□□□ -0.1
DDX55-210ENST00000543016 PPATQ06203 517 aa14.43□□□□□ -0.1
DDX55-210ENST00000543016 TRDNQ13061 729 aa14.43□□□□□ -0.1
DDX55-210ENST00000543016 VGLL4Q14135 290 aa14.43□□□□□ -0.1
DDX55-210ENST00000543016 ABCB5Q2M3G0 1257 aa14.43□□□□□ -0.1
DDX55-210ENST00000543016 TSGA10IPQ3SY00 556 aa14.43□□□□□ -0.1
DDX55-210ENST00000543016 TMEM179Q6ZVK1 233 aa14.43□□□□□ -0.1
DDX55-210ENST00000543016 KRT23Q9C075 422 aa14.43□□□□□ -0.1
DDX55-210ENST00000543016 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.43□□□□□ -0.1
DDX55-210ENST00000543016 SPDYE5A6NIY4 337 aa14.42□□□□□ -0.1
DDX55-210ENST00000543016 FAM196BA6NMK8 535 aa14.42□□□□□ -0.1
DDX55-210ENST00000543016 CYP21A2P08686 494 aa14.42□□□□□ -0.1
DDX55-210ENST00000543016 ZBTB48P10074 688 aaPredicted RBP14.42□□□□□ -0.1
DDX55-210ENST00000543016 HAND2P61296 217 aa14.42□□□□□ -0.1
DDX55-210ENST00000543016 KRT32Q14532 448 aa14.42□□□□□ -0.1
DDX55-210ENST00000543016 DEFB115Q30KQ5 88 aa14.42□□□□□ -0.1
DDX55-210ENST00000543016 CCDC178Q5BJE1 867 aa14.42□□□□□ -0.1
DDX55-210ENST00000543016 MOB2Q70IA6 237 aa14.42□□□□□ -0.1
DDX55-210ENST00000543016 ESR2Q92731 530 aa14.42□□□□□ -0.1
DDX55-210ENST00000543016 ZKSCAN4Q969J2 545 aaPredicted RBP14.42□□□□□ -0.1
DDX55-210ENST00000543016 AS3MTQ9HBK9 375 aa14.42□□□□□ -0.1
DDX55-210ENST00000543016 ZBTB21Q9ULJ3 1066 aa14.42□□□□□ -0.1
DDX55-210ENST00000543016 SNCAIPQ9Y6H5 919 aa14.42□□□□□ -0.1
DDX55-210ENST00000543016 USP17L5A8MUK1 530 aa14.41□□□□□ -0.1
DDX55-210ENST00000543016 RASA1P20936 1047 aa14.41□□□□□ -0.1
DDX55-210ENST00000543016 HSPA4P34932 840 aa14.41□□□□□ -0.1
DDX55-210ENST00000543016 ZNF157P51786 506 aaPredicted RBP14.41□□□□□ -0.1
DDX55-210ENST00000543016 CTDSPL2Q05D32 466 aa14.41□□□□□ -0.1
DDX55-210ENST00000543016 C8orf34Q49A92 452 aa14.41□□□□□ -0.1
DDX55-210ENST00000543016 CREB3L3Q68CJ9 461 aa14.41□□□□□ -0.1
DDX55-210ENST00000543016 REM2Q8IYK8 340 aaPredicted RBP14.41□□□□□ -0.1
DDX55-210ENST00000543016 SLC44A5Q8NCS7 719 aa14.41□□□□□ -0.1
DDX55-210ENST00000543016 NEDD1Q8NHV4 660 aa14.41□□□□□ -0.1
DDX55-210ENST00000543016 KCNB2Q92953 911 aa14.41□□□□□ -0.1
DDX55-210ENST00000543016 USP26Q9BXU7 913 aa14.41□□□□□ -0.1
DDX55-210ENST00000543016 KANSL2Q9H9L4 492 aa14.41□□□□□ -0.1
DDX55-210ENST00000543016 SIPA1L1O43166 1804 aa14.41□□□□□ -0.1
DDX55-210ENST00000543016 PLIN4Q96Q06 1357 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 CXCL11O14625 94 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 SLC27A2O14975 620 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 GH2P01242 217 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 TSPY3P0CV98 308 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 TSPY8P0CW00 308 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 PTPRAP18433 802 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 EVX2Q03828 476 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 PPIL2Q13356 520 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 TBC1D10CQ8IV04 446 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 WDR18Q9BV38 432 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 NBPF3Q9H094 633 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 ELP3Q9H9T3 547 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 TCP11L1Q9NUJ3 509 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 SYNPO2Q9UMS6 1093 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 FZD1Q9UP38 647 aa14.4□□□□□ -0.1
DDX55-210ENST00000543016 LAMB1P07942 1786 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 TSPY2A6NKD2 308 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 SMIM22K7EJ46 135 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 MPHOSPH10O00566 681 aaKnown RBP14.39□□□□□ -0.11
DDX55-210ENST00000543016 RANBP6O60518 1105 aaKnown RBP14.39□□□□□ -0.11
DDX55-210ENST00000543016 SLC10A3P09131 477 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 SLURP2P0DP57 97 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 AKR1B1P15121 316 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 TFAP4Q01664 338 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 NOGQ13253 232 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 RRP1BQ14684 758 aaKnown RBP14.39□□□□□ -0.11
DDX55-210ENST00000543016 SPRYD7Q5W111 196 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 RALYLQ86SE5 291 aaKnown RBP14.39□□□□□ -0.11
DDX55-210ENST00000543016 NCOA7Q8NI08 942 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 WNK4Q96J92 1243 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 CLMNQ96JQ2 1002 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 MTA3Q9BTC8 594 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 SH2D4AQ9H788 454 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 UPF2Q9HAU5 1272 aaKnown RBP14.39□□□□□ -0.11
DDX55-210ENST00000543016 TOMM22Q9NS69 142 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 ZHX2Q9Y6X8 837 aa14.39□□□□□ -0.11
DDX55-210ENST00000543016 C19orf81C9J6K1 198 aa14.38□□□□□ -0.11
DDX55-210ENST00000543016 E7EWF7 191 aa14.38□□□□□ -0.11
DDX55-210ENST00000543016 PRDM1O75626 825 aa14.38□□□□□ -0.11
DDX55-210ENST00000543016 GDF11O95390 407 aa14.38□□□□□ -0.11
DDX55-210ENST00000543016 HMGB1P09429 215 aaKnown RBP14.38□□□□□ -0.11
DDX55-210ENST00000543016 INHBEP58166 350 aa14.38□□□□□ -0.11
DDX55-210ENST00000543016 ANAPC15P60006 121 aa14.38□□□□□ -0.11
DDX55-210ENST00000543016 IQCA1Q86XH1 822 aa14.38□□□□□ -0.11
DDX55-210ENST00000543016 RASAL3Q86YV0 1011 aa14.38□□□□□ -0.11
DDX55-210ENST00000543016 STK11IPQ8N1F8 1099 aa14.38□□□□□ -0.11
DDX55-210ENST00000543016 ZNF280CQ8ND82 737 aa14.38□□□□□ -0.11
DDX55-210ENST00000543016 OPTNQ96CV9 577 aa14.38□□□□□ -0.11
DDX55-210ENST00000543016 TTC14Q96N46 770 aa14.38□□□□□ -0.11
DDX55-210ENST00000543016 ARHGEF10LQ9HCE6 1279 aa14.38□□□□□ -0.11
DDX55-210ENST00000543016 KCNH4Q9UQ05 1017 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms