RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 ZNF396Q96N95 335 aaPredicted RBP20.03■□□□□ 0.8
TMEM50B-210ENST00000542230 TTF2Q9UNY4 1162 aaKnown RBP20.03■□□□□ 0.8
TMEM50B-210ENST00000542230 SLC3A2P08195 630 aaKnown RBP20.03■□□□□ 0.8
TMEM50B-210ENST00000542230 SLURP2P0DP57 97 aa20.03■□□□□ 0.8
TMEM50B-210ENST00000542230 PCP11498 1178 aaKnown RBP20.03■□□□□ 0.8
TMEM50B-210ENST00000542230 ME1P48163 572 aa20.03■□□□□ 0.8
TMEM50B-210ENST00000542230 PICALMQ13492 652 aa20.03■□□□□ 0.8
TMEM50B-210ENST00000542230 CATIPQ7Z7H3 387 aa20.03■□□□□ 0.8
TMEM50B-210ENST00000542230 PIBF1Q8WXW3 757 aa20.03■□□□□ 0.8
TMEM50B-210ENST00000542230 MKNK2Q9HBH9 465 aa20.03■□□□□ 0.8
TMEM50B-210ENST00000542230 PCDHA7Q9UN72 937 aa20.03■□□□□ 0.8
TMEM50B-210ENST00000542230 BTBD18B2RXH4 712 aa20.02■□□□□ 0.8
TMEM50B-210ENST00000542230 VEGFAP15692 232 aaPredicted RBP20.02■□□□□ 0.8
TMEM50B-210ENST00000542230 LINC00301Q8NCQ3 95 aa20.02■□□□□ 0.8
TMEM50B-210ENST00000542230 FAM163AQ96GL9 167 aaPredicted RBP20.02■□□□□ 0.8
TMEM50B-210ENST00000542230 RTEL1Q9NZ71 1219 aa20.02■□□□□ 0.8
TMEM50B-210ENST00000542230 RASGRP2Q7LDG7 609 aa20.02■□□□□ 0.8
TMEM50B-210ENST00000542230 FUCA2Q9BTY2 467 aa20.02■□□□□ 0.8
TMEM50B-210ENST00000542230 DDX4Q9NQI0 724 aaKnown RBP20.02■□□□□ 0.8
TMEM50B-210ENST00000542230 MTMR7Q9Y216 660 aa20.02■□□□□ 0.8
TMEM50B-210ENST00000542230 V9GY48 417 aaPredicted RBP20.02■□□□□ 0.8
TMEM50B-210ENST00000542230 STK36Q9NRP7 1315 aa20.02■□□□□ 0.8
TMEM50B-210ENST00000542230 ADAMTSL1Q8N6G6 1762 aa20.02■□□□□ 0.8
TMEM50B-210ENST00000542230 G3V3G9 751 aa20.01■□□□□ 0.79
TMEM50B-210ENST00000542230 PKN1Q16512 942 aa20.01■□□□□ 0.79
TMEM50B-210ENST00000542230 DCAF8Q5TAQ9 597 aa20.01■□□□□ 0.79
TMEM50B-210ENST00000542230 CCAR1Q8IX12 1150 aaKnown RBP20.01■□□□□ 0.79
TMEM50B-210ENST00000542230 OXER1Q8TDS5 423 aa20.01■□□□□ 0.79
TMEM50B-210ENST00000542230 RGPD3A6NKT7 1758 aaPredicted RBP20.01■□□□□ 0.79
TMEM50B-210ENST00000542230 RGPD4Q7Z3J3 1758 aa20.01■□□□□ 0.79
TMEM50B-210ENST00000542230 NR5A1Q13285 461 aa20.01■□□□□ 0.79
TMEM50B-210ENST00000542230 STYK1Q6J9G0 422 aa20.01■□□□□ 0.79
TMEM50B-210ENST00000542230 SRBD1Q8N5C6 995 aaKnown RBP20.01■□□□□ 0.79
TMEM50B-210ENST00000542230 C7orf43Q8WVR3 580 aa20.01■□□□□ 0.79
TMEM50B-210ENST00000542230 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.01■□□□□ 0.79
TMEM50B-210ENST00000542230 RTN4Q9NQC3 1192 aaKnown RBP20.01■□□□□ 0.79
TMEM50B-210ENST00000542230 NAV1Q8NEY1 1877 aa20■□□□□ 0.79
TMEM50B-210ENST00000542230 RASA1P20936 1047 aa20■□□□□ 0.79
TMEM50B-210ENST00000542230 BRAPQ7Z569 592 aa20■□□□□ 0.79
TMEM50B-210ENST00000542230 TRIM22Q8IYM9 498 aa20■□□□□ 0.79
TMEM50B-210ENST00000542230 TMX4Q9H1E5 349 aaPredicted RBP20■□□□□ 0.79
TMEM50B-210ENST00000542230 NUP62CLQ9H1M0 184 aa20■□□□□ 0.79
TMEM50B-210ENST00000542230 CCDC196A0A1B0GTZ2 297 aa20■□□□□ 0.79
TMEM50B-210ENST00000542230 MARCKSP29966 332 aaPredicted RBP20■□□□□ 0.79
TMEM50B-210ENST00000542230 VPS54Q9P1Q0 977 aa20■□□□□ 0.79
TMEM50B-210ENST00000542230 SCN9AQ15858 1988 aa20■□□□□ 0.79
TMEM50B-210ENST00000542230 U2AF2P26368 475 aaKnown RBP eCLIP19.99■□□□□ 0.792e-8■■□□□ 11.5
TMEM50B-210ENST00000542230 CDK8P49336 464 aa19.99■□□□□ 0.79
TMEM50B-210ENST00000542230 SNW1Q13573 536 aaKnown RBP19.99■□□□□ 0.79
TMEM50B-210ENST00000542230 GNL2Q13823 731 aaKnown RBP19.99■□□□□ 0.79
TMEM50B-210ENST00000542230 TRIM29Q14134 588 aa19.99■□□□□ 0.79
TMEM50B-210ENST00000542230 STK38Q15208 465 aa19.99■□□□□ 0.79
TMEM50B-210ENST00000542230 AOC3Q16853 763 aa19.99■□□□□ 0.79
TMEM50B-210ENST00000542230 ROBO3Q96MS0 1386 aa19.99■□□□□ 0.79
TMEM50B-210ENST00000542230 C21orf2O43822 256 aa19.99■□□□□ 0.79
TMEM50B-210ENST00000542230 DEXIO95424 95 aa19.99■□□□□ 0.79
TMEM50B-210ENST00000542230 MMP1P03956 469 aa19.99■□□□□ 0.79
TMEM50B-210ENST00000542230 RCAN1P53805 252 aa19.99■□□□□ 0.79
TMEM50B-210ENST00000542230 SF3A1Q15459 793 aaKnown RBP19.99■□□□□ 0.79
TMEM50B-210ENST00000542230 ANO1Q5XXA6 986 aa19.99■□□□□ 0.79
TMEM50B-210ENST00000542230 KIAA0825Q8IV33 1275 aa19.99■□□□□ 0.79
TMEM50B-210ENST00000542230 DIS3L2Q8IYB7 885 aaKnown RBP19.99■□□□□ 0.79
TMEM50B-210ENST00000542230 A0A1B0GVL5 298 aa19.98■□□□□ 0.79
TMEM50B-210ENST00000542230 WDHD1O75717 1129 aaPredicted RBP19.98■□□□□ 0.79
TMEM50B-210ENST00000542230 TSPY3P0CV98 308 aa19.98■□□□□ 0.79
TMEM50B-210ENST00000542230 TSPY8P0CW00 308 aa19.98■□□□□ 0.79
TMEM50B-210ENST00000542230 ATL3Q6DD88 541 aa19.98■□□□□ 0.79
TMEM50B-210ENST00000542230 TMTC3Q6ZXV5 915 aa19.98■□□□□ 0.79
TMEM50B-210ENST00000542230 STAG2Q8N3U4 1231 aa19.98■□□□□ 0.79
TMEM50B-210ENST00000542230 ERCC4Q92889 916 aaPredicted RBP19.98■□□□□ 0.79
TMEM50B-210ENST00000542230 POLR3EQ9NVU0 708 aa19.98■□□□□ 0.79
TMEM50B-210ENST00000542230 DLEC1Q9Y238 1755 aa19.98■□□□□ 0.79
TMEM50B-210ENST00000542230 FAM205CA6NFA0 338 aa19.98■□□□□ 0.79
TMEM50B-210ENST00000542230 CACNB3P54284 484 aa19.98■□□□□ 0.79
TMEM50B-210ENST00000542230 CLSTN2Q9H4D0 955 aa19.98■□□□□ 0.79
TMEM50B-210ENST00000542230 A0A087WWV3 80 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 ADAMTS3O15072 1205 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 SPTLC2O15270 562 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 ECE2O60344 883 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 NFIAQ12857 509 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 APOBEC3HQ6NTF7 200 aaKnown RBP19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 ZNF444Q8N0Y2 327 aaPredicted RBP19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 FSIP1Q8NA03 581 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 TNMDQ9H2S6 317 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 DDX60LQ5H9U9 1706 aaKnown RBP19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 IGSF3O75054 1194 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 DDAH1O94760 285 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 TOB1P50616 345 aaPredicted RBP19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 NOM1Q5C9Z4 860 aaKnown RBP19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 C16orf86Q6ZW13 317 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 ZFPM1Q8IX07 1006 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 SLF2Q8IX21 1173 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 AMOTL1Q8IY63 956 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 ENGASEQ8NFI3 743 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 EYA3Q99504 573 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 RNF26Q9BY78 433 aaPredicted RBP19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 USP40Q9NVE5 1235 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 STX8Q9UNK0 236 aa19.97■□□□□ 0.79
TMEM50B-210ENST00000542230 SNED1Q8TER0 1413 aa19.96■□□□□ 0.79
TMEM50B-210ENST00000542230 PLCG2P16885 1265 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms