RNA–Protein interactions for RNA: ENST00000542191.5

SNCAIP-222, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5 BASIC

Gene SNCAIP, Length 2,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-222ENST00000542191 ATP2B2Q01814 1243 aa16.08■□□□□ 0.16
SNCAIP-222ENST00000542191 SP8Q8IXZ3 490 aa16.08■□□□□ 0.16
SNCAIP-222ENST00000542191 GPKOWQ92917 476 aaPredicted RBP eCLIP16.08■□□□□ 0.16
SNCAIP-222ENST00000542191 MASTLQ96GX5 879 aa16.08■□□□□ 0.16
SNCAIP-222ENST00000542191 STK32BQ9NY57 414 aa16.08■□□□□ 0.16
SNCAIP-222ENST00000542191 EARS2Q5JPH6 523 aaKnown RBP16.07■□□□□ 0.16
SNCAIP-222ENST00000542191 VAT1LQ9HCJ6 419 aa16.07■□□□□ 0.16
SNCAIP-222ENST00000542191 USP25Q9UHP3 1055 aa16.07■□□□□ 0.16
SNCAIP-222ENST00000542191 PCDHA7Q9UN72 937 aa16.07■□□□□ 0.16
SNCAIP-222ENST00000542191 TSPY3P0CV98 308 aa16.07■□□□□ 0.16
SNCAIP-222ENST00000542191 TSPY8P0CW00 308 aa16.07■□□□□ 0.16
SNCAIP-222ENST00000542191 PDE6BP35913 854 aa16.07■□□□□ 0.16
SNCAIP-222ENST00000542191 GRIN1Q05586 938 aa16.07■□□□□ 0.16
SNCAIP-222ENST00000542191 MYSM1Q5VVJ2 828 aa16.07■□□□□ 0.16
SNCAIP-222ENST00000542191 TICAM2Q86XR7 235 aa16.07■□□□□ 0.16
SNCAIP-222ENST00000542191 FLT1P17948 1338 aa16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 WNT7AO00755 349 aa16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 RGL2O15211 777 aa16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 BAG3O95817 575 aa16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 IL1R1P14778 569 aa16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 C12orf60Q5U649 245 aa16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 CPLX2Q6PUV4 134 aaKnown RBP16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 FSIP1Q8NA03 581 aa16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 NUP62CLQ9H1M0 184 aa16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 TNMDQ9H2S6 317 aa16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 ZSCAN16Q9H4T2 348 aaPredicted RBP16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 KIF3AQ9Y496 699 aa16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 DIS3L2Q8IYB7 885 aaKnown RBP16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 SYAP1Q96A49 352 aaPredicted RBP16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 TMX4Q9H1E5 349 aaPredicted RBP16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 ATP8A2Q9NTI2 1148 aa16.06■□□□□ 0.16
SNCAIP-222ENST00000542191 BIN1O00499 593 aa16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 RHBDL3P58872 404 aa16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 TRIM29Q14134 588 aa16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 CATIPQ7Z7H3 387 aa16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 HOMER1Q86YM7 354 aa16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 CRACR2BQ8N4Y2 399 aaPredicted RBP16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 SRBD1Q8N5C6 995 aaKnown RBP16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 RASGRP4Q8TDF6 673 aa16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 WDHD1O75717 1129 aaPredicted RBP16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 PDE4BQ07343 736 aa16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 TROAPQ12815 778 aa16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 RCSD1Q6JBY9 416 aa16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 MKRN1Q9UHC7 482 aaKnown RBP16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 CFAP45Q9UL16 551 aa16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 DUOX1Q9NRD9 1551 aa16.05■□□□□ 0.16
SNCAIP-222ENST00000542191 KLRG2A4D1S0 409 aaPredicted RBP16.04■□□□□ 0.16
SNCAIP-222ENST00000542191 RAD17O75943 681 aa16.04■□□□□ 0.16
SNCAIP-222ENST00000542191 NDUFA8P51970 172 aa16.04■□□□□ 0.16
SNCAIP-222ENST00000542191 LUZP1Q86V48 1076 aa16.04■□□□□ 0.16
SNCAIP-222ENST00000542191 FBXL16Q8N461 479 aa16.04■□□□□ 0.16
SNCAIP-222ENST00000542191 ARPP21Q9UBL0 812 aaPredicted RBP16.04■□□□□ 0.16
SNCAIP-222ENST00000542191 ZBTB12Q9Y330 459 aaPredicted RBP16.04■□□□□ 0.16
SNCAIP-222ENST00000542191 SF3B2Q13435 895 aaKnown RBP16.04■□□□□ 0.16
SNCAIP-222ENST00000542191 TRIM22Q8IYM9 498 aa16.04■□□□□ 0.16
SNCAIP-222ENST00000542191 ZNF444Q8N0Y2 327 aaPredicted RBP16.04■□□□□ 0.16
SNCAIP-222ENST00000542191 CABP5Q9NP86 173 aa16.04■□□□□ 0.16
SNCAIP-222ENST00000542191 ZNF277Q9NRM2 450 aaPredicted RBP16.04■□□□□ 0.16
SNCAIP-222ENST00000542191 USP40Q9NVE5 1235 aa16.04■□□□□ 0.16
SNCAIP-222ENST00000542191 ANAPC4Q9UJX5 808 aa16.04■□□□□ 0.16
SNCAIP-222ENST00000542191 ALDH1B1P30837 517 aa16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 LRRC47Q8N1G4 583 aaKnown RBP16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 NAP1L5Q96NT1 182 aaPredicted RBP16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 ECM29Q5VYK3 1845 aa16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 SCN9AQ15858 1988 aa16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 ECE2O60344 883 aa16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 FMNL1O95466 1100 aaPredicted RBP16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 USP17L2Q6R6M4 530 aa16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 ZSCAN29Q8IWY8 852 aaPredicted RBP16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 ZNF830Q96NB3 372 aaPredicted RBP16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 UIMC1Q96RL1 719 aa16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 MPHOSPH10O00566 681 aaKnown RBP16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 CDKL5O76039 1030 aa16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 IFNAR1P17181 557 aa16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 CDK8P49336 464 aa16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 AKAP17AQ02040 695 aaKnown RBP16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 CSPP1Q1MSJ5 1256 aa16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 PDILTQ8N807 584 aa16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 LINC00301Q8NCQ3 95 aa16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 PNMA1Q8ND90 353 aa16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 DNAJC25Q9H1X3 360 aa16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 PCDHB6Q9Y5E3 794 aa16.03■□□□□ 0.16
SNCAIP-222ENST00000542191 FRMPD2Q68DX3 1309 aaPredicted RBP16.02■□□□□ 0.16
SNCAIP-222ENST00000542191 MYH6P13533 1939 aa16.02■□□□□ 0.16
SNCAIP-222ENST00000542191 RASA1P20936 1047 aa16.02■□□□□ 0.16
SNCAIP-222ENST00000542191 UBA5Q9GZZ9 404 aa16.02■□□□□ 0.16
SNCAIP-222ENST00000542191 ZMYND15Q9H091 742 aa16.02■□□□□ 0.16
SNCAIP-222ENST00000542191 KAT14Q9H8E8 782 aa16.02■□□□□ 0.16
SNCAIP-222ENST00000542191 PSDA5PKW4 1024 aaPredicted RBP16.02■□□□□ 0.15
SNCAIP-222ENST00000542191 SPTLC2O15270 562 aa16.02■□□□□ 0.15
SNCAIP-222ENST00000542191 AP5Z1O43299 807 aa16.02■□□□□ 0.15
SNCAIP-222ENST00000542191 PKN1Q16512 942 aa16.02■□□□□ 0.15
SNCAIP-222ENST00000542191 EYA3Q99504 573 aa16.02■□□□□ 0.15
SNCAIP-222ENST00000542191 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.02■□□□□ 0.15
SNCAIP-222ENST00000542191 WDR19Q8NEZ3 1342 aa16.01■□□□□ 0.15
SNCAIP-222ENST00000542191 GPR75-ASB3A0A0A6YYF3 556 aa16.01■□□□□ 0.15
SNCAIP-222ENST00000542191 GSTO1P78417 241 aa16.01■□□□□ 0.15
SNCAIP-222ENST00000542191 MAP3K11Q16584 847 aa16.01■□□□□ 0.15
SNCAIP-222ENST00000542191 ANO6Q4KMQ2 910 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms