RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 SAP30BPQ9UHR5 308 aaKnown RBP13.82□□□□□ -0.2
VTN-203ENST00000542029 TAOK2Q9UL54 1235 aa13.82□□□□□ -0.2
VTN-203ENST00000542029 ZBTB21Q9ULJ3 1066 aa13.82□□□□□ -0.2
VTN-203ENST00000542029 MAGEB6P1A0A0J9YX57 407 aa13.81□□□□□ -0.2
VTN-203ENST00000542029 APBB1O00213 710 aa13.81□□□□□ -0.2
VTN-203ENST00000542029 MYCP01106 439 aaPredicted RBP13.81□□□□□ -0.2
VTN-203ENST00000542029 GJB1P08034 283 aa13.81□□□□□ -0.2
VTN-203ENST00000542029 PDE6AP16499 860 aa13.81□□□□□ -0.2
VTN-203ENST00000542029 MTMR2Q13614 643 aa13.81□□□□□ -0.2
VTN-203ENST00000542029 RIOK1Q9BRS2 568 aaKnown RBP13.81□□□□□ -0.2
VTN-203ENST00000542029 NDUFB9Q9Y6M9 179 aa13.81□□□□□ -0.2
VTN-203ENST00000542029 GOLIM4O00461 696 aa13.8□□□□□ -0.2
VTN-203ENST00000542029 ADCY3O60266 1144 aa13.8□□□□□ -0.2
VTN-203ENST00000542029 POLR3DP05423 398 aaPredicted RBP13.8□□□□□ -0.2
VTN-203ENST00000542029 USP14P54578 494 aa13.8□□□□□ -0.2
VTN-203ENST00000542029 MTFR1Q15390 333 aa13.8□□□□□ -0.2
VTN-203ENST00000542029 TATDN1Q6P1N9 297 aa13.8□□□□□ -0.2
VTN-203ENST00000542029 USP17L2Q6R6M4 530 aa13.8□□□□□ -0.2
VTN-203ENST00000542029 DNAJC2Q99543 621 aaKnown RBP13.8□□□□□ -0.2
VTN-203ENST00000542029 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.8□□□□□ -0.2
VTN-203ENST00000542029 RNF208Q9H0X6 261 aa13.8□□□□□ -0.2
VTN-203ENST00000542029 CABP5Q9NP86 173 aa13.8□□□□□ -0.2
VTN-203ENST00000542029 MORF4L1Q9UBU8 362 aa13.8□□□□□ -0.2
VTN-203ENST00000542029 DOCK2Q92608 1830 aa13.79□□□□□ -0.2
VTN-203ENST00000542029 GDF11O95390 407 aa13.79□□□□□ -0.2
VTN-203ENST00000542029 CCL5P13501 91 aa13.79□□□□□ -0.2
VTN-203ENST00000542029 ATP5JP18859 108 aa13.79□□□□□ -0.2
VTN-203ENST00000542029 GJA8P48165 433 aa13.79□□□□□ -0.2
VTN-203ENST00000542029 CERKLQ49MI3 558 aaPredicted RBP13.79□□□□□ -0.2
VTN-203ENST00000542029 LRRCC1Q9C099 1032 aa13.79□□□□□ -0.2
VTN-203ENST00000542029 GABRQQ9UN88 632 aa13.79□□□□□ -0.2
VTN-203ENST00000542029 GH2P01242 217 aa13.78□□□□□ -0.2
VTN-203ENST00000542029 ABCB5Q2M3G0 1257 aa13.78□□□□□ -0.2
VTN-203ENST00000542029 C12orf42Q96LP6 360 aa13.78□□□□□ -0.2
VTN-203ENST00000542029 FEZ1Q99689 392 aa13.78□□□□□ -0.2
VTN-203ENST00000542029 PAG1Q9NWQ8 432 aa13.78□□□□□ -0.2
VTN-203ENST00000542029 ZNF532Q9HCE3 1301 aa13.78□□□□□ -0.2
VTN-203ENST00000542029 CENPFP49454 3210 aa13.77□□□□□ -0.21
VTN-203ENST00000542029 HERVK_113P62684 666 aa13.77□□□□□ -0.21
VTN-203ENST00000542029 JAG1P78504 1218 aa13.77□□□□□ -0.21
VTN-203ENST00000542029 ZSCAN25Q6NSZ9 544 aa13.77□□□□□ -0.21
VTN-203ENST00000542029 CCAR1Q8IX12 1150 aaKnown RBP13.77□□□□□ -0.21
VTN-203ENST00000542029 GPRC5AQ8NFJ5 357 aa13.77□□□□□ -0.21
VTN-203ENST00000542029 U2AF1L4Q8WU68 220 aaKnown RBP13.77□□□□□ -0.21
VTN-203ENST00000542029 P2RX7Q99572 595 aaKnown RBP13.77□□□□□ -0.21
VTN-203ENST00000542029 HAUS7Q99871 368 aa13.77□□□□□ -0.21
VTN-203ENST00000542029 BOLA2Q9H3K6 86 aa13.77□□□□□ -0.21
VTN-203ENST00000542029 MCM9Q9NXL9 1143 aa13.77□□□□□ -0.21
VTN-203ENST00000542029 TCRBV5S4A2TA0A5A2 114 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 USP17L15C9J2P7 530 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 USP17L13C9JLJ4 530 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 USP17L11C9JVI0 530 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 USP17L18D6R9N7 530 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 USP17L22D6RA61 530 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 USP17L17D6RBQ6 530 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 USP17L19D6RCP7 530 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 USP17L20D6RJB6 530 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 INHAP05111 366 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 MAPK4P31152 587 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 PLCD1P51178 756 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 GABPAQ06546 454 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 USP17L24Q0WX57 530 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 RAB3GAP1Q15042 981 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 UBE3CQ15386 1083 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 AMOTL1Q8IY63 956 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 SOCS4Q8WXH5 440 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 DDRGK1Q96HY6 314 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 HTATIP2Q9BUP3 242 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 KIAA1683Q9H0B3 1180 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 BCL11AQ9H165 835 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 DCP1AQ9NPI6 582 aaPredicted RBP13.76□□□□□ -0.21
VTN-203ENST00000542029 EMILIN3Q9NT22 766 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 ATP8A2Q9NTI2 1148 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 SWAP70Q9UH65 585 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 DOCK1Q14185 1865 aa13.76□□□□□ -0.21
VTN-203ENST00000542029 MKI67P46013 3256 aaKnown RBP13.75□□□□□ -0.21
VTN-203ENST00000542029 SGPL1O95470 568 aa13.75□□□□□ -0.21
VTN-203ENST00000542029 HMGCRP04035 888 aa13.75□□□□□ -0.21
VTN-203ENST00000542029 ELNP15502 786 aa13.75□□□□□ -0.21
VTN-203ENST00000542029 SHMT1P34896 483 aa13.75□□□□□ -0.21
VTN-203ENST00000542029 ADD2P35612 726 aa13.75□□□□□ -0.21
VTN-203ENST00000542029 CCNA1P78396 465 aa13.75□□□□□ -0.21
VTN-203ENST00000542029 C20orf194Q5TEA3 1177 aa13.75□□□□□ -0.21
VTN-203ENST00000542029 TRMT44Q8IYL2 757 aaKnown RBP13.75□□□□□ -0.21
VTN-203ENST00000542029 SHISA4Q96DD7 197 aa13.75□□□□□ -0.21
VTN-203ENST00000542029 GPATCH3Q96I76 525 aa13.75□□□□□ -0.21
VTN-203ENST00000542029 NUDT12Q9BQG2 462 aa13.75□□□□□ -0.21
VTN-203ENST00000542029 UNC93B1Q9H1C4 597 aa13.75□□□□□ -0.21
VTN-203ENST00000542029 GJD2Q9UKL4 321 aa13.75□□□□□ -0.21
VTN-203ENST00000542029 RABGAP1Q9Y3P9 1069 aa13.75□□□□□ -0.21
VTN-203ENST00000542029 MAST2Q6P0Q8 1798 aa13.74□□□□□ -0.21
VTN-203ENST00000542029 XRCC5P13010 732 aaKnown RBP13.74□□□□□ -0.21
VTN-203ENST00000542029 ERVK-9P63128 1117 aa13.74□□□□□ -0.21
VTN-203ENST00000542029 ERVK-24P63145 666 aa13.74□□□□□ -0.21
VTN-203ENST00000542029 SHROOM1Q2M3G4 852 aaPredicted RBP13.74□□□□□ -0.21
VTN-203ENST00000542029 LCORLQ8N3X6 602 aa13.74□□□□□ -0.21
VTN-203ENST00000542029 DCTPP1Q9H773 170 aa13.74□□□□□ -0.21
VTN-203ENST00000542029 ECHDC1Q9NTX5 307 aa13.74□□□□□ -0.21
VTN-203ENST00000542029 BRCA2P51587 3418 aa13.73□□□□□ -0.21
VTN-203ENST00000542029 GLRX3O76003 335 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms