RNA–Protein interactions for RNA: ENST00000541960.5

GABARAPL1-210, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 3,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-210ENST00000541960 TSPY2A6NKD2 308 aa20.48■□□□□ 0.87
GABARAPL1-210ENST00000541960 F8W031 263 aaPredicted RBP20.48■□□□□ 0.87
GABARAPL1-210ENST00000541960 H0YIN7 160 aa20.48■□□□□ 0.87
GABARAPL1-210ENST00000541960 PLEKHA8P1O95397 391 aa20.48■□□□□ 0.87
GABARAPL1-210ENST00000541960 STYK1Q6J9G0 422 aa20.48■□□□□ 0.87
GABARAPL1-210ENST00000541960 LINC00301Q8NCQ3 95 aa20.48■□□□□ 0.87
GABARAPL1-210ENST00000541960 SHISA4Q96DD7 197 aa20.48■□□□□ 0.87
GABARAPL1-210ENST00000541960 KCNQ5Q9NR82 932 aa20.48■□□□□ 0.87
GABARAPL1-210ENST00000541960 TFAP4Q01664 338 aa20.47■□□□□ 0.87
GABARAPL1-210ENST00000541960 POLR3EQ9NVU0 708 aa20.47■□□□□ 0.87
GABARAPL1-210ENST00000541960 ZNF219Q9P2Y4 722 aaPredicted RBP20.47■□□□□ 0.87
GABARAPL1-210ENST00000541960 U2AF2P26368 475 aaKnown RBP eCLIP20.47■□□□□ 0.873e-6■■■□□ 15.8
GABARAPL1-210ENST00000541960 TRIM22Q8IYM9 498 aa20.47■□□□□ 0.87
GABARAPL1-210ENST00000541960 NUP62CLQ9H1M0 184 aa20.47■□□□□ 0.87
GABARAPL1-210ENST00000541960 KCNJ14Q9UNX9 436 aa20.47■□□□□ 0.87
GABARAPL1-210ENST00000541960 DEFB132Q7Z7B7 95 aa20.46■□□□□ 0.87
GABARAPL1-210ENST00000541960 PCDHA7Q9UN72 937 aa20.46■□□□□ 0.87
GABARAPL1-210ENST00000541960 DEXIO95424 95 aa20.46■□□□□ 0.87
GABARAPL1-210ENST00000541960 CERS3Q8IU89 383 aa20.46■□□□□ 0.87
GABARAPL1-210ENST00000541960 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.46■□□□□ 0.87
GABARAPL1-210ENST00000541960 DBNDD1Q9H9R9 158 aa20.46■□□□□ 0.87
GABARAPL1-210ENST00000541960 DDAH1O94760 285 aa20.46■□□□□ 0.87
GABARAPL1-210ENST00000541960 QSER1Q2KHR3 1735 aa20.46■□□□□ 0.87
GABARAPL1-210ENST00000541960 hCG_1642624A0A1W2PR95 340 aa20.45■□□□□ 0.86
GABARAPL1-210ENST00000541960 ME1P48163 572 aa20.45■□□□□ 0.86
GABARAPL1-210ENST00000541960 PPP2R5BQ15173 497 aa20.45■□□□□ 0.86
GABARAPL1-210ENST00000541960 PKN1Q16512 942 aa20.45■□□□□ 0.86
GABARAPL1-210ENST00000541960 CCAR1Q8IX12 1150 aaKnown RBP20.45■□□□□ 0.86
GABARAPL1-210ENST00000541960 SLF2Q8IX21 1173 aa20.45■□□□□ 0.86
GABARAPL1-210ENST00000541960 WASF1Q92558 559 aa20.45■□□□□ 0.86
GABARAPL1-210ENST00000541960 USP17L3A6NCW0 530 aa20.45■□□□□ 0.86
GABARAPL1-210ENST00000541960 USP17L4A6NCW7 530 aa20.45■□□□□ 0.86
GABARAPL1-210ENST00000541960 TRIM29Q14134 588 aa20.45■□□□□ 0.86
GABARAPL1-210ENST00000541960 USP17L1Q7RTZ2 530 aa20.45■□□□□ 0.86
GABARAPL1-210ENST00000541960 CLSTN2Q9H4D0 955 aa20.45■□□□□ 0.86
GABARAPL1-210ENST00000541960 ADAMTSL1Q8N6G6 1762 aa20.44■□□□□ 0.86
GABARAPL1-210ENST00000541960 MMP1P03956 469 aa20.44■□□□□ 0.86
GABARAPL1-210ENST00000541960 PLCG2P16885 1265 aa20.44■□□□□ 0.86
GABARAPL1-210ENST00000541960 RNF26Q9BY78 433 aaPredicted RBP20.44■□□□□ 0.86
GABARAPL1-210ENST00000541960 TMX4Q9H1E5 349 aaPredicted RBP20.44■□□□□ 0.86
GABARAPL1-210ENST00000541960 MKNK2Q9HBH9 465 aa20.44■□□□□ 0.86
GABARAPL1-210ENST00000541960 DDX19AQ9NUU7 478 aaKnown RBP20.44■□□□□ 0.86
GABARAPL1-210ENST00000541960 TTF2Q9UNY4 1162 aaKnown RBP20.44■□□□□ 0.86
GABARAPL1-210ENST00000541960 SUGT1Q9Y2Z0 365 aa20.44■□□□□ 0.86
GABARAPL1-210ENST00000541960 RASA1P20936 1047 aa20.44■□□□□ 0.86
GABARAPL1-210ENST00000541960 SNW1Q13573 536 aaKnown RBP20.44■□□□□ 0.86
GABARAPL1-210ENST00000541960 ANO1Q5XXA6 986 aa20.44■□□□□ 0.86
GABARAPL1-210ENST00000541960 C7orf43Q8WVR3 580 aa20.44■□□□□ 0.86
GABARAPL1-210ENST00000541960 YEATS4O95619 227 aa20.44■□□□□ 0.86
GABARAPL1-210ENST00000541960 TMTC3Q6ZXV5 915 aa20.44■□□□□ 0.86
GABARAPL1-210ENST00000541960 BTBD18B2RXH4 712 aa20.43■□□□□ 0.86
GABARAPL1-210ENST00000541960 CALM1P0DP23 149 aa20.43■□□□□ 0.86
GABARAPL1-210ENST00000541960 CALM2P0DP24 149 aa20.43■□□□□ 0.86
GABARAPL1-210ENST00000541960 CALM3P0DP25 149 aa20.43■□□□□ 0.86
GABARAPL1-210ENST00000541960 SCNN1DP51172 638 aa20.43■□□□□ 0.86
GABARAPL1-210ENST00000541960 STK38Q15208 465 aa20.43■□□□□ 0.86
GABARAPL1-210ENST00000541960 AMOTL1Q8IY63 956 aa20.43■□□□□ 0.86
GABARAPL1-210ENST00000541960 CKAP2LQ8IYA6 745 aa20.43■□□□□ 0.86
GABARAPL1-210ENST00000541960 SNED1Q8TER0 1413 aa20.43■□□□□ 0.86
GABARAPL1-210ENST00000541960 EYA3Q99504 573 aa20.43■□□□□ 0.86
GABARAPL1-210ENST00000541960 RBM28Q9NW13 759 aaKnown RBP20.43■□□□□ 0.86
GABARAPL1-210ENST00000541960 MAP3K11Q16584 847 aa20.43■□□□□ 0.86
GABARAPL1-210ENST00000541960 RBM43Q6ZSC3 357 aaKnown RBP20.43■□□□□ 0.86
GABARAPL1-210ENST00000541960 SRBD1Q8N5C6 995 aaKnown RBP20.43■□□□□ 0.86
GABARAPL1-210ENST00000541960 FOCADQ5VW36 1801 aa20.43■□□□□ 0.86
GABARAPL1-210ENST00000541960 C16orf86Q6ZW13 317 aa20.42■□□□□ 0.86
GABARAPL1-210ENST00000541960 ENGASEQ8NFI3 743 aa20.42■□□□□ 0.86
GABARAPL1-210ENST00000541960 PPP1R9BQ96SB3 815 aa20.42■□□□□ 0.86
GABARAPL1-210ENST00000541960 TNMDQ9H2S6 317 aa20.42■□□□□ 0.86
GABARAPL1-210ENST00000541960 SPTLC2O15270 562 aa20.42■□□□□ 0.86
GABARAPL1-210ENST00000541960 DIS3L2Q8IYB7 885 aaKnown RBP20.42■□□□□ 0.86
GABARAPL1-210ENST00000541960 MAP3K14Q99558 947 aa20.42■□□□□ 0.86
GABARAPL1-210ENST00000541960 V9GY48 417 aaPredicted RBP20.42■□□□□ 0.86
GABARAPL1-210ENST00000541960 CDK8P49336 464 aa20.42■□□□□ 0.86
GABARAPL1-210ENST00000541960 GNL2Q13823 731 aaKnown RBP20.42■□□□□ 0.86
GABARAPL1-210ENST00000541960 SF3A1Q15459 793 aaKnown RBP20.42■□□□□ 0.86
GABARAPL1-210ENST00000541960 KCNG4Q8TDN1 519 aa20.42■□□□□ 0.86
GABARAPL1-210ENST00000541960 DDX4Q9NQI0 724 aaKnown RBP20.42■□□□□ 0.86
GABARAPL1-210ENST00000541960 MYH1P12882 1939 aa20.41■□□□□ 0.86
GABARAPL1-210ENST00000541960 MYH6P13533 1939 aa20.41■□□□□ 0.86
GABARAPL1-210ENST00000541960 CNTNAP5Q8WYK1 1306 aa20.41■□□□□ 0.86
GABARAPL1-210ENST00000541960 SCN9AQ15858 1988 aa20.41■□□□□ 0.86
GABARAPL1-210ENST00000541960 PRPF3O43395 683 aaKnown RBP20.41■□□□□ 0.86
GABARAPL1-210ENST00000541960 ADALQ6DHV7 355 aa20.41■□□□□ 0.86
GABARAPL1-210ENST00000541960 DGKHQ86XP1 1220 aa20.41■□□□□ 0.86
GABARAPL1-210ENST00000541960 OXER1Q8TDS5 423 aa20.41■□□□□ 0.86
GABARAPL1-210ENST00000541960 ANKS1AQ92625 1134 aa20.41■□□□□ 0.86
GABARAPL1-210ENST00000541960 G3V3G9 751 aa20.41■□□□□ 0.86
GABARAPL1-210ENST00000541960 TSPY3P0CV98 308 aa20.41■□□□□ 0.86
GABARAPL1-210ENST00000541960 TSPY8P0CW00 308 aa20.41■□□□□ 0.86
GABARAPL1-210ENST00000541960 DCAF8Q5TAQ9 597 aa20.41■□□□□ 0.86
GABARAPL1-210ENST00000541960 NOSTRINQ8IVI9 506 aa20.41■□□□□ 0.86
GABARAPL1-210ENST00000541960 FSIP1Q8NA03 581 aa20.41■□□□□ 0.86
GABARAPL1-210ENST00000541960 WDHD1O75717 1129 aaPredicted RBP20.4■□□□□ 0.86
GABARAPL1-210ENST00000541960 CCDC173Q0VFZ6 552 aa20.4■□□□□ 0.86
GABARAPL1-210ENST00000541960 NR5A1Q13285 461 aa20.4■□□□□ 0.86
GABARAPL1-210ENST00000541960 PTPAQ15257 358 aa20.4■□□□□ 0.86
GABARAPL1-210ENST00000541960 PODNQ7Z5L7 613 aa20.4■□□□□ 0.86
GABARAPL1-210ENST00000541960 CNKSR1Q969H4 720 aa20.4■□□□□ 0.86
GABARAPL1-210ENST00000541960 VPS54Q9P1Q0 977 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms