RNA–Protein interactions for RNA: ENST00000541864.6

SLC12A4-204, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-204ENST00000541864 CGNQ9P2M7 1197 aaKnown RBP13.21□□□□□ -0.29
SLC12A4-204ENST00000541864 SERTAD1Q9UHV2 236 aa13.21□□□□□ -0.29
SLC12A4-204ENST00000541864 TACC3Q9Y6A5 838 aa13.21□□□□□ -0.29
SLC12A4-204ENST00000541864 CCT6AP40227 531 aaKnown RBP13.21□□□□□ -0.3
SLC12A4-204ENST00000541864 NOSTRINQ8IVI9 506 aa13.21□□□□□ -0.3
SLC12A4-204ENST00000541864 ZNF654Q8IZM8 581 aa13.21□□□□□ -0.3
SLC12A4-204ENST00000541864 KRI1Q8N9T8 703 aaKnown RBP13.21□□□□□ -0.3
SLC12A4-204ENST00000541864 BLZF1Q9H2G9 400 aa13.21□□□□□ -0.3
SLC12A4-204ENST00000541864 FAM217BQ9NTX9 383 aaPredicted RBP13.21□□□□□ -0.3
SLC12A4-204ENST00000541864 TOM1O60784 492 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 CDC25BP30305 580 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 ADKP55263 362 aaKnown RBP13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 ENOX2Q16206 610 aaKnown RBP13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 LONRF3Q496Y0 759 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 LZTFL1Q9NQ48 299 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 PCDHA5Q9Y5H7 936 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 NEMFO60524 1076 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 LIFRP42702 1097 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 NTRK3Q16288 839 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 UBXN4Q92575 508 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 SRP68Q9UHB9 627 aaKnown RBP13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 UBR2Q8IWV8 1755 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 TRIM75PA6NK02 468 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 POLR3GO15318 223 aaPredicted RBP13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 FMNL1O95466 1100 aaPredicted RBP13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 TNNT3P45378 269 aaPredicted RBP13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 ALX1Q15699 326 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 PIK3AP1Q6ZUJ8 805 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 HEATR3Q7Z4Q2 680 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 FANCBQ8NB91 859 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 ANKRD20A12PQ8NF67 263 aa13.2□□□□□ -0.3
SLC12A4-204ENST00000541864 PICALMQ13492 652 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 TRMT1LQ7Z2T5 733 aaKnown RBP13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 ADGRA1Q86SQ6 560 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 SGMS1Q86VZ5 419 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 ZNF444Q8N0Y2 327 aaPredicted RBP13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 NFE2L3Q9Y4A8 694 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 TNKSO95271 1327 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 FAM170AA1A519 330 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 NMT2O60551 498 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 DNA2P51530 1060 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 GSDMDP57764 484 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 FILIP1LQ4L180 1135 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 OXER1Q8TDS5 423 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 TRERF1Q96PN7 1200 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 DESI2Q9BSY9 194 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 CBFA2T2O43439 604 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 CUTAO60888 179 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 CLSTN1O94985 981 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 NTSR2O95665 410 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 IFNAR1P17181 557 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 RBM6P78332 1123 aaKnown RBP13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 ELF2Q15723 593 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 C3orf67Q6ZVT6 689 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 ZNF710Q8N1W2 664 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 RASGRP4Q8TDF6 673 aa13.19□□□□□ -0.3
SLC12A4-204ENST00000541864 TOGARAM1Q9Y4F4 1720 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 MPHOSPH10O00566 681 aaKnown RBP13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 RIMBP2O15034 1052 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 RBM5P52756 815 aaKnown RBP eCLIP13.18□□□□□ -0.34e-6■■■■□ 19.7
SLC12A4-204ENST00000541864 MYL5Q02045 173 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 GRIN1Q05586 938 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 ZNF215Q9UL58 517 aaPredicted RBP13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 PCDHB6Q9Y5E3 794 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 PPP6R2O75170 966 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 DEXIO95424 95 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 GOLGA8HP0CJ92 632 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 RFC4P35249 363 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 NAP1L1P55209 391 aaKnown RBP13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 TMTC2Q8N394 836 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 KAT14Q9H8E8 782 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 CCDC194A0A1B0GVG4 234 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 FAM205CA6NFA0 338 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 MMP1P03956 469 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 TXLNAP40222 546 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 PTPAQ15257 358 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 RRAGBQ5VZM2 374 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 ZSCAN29Q8IWY8 852 aaPredicted RBP13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 AK7Q96M32 723 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 CPVLQ9H3G5 476 aa13.18□□□□□ -0.3
SLC12A4-204ENST00000541864 KRBA2Q6ZNG9 492 aa13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 SMAP1Q8IYB5 467 aaPredicted RBP13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 CRACR2BQ8N4Y2 399 aaPredicted RBP13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 STAG1Q8WVM7 1258 aa13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 GPKOWQ92917 476 aaPredicted RBP eCLIP13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 SPEF2Q9C093 1822 aa13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 CELF1Q92879 486 aaKnown RBP13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 TMX4Q9H1E5 349 aaPredicted RBP13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 CEP131Q9UPN4 1083 aa13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 NWD2Q9ULI1 1742 aa13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 N4BP3O15049 544 aa13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 SECISBP2LQ93073 1101 aaKnown RBP13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 MAP3K14Q99558 947 aa13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 NUP88Q99567 741 aaPredicted RBP13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 VPS16Q9H269 839 aa13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 PAXBP1Q9Y5B6 917 aa13.17□□□□□ -0.3
SLC12A4-204ENST00000541864 CCZ1BP86790 482 aa13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 CCZ1P86791 482 aaPredicted RBP13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 RESP18Q5W5W9 173 aa13.16□□□□□ -0.3
SLC12A4-204ENST00000541864 NBPF11Q86T75 865 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms