RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 MINDY4BA8MYZ0 360 aa6.56□□□□□ -1.36
SNHG1-217ENST00000541578 CILPO75339 1184 aa6.56□□□□□ -1.36
SNHG1-217ENST00000541578 PGRP06401 933 aa6.56□□□□□ -1.36
SNHG1-217ENST00000541578 PRKCQQ04759 706 aa6.56□□□□□ -1.36
SNHG1-217ENST00000541578 MRPL58Q14197 206 aaKnown RBP6.56□□□□□ -1.36
SNHG1-217ENST00000541578 PRAMEF13Q5VWM6 474 aa6.56□□□□□ -1.36
SNHG1-217ENST00000541578 BNC2Q6ZN30 1099 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-217ENST00000541578 GATAD2BQ8WXI9 593 aa6.56□□□□□ -1.36
SNHG1-217ENST00000541578 MIPEPQ99797 713 aa6.56□□□□□ -1.36
SNHG1-217ENST00000541578 ADGRE2Q9UHX3 823 aa6.56□□□□□ -1.36
SNHG1-217ENST00000541578 TPX2Q9ULW0 747 aaKnown RBP6.56□□□□□ -1.36
SNHG1-217ENST00000541578 SNX11Q9Y5W9 270 aa6.56□□□□□ -1.36
SNHG1-217ENST00000541578 ABCC9O60706 1549 aa6.55□□□□□ -1.36
SNHG1-217ENST00000541578 FAM221AA4D161 298 aa6.55□□□□□ -1.36
SNHG1-217ENST00000541578 F13A1P00488 732 aa6.55□□□□□ -1.36
SNHG1-217ENST00000541578 ZNF16P17020 682 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-217ENST00000541578 AOC3Q16853 763 aa6.55□□□□□ -1.36
SNHG1-217ENST00000541578 SLC6A19Q695T7 634 aa6.55□□□□□ -1.36
SNHG1-217ENST00000541578 LETMD1Q6P1Q0 360 aa6.55□□□□□ -1.36
SNHG1-217ENST00000541578 MRPL41Q8IXM3 137 aaKnown RBP6.55□□□□□ -1.36
SNHG1-217ENST00000541578 TMEM87BQ96K49 555 aa6.55□□□□□ -1.36
SNHG1-217ENST00000541578 HRASLS5Q96KN8 279 aa6.55□□□□□ -1.36
SNHG1-217ENST00000541578 RHOVQ96L33 236 aa6.55□□□□□ -1.36
SNHG1-217ENST00000541578 TNKS2Q9H2K2 1166 aa6.55□□□□□ -1.36
SNHG1-217ENST00000541578 TJP2Q9UDY2 1190 aa6.55□□□□□ -1.36
SNHG1-217ENST00000541578 ADAM30Q9UKF2 790 aa6.55□□□□□ -1.36
SNHG1-217ENST00000541578 MAPK8IP1Q9UQF2 711 aa6.55□□□□□ -1.36
SNHG1-217ENST00000541578 IGSF3O75054 1194 aa6.54□□□□□ -1.36
SNHG1-217ENST00000541578 TAL1P17542 331 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-217ENST00000541578 FAM160A1Q05DH4 1040 aa6.54□□□□□ -1.36
SNHG1-217ENST00000541578 SNAP47Q5SQN1 464 aa6.54□□□□□ -1.36
SNHG1-217ENST00000541578 ZNF746Q6NUN9 644 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-217ENST00000541578 ZNF574Q6ZN55 896 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-217ENST00000541578 ERMP1Q7Z2K6 904 aa6.54□□□□□ -1.36
SNHG1-217ENST00000541578 GOLM1Q8NBJ4 401 aa6.54□□□□□ -1.36
SNHG1-217ENST00000541578 XAGE3Q8WTP9 111 aa6.54□□□□□ -1.36
SNHG1-217ENST00000541578 KBTBD4Q9NVX7 518 aa6.54□□□□□ -1.36
SNHG1-217ENST00000541578 CD8BP10966 210 aa6.53□□□□□ -1.36
SNHG1-217ENST00000541578 PLCG1P19174 1290 aa6.53□□□□□ -1.36
SNHG1-217ENST00000541578 CYP7A1P22680 504 aa6.53□□□□□ -1.36
SNHG1-217ENST00000541578 PLCL1Q15111 1095 aa6.53□□□□□ -1.36
SNHG1-217ENST00000541578 NKPD1Q17RQ9 610 aa6.53□□□□□ -1.36
SNHG1-217ENST00000541578 SFRP5Q5T4F7 317 aa6.53□□□□□ -1.36
SNHG1-217ENST00000541578 MCATQ8IVS2 390 aaKnown RBP6.53□□□□□ -1.36
SNHG1-217ENST00000541578 SPACA3Q8IXA5 215 aa6.53□□□□□ -1.36
SNHG1-217ENST00000541578 RIN3Q8TB24 985 aa6.53□□□□□ -1.36
SNHG1-217ENST00000541578 DPH2Q9BQC3 489 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-217ENST00000541578 COPRSQ9NQ92 184 aa6.53□□□□□ -1.36
SNHG1-217ENST00000541578 CORINQ9Y5Q5 1042 aa6.53□□□□□ -1.36
SNHG1-217ENST00000541578 FAM155AB1AL88 458 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-217ENST00000541578 CDH24Q86UP0 819 aa6.52□□□□□ -1.37
SNHG1-217ENST00000541578 WFDC3Q8IUB2 231 aa6.52□□□□□ -1.37
SNHG1-217ENST00000541578 ASB11Q8WXH4 323 aa6.52□□□□□ -1.37
SNHG1-217ENST00000541578 ACSF2Q96CM8 615 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-217ENST00000541578 GGT7Q9UJ14 662 aa6.52□□□□□ -1.37
SNHG1-217ENST00000541578 CNTNAP4Q9C0A0 1308 aa6.51□□□□□ -1.37
SNHG1-217ENST00000541578 TCF3P15923 654 aa6.51□□□□□ -1.37
SNHG1-217ENST00000541578 FUT4P22083 530 aa6.51□□□□□ -1.37
SNHG1-217ENST00000541578 EIF4A3P38919 411 aaKnown RBP6.51□□□□□ -1.37
SNHG1-217ENST00000541578 CD96P40200 585 aa6.51□□□□□ -1.37
SNHG1-217ENST00000541578 CLCN7P51798 805 aa6.51□□□□□ -1.37
SNHG1-217ENST00000541578 YARSP54577 528 aaKnown RBP6.51□□□□□ -1.37
SNHG1-217ENST00000541578 ANGEL2Q5VTE6 544 aaKnown RBP6.51□□□□□ -1.37
SNHG1-217ENST00000541578 FAM196AQ6ZSG2 479 aa6.51□□□□□ -1.37
SNHG1-217ENST00000541578 C22orf34Q6ZV56 151 aa6.51□□□□□ -1.37
SNHG1-217ENST00000541578 CBLL1Q75N03 491 aa6.51□□□□□ -1.37
SNHG1-217ENST00000541578 HS2ST1Q7LGA3 356 aa6.51□□□□□ -1.37
SNHG1-217ENST00000541578 TMEM87AQ8NBN3 555 aa6.51□□□□□ -1.37
SNHG1-217ENST00000541578 COX4I2Q96KJ9 171 aa6.51□□□□□ -1.37
SNHG1-217ENST00000541578 ROBO2Q9HCK4 1378 aa6.5□□□□□ -1.37
SNHG1-217ENST00000541578 PRR33A8MZF0 331 aa6.5□□□□□ -1.37
SNHG1-217ENST00000541578 PAX4O43316 350 aa6.5□□□□□ -1.37
SNHG1-217ENST00000541578 CBX7O95931 251 aa6.5□□□□□ -1.37
SNHG1-217ENST00000541578 ZNF865P0CJ78 1059 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-217ENST00000541578 GARTP22102 1010 aa6.5□□□□□ -1.37
SNHG1-217ENST00000541578 ETV3P41162 512 aa6.5□□□□□ -1.37
SNHG1-217ENST00000541578 MPP2Q14168 576 aa6.5□□□□□ -1.37
SNHG1-217ENST00000541578 ZNF792Q3KQV3 632 aa6.5□□□□□ -1.37
SNHG1-217ENST00000541578 TMEM201Q5SNT2 666 aa6.5□□□□□ -1.37
SNHG1-217ENST00000541578 FBXL19Q6PCT2 694 aa6.5□□□□□ -1.37
SNHG1-217ENST00000541578 MFSD4AQ8N468 514 aa6.5□□□□□ -1.37
SNHG1-217ENST00000541578 PI4K2BQ8TCG2 481 aa6.5□□□□□ -1.37
SNHG1-217ENST00000541578 CEP131Q9UPN4 1083 aa6.5□□□□□ -1.37
SNHG1-217ENST00000541578 SUPT16HQ9Y5B9 1047 aaKnown RBP6.5□□□□□ -1.37
SNHG1-217ENST00000541578 PRR36Q9H6K5 1346 aa6.5□□□□□ -1.37
SNHG1-217ENST00000541578 UPK3BL1B0FP48 263 aa6.49□□□□□ -1.37
SNHG1-217ENST00000541578 UPK3BL2E5RIL1 263 aa6.49□□□□□ -1.37
SNHG1-217ENST00000541578 TLR3O15455 904 aaKnown RBP6.49□□□□□ -1.37
SNHG1-217ENST00000541578 GRIN3BO60391 1043 aa6.49□□□□□ -1.37
SNHG1-217ENST00000541578 IKZF1Q13422 519 aa6.49□□□□□ -1.37
SNHG1-217ENST00000541578 CWF19L2Q2TBE0 894 aaKnown RBP6.49□□□□□ -1.37
SNHG1-217ENST00000541578 CDKAL1Q5VV42 579 aa6.49□□□□□ -1.37
SNHG1-217ENST00000541578 REC114Q7Z4M0 266 aa6.49□□□□□ -1.37
SNHG1-217ENST00000541578 FAM13CQ8NE31 585 aa6.49□□□□□ -1.37
SNHG1-217ENST00000541578 FBXO27Q8NI29 283 aa6.49□□□□□ -1.37
SNHG1-217ENST00000541578 ZNF296Q8WUU4 475 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-217ENST00000541578 HSPA12BQ96MM6 686 aa6.49□□□□□ -1.37
SNHG1-217ENST00000541578 KCNQ5Q9NR82 932 aa6.49□□□□□ -1.37
SNHG1-217ENST00000541578 KIAA1522Q9P206 1035 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-217ENST00000541578 REV1Q9UBZ9 1251 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms