RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 TLR6Q9Y2C9 796 aa7.11□□□□□ -1.27
PRKDC-210ENST00000541488 ZNF503-AS2A6NEH8 195 aa7.1□□□□□ -1.27
PRKDC-210ENST00000541488 FANCGO15287 622 aa7.1□□□□□ -1.27
PRKDC-210ENST00000541488 INHBBP09529 407 aa7.1□□□□□ -1.27
PRKDC-210ENST00000541488 LIG3P49916 1009 aa7.1□□□□□ -1.27
PRKDC-210ENST00000541488 ETF1P62495 437 aaKnown RBP7.1□□□□□ -1.27
PRKDC-210ENST00000541488 DAB2P98082 770 aa7.1□□□□□ -1.27
PRKDC-210ENST00000541488 RING1Q06587 406 aa7.1□□□□□ -1.27
PRKDC-210ENST00000541488 CCDC27Q2M243 656 aa7.1□□□□□ -1.27
PRKDC-210ENST00000541488 PI4K2BQ8TCG2 481 aa7.1□□□□□ -1.27
PRKDC-210ENST00000541488 NETO1Q8TDF5 533 aa7.1□□□□□ -1.27
PRKDC-210ENST00000541488 ANKRD24Q8TF21 1146 aa7.1□□□□□ -1.27
PRKDC-210ENST00000541488 XAGE3Q8WTP9 111 aa7.1□□□□□ -1.27
PRKDC-210ENST00000541488 JARID2Q92833 1246 aaPredicted RBP7.1□□□□□ -1.27
PRKDC-210ENST00000541488 PRDM10Q9NQV6 1147 aa7.1□□□□□ -1.27
PRKDC-210ENST00000541488 CTSWP56202 376 aa7.09□□□□□ -1.27
PRKDC-210ENST00000541488 ARMCX6Q7L4S7 300 aa7.09□□□□□ -1.27
PRKDC-210ENST00000541488 HDXQ7Z353 690 aa7.09□□□□□ -1.27
PRKDC-210ENST00000541488 ZSWIM9Q86XI8 627 aa7.09□□□□□ -1.27
PRKDC-210ENST00000541488 HEXIM2Q96MH2 286 aaKnown RBP7.09□□□□□ -1.27
PRKDC-210ENST00000541488 FAM53CQ9NYF3 392 aa7.09□□□□□ -1.27
PRKDC-210ENST00000541488 CEACAM5P06731 702 aa7.08□□□□□ -1.28
PRKDC-210ENST00000541488 CTSHP09668 335 aa7.08□□□□□ -1.28
PRKDC-210ENST00000541488 OXCT1P55809 520 aa7.08□□□□□ -1.28
PRKDC-210ENST00000541488 FGD1P98174 961 aa7.08□□□□□ -1.28
PRKDC-210ENST00000541488 NKG7Q16617 165 aa7.08□□□□□ -1.28
PRKDC-210ENST00000541488 FBXO33Q7Z6M2 555 aa7.08□□□□□ -1.28
PRKDC-210ENST00000541488 ZNF507Q8TCN5 953 aa7.08□□□□□ -1.28
PRKDC-210ENST00000541488 PLAGL2Q9UPG8 496 aa7.08□□□□□ -1.28
PRKDC-210ENST00000541488 TFE3P19532 575 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-210ENST00000541488 GRK4P32298 578 aa7.07□□□□□ -1.28
PRKDC-210ENST00000541488 TAF1CQ15572 869 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-210ENST00000541488 AOC3Q16853 763 aa7.07□□□□□ -1.28
PRKDC-210ENST00000541488 CYFIP1Q7L576 1253 aa7.07□□□□□ -1.28
PRKDC-210ENST00000541488 MIPEPQ99797 713 aa7.07□□□□□ -1.28
PRKDC-210ENST00000541488 DPH2Q9BQC3 489 aaPredicted RBP7.07□□□□□ -1.28
PRKDC-210ENST00000541488 MRS2Q9HD23 443 aa7.07□□□□□ -1.28
PRKDC-210ENST00000541488 VTI1BQ9UEU0 232 aa7.07□□□□□ -1.28
PRKDC-210ENST00000541488 IFI16Q16666 785 aaKnown RBP7.06□□□□□ -1.28
PRKDC-210ENST00000541488 AGMOQ6ZNB7 445 aa7.06□□□□□ -1.28
PRKDC-210ENST00000541488 SYDE1Q6ZW31 735 aaPredicted RBP7.06□□□□□ -1.28
PRKDC-210ENST00000541488 TMC4Q7Z404 712 aa7.06□□□□□ -1.28
PRKDC-210ENST00000541488 FLAD1Q8NFF5 587 aa7.06□□□□□ -1.28
PRKDC-210ENST00000541488 WNT10AQ9GZT5 417 aa7.06□□□□□ -1.28
PRKDC-210ENST00000541488 MIR1-1HGQ9H1L0 117 aa7.06□□□□□ -1.28
PRKDC-210ENST00000541488 SORBS3O60504 671 aa7.05□□□□□ -1.28
PRKDC-210ENST00000541488 LRIG2O94898 1065 aa7.05□□□□□ -1.28
PRKDC-210ENST00000541488 SLITRK5O94991 958 aa7.05□□□□□ -1.28
PRKDC-210ENST00000541488 EOMESO95936 686 aa7.05□□□□□ -1.28
PRKDC-210ENST00000541488 SLBPQ14493 270 aaKnown RBP eCLIP7.05□□□□□ -1.28
PRKDC-210ENST00000541488 KCNMB1Q16558 191 aa7.05□□□□□ -1.28
PRKDC-210ENST00000541488 KCT2Q8NC54 265 aa7.05□□□□□ -1.28
PRKDC-210ENST00000541488 RIN3Q8TB24 985 aa7.05□□□□□ -1.28
PRKDC-210ENST00000541488 LIN37Q96GY3 246 aaPredicted RBP7.05□□□□□ -1.28
PRKDC-210ENST00000541488 HRASLS5Q96KN8 279 aa7.05□□□□□ -1.28
PRKDC-210ENST00000541488 GTF2IRD1Q9UHL9 959 aa7.05□□□□□ -1.28
PRKDC-210ENST00000541488 TPX2Q9ULW0 747 aaKnown RBP7.05□□□□□ -1.28
PRKDC-210ENST00000541488 CNTNAP4Q9C0A0 1308 aa7.04□□□□□ -1.28
PRKDC-210ENST00000541488 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-210ENST00000541488 KRT1P04264 644 aa7.04□□□□□ -1.28
PRKDC-210ENST00000541488 C1QTNF9P0C862 333 aa7.04□□□□□ -1.28
PRKDC-210ENST00000541488 RPS26P62854 115 aaKnown RBP7.04□□□□□ -1.28
PRKDC-210ENST00000541488 PRAMEF13Q5VWM6 474 aa7.04□□□□□ -1.28
PRKDC-210ENST00000541488 FAM214BQ7L5A3 538 aa7.04□□□□□ -1.28
PRKDC-210ENST00000541488 AMIGO3Q86WK7 504 aa7.04□□□□□ -1.28
PRKDC-210ENST00000541488 FOXQ1Q9C009 403 aa7.04□□□□□ -1.28
PRKDC-210ENST00000541488 PRDM7Q9NQW5 492 aa7.04□□□□□ -1.28
PRKDC-210ENST00000541488 PRDM5Q9NQX1 630 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-210ENST00000541488 SNCAIPQ9Y6H5 919 aa7.04□□□□□ -1.28
PRKDC-210ENST00000541488 GNAT3A8MTJ3 354 aa7.03□□□□□ -1.28
PRKDC-210ENST00000541488 PRR33A8MZF0 331 aa7.03□□□□□ -1.28
PRKDC-210ENST00000541488 PGRP06401 933 aa7.03□□□□□ -1.28
PRKDC-210ENST00000541488 PRKCQQ04759 706 aa7.03□□□□□ -1.28
PRKDC-210ENST00000541488 SCARA3Q6AZY7 606 aa7.03□□□□□ -1.28
PRKDC-210ENST00000541488 BNC2Q6ZN30 1099 aaPredicted RBP7.03□□□□□ -1.28
PRKDC-210ENST00000541488 HID1Q8IV36 788 aa7.03□□□□□ -1.28
PRKDC-210ENST00000541488 TMEM265A0A087WTH1 108 aa7.02□□□□□ -1.29
PRKDC-210ENST00000541488 MINDY4BA8MYZ0 360 aa7.02□□□□□ -1.29
PRKDC-210ENST00000541488 GFRA2O00451 464 aa7.02□□□□□ -1.29
PRKDC-210ENST00000541488 FAM160A1Q05DH4 1040 aa7.02□□□□□ -1.29
PRKDC-210ENST00000541488 CDKAL1Q5VV42 579 aa7.02□□□□□ -1.29
PRKDC-210ENST00000541488 VAV3Q9UKW4 847 aa7.02□□□□□ -1.29
PRKDC-210ENST00000541488 CORINQ9Y5Q5 1042 aa7.02□□□□□ -1.29
PRKDC-210ENST00000541488 USP31Q70CQ4 1352 aa7.01□□□□□ -1.29
PRKDC-210ENST00000541488 CBX7O95931 251 aa7.01□□□□□ -1.29
PRKDC-210ENST00000541488 PF4P02776 101 aa7.01□□□□□ -1.29
PRKDC-210ENST00000541488 GBP2P32456 591 aaPredicted RBP7.01□□□□□ -1.29
PRKDC-210ENST00000541488 NKPD1Q17RQ9 610 aa7.01□□□□□ -1.29
PRKDC-210ENST00000541488 CDH24Q86UP0 819 aa7.01□□□□□ -1.29
PRKDC-210ENST00000541488 SPACA3Q8IXA5 215 aa7.01□□□□□ -1.29
PRKDC-210ENST00000541488 PHC3Q8NDX5 983 aa7.01□□□□□ -1.29
PRKDC-210ENST00000541488 CRELD1Q96HD1 420 aa7.01□□□□□ -1.29
PRKDC-210ENST00000541488 C20orf173Q96LM9 149 aa7.01□□□□□ -1.29
PRKDC-210ENST00000541488 BCL2L13Q9BXK5 485 aa7.01□□□□□ -1.29
PRKDC-210ENST00000541488 MKNK2Q9HBH9 465 aa7.01□□□□□ -1.29
PRKDC-210ENST00000541488 TJP2Q9UDY2 1190 aa7.01□□□□□ -1.29
PRKDC-210ENST00000541488 FAM155AB1AL88 458 aaPredicted RBP7□□□□□ -1.29
PRKDC-210ENST00000541488 HOXA5P20719 270 aa7□□□□□ -1.29
PRKDC-210ENST00000541488 ST13P50502 369 aaKnown RBP7□□□□□ -1.29
PRKDC-210ENST00000541488 IKZF1Q13422 519 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms