RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 SULF1Q8IWU6 871 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 MAPK8IP1Q9UQF2 711 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 HEXIM1O94992 359 aaKnown RBP11.11□□□□□ -0.63
TRERF1-205ENST00000541110 SF3A3Q12874 501 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRERF1-205ENST00000541110 DLGAP5Q15398 846 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 DPP9Q86TI2 863 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 USP48Q86UV5 1035 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 N4BP2L2Q92802 583 aaPredicted RBP11.11□□□□□ -0.63
TRERF1-205ENST00000541110 PPP1R12CQ9BZL4 782 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 MAST3O60307 1309 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 HNRNPCL2B2RXH8 293 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 HNRNPCL1O60812 293 aaKnown RBP11.11□□□□□ -0.63
TRERF1-205ENST00000541110 PCK1P35558 622 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 HHATQ5VTY9 493 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 NME8Q8N427 588 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 MOSPD1Q9UJG1 213 aa11.11□□□□□ -0.63
TRERF1-205ENST00000541110 HMGB1P1B2RPK0 211 aaPredicted RBP11.1□□□□□ -0.63
TRERF1-205ENST00000541110 SPTLC2O15270 562 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 ACTN4O43707 911 aaKnown RBP11.1□□□□□ -0.63
TRERF1-205ENST00000541110 ZNF853P0CG23 659 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 ZSCAN22P10073 491 aaPredicted RBP11.1□□□□□ -0.63
TRERF1-205ENST00000541110 SLC12A1Q13621 1099 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 DEPTORQ8TB45 409 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 ZBED2Q9BTP6 218 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 EHBP1L1Q8N3D4 1523 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 ACEP12821 1306 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 SLFN5Q08AF3 891 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 RDH13Q8NBN7 331 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 DNM3Q9UQ16 869 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 LUC7L2Q9Y383 392 aaKnown RBP11.1□□□□□ -0.63
TRERF1-205ENST00000541110 BCRP11274 1271 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 SKILP12757 684 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 FAM98CQ17RN3 349 aaKnown RBP11.1□□□□□ -0.63
TRERF1-205ENST00000541110 TPH2Q8IWU9 490 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 PDZD8Q8NEN9 1154 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 HDAC11Q96DB2 347 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 HAUS8Q9BT25 410 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 ANGPTL3Q9Y5C1 460 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 SMIM24O75264 130 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 HIBADHP31937 336 aaKnown RBP11.1□□□□□ -0.63
TRERF1-205ENST00000541110 ARPP19P56211 112 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 CALCRLQ16602 461 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 JADE1Q6IE81 842 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 MRPL46Q9H2W6 279 aaKnown RBP11.1□□□□□ -0.63
TRERF1-205ENST00000541110 SUDS3Q9H7L9 328 aaPredicted RBP11.1□□□□□ -0.63
TRERF1-205ENST00000541110 HCLS1P14317 486 aaPredicted RBP11.1□□□□□ -0.63
TRERF1-205ENST00000541110 ATF7P17544 494 aaPredicted RBP11.1□□□□□ -0.63
TRERF1-205ENST00000541110 CAPN2P17655 700 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 SKAP1Q86WV1 359 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 GOLGA8CPA6NN73 597 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 BAG6P46379 1132 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 VWA3BQ502W6 1294 aa11.1□□□□□ -0.63
TRERF1-205ENST00000541110 LRMPQ12912 555 aa11.09□□□□□ -0.63
TRERF1-205ENST00000541110 GBP6Q6ZN66 633 aa11.09□□□□□ -0.63
TRERF1-205ENST00000541110 KRT12Q99456 494 aa11.09□□□□□ -0.63
TRERF1-205ENST00000541110 ADPGKQ9BRR6 497 aa11.09□□□□□ -0.63
TRERF1-205ENST00000541110 POLIQ9UNA4 740 aa11.09□□□□□ -0.63
TRERF1-205ENST00000541110 RRP9O43818 475 aaKnown RBP11.09□□□□□ -0.63
TRERF1-205ENST00000541110 STAM2O75886 525 aa11.09□□□□□ -0.63
TRERF1-205ENST00000541110 PRPSAP1Q14558 356 aa11.09□□□□□ -0.63
TRERF1-205ENST00000541110 YWHAEP62258 255 aaKnown RBP11.09□□□□□ -0.63
TRERF1-205ENST00000541110 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRERF1-205ENST00000541110 ZNF467Q7Z7K2 595 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-205ENST00000541110 ECE1P42892 770 aa11.09□□□□□ -0.63
TRERF1-205ENST00000541110 PIK3AP1Q6ZUJ8 805 aa11.09□□□□□ -0.63
TRERF1-205ENST00000541110 DNAJC25Q9H1X3 360 aa11.09□□□□□ -0.63
TRERF1-205ENST00000541110 ALDH1B1P30837 517 aa11.09□□□□□ -0.63
TRERF1-205ENST00000541110 PABPC4Q13310 644 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRERF1-205ENST00000541110 BEND3Q5T5X7 828 aa11.09□□□□□ -0.63
TRERF1-205ENST00000541110 IQUBQ8NA54 791 aa11.09□□□□□ -0.63
TRERF1-205ENST00000541110 PA2G4Q9UQ80 394 aaKnown RBP11.09□□□□□ -0.63
TRERF1-205ENST00000541110 MKRN3Q13064 507 aaKnown RBP11.08□□□□□ -0.63
TRERF1-205ENST00000541110 ANKRD35Q8N283 1001 aa11.08□□□□□ -0.63
TRERF1-205ENST00000541110 MBD4O95243 580 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 KRT15P19012 456 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 NMIQ13287 307 aaPredicted RBP11.08□□□□□ -0.64
TRERF1-205ENST00000541110 MGARPQ8TDB4 240 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 GPIHBP1Q8IV16 184 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 SMYD2Q9NRG4 433 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 SUFUQ9UMX1 484 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 MAGED2Q9UNF1 606 aaPredicted RBP11.08□□□□□ -0.64
TRERF1-205ENST00000541110 RAD50Q92878 1312 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 RNF113AO15541 343 aaKnown RBP11.08□□□□□ -0.64
TRERF1-205ENST00000541110 TNNC2P02585 160 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 RARSP54136 660 aaKnown RBP11.08□□□□□ -0.64
TRERF1-205ENST00000541110 NOP14P78316 857 aaKnown RBP11.08□□□□□ -0.64
TRERF1-205ENST00000541110 COG7P83436 770 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 TFCP2Q12800 502 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 ARHGAP44Q17R89 818 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 MYLK4Q86YV6 388 aaPredicted RBP11.08□□□□□ -0.64
TRERF1-205ENST00000541110 RHPN1Q8TCX5 695 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 RSRC1Q96IZ7 334 aaKnown RBP11.08□□□□□ -0.64
TRERF1-205ENST00000541110 VPS16Q9H269 839 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 FAM8A1Q9UBU6 413 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 SLC8A2Q9UPR5 921 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 AKT3Q9Y243 479 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 AP5M1Q9H0R1 490 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 CCPG1Q9ULG6 757 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 EBAG9O00559 213 aa11.08□□□□□ -0.64
TRERF1-205ENST00000541110 EXOC3O60645 756 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms