RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 CAMTA2O94983 1202 aa10.86□□□□□ -0.67
TTC39C-203ENST00000540918 TTC38Q5R3I4 469 aa10.86□□□□□ -0.67
TTC39C-203ENST00000540918 NSUN7Q8NE18 718 aaKnown RBP10.86□□□□□ -0.67
TTC39C-203ENST00000540918 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.86□□□□□ -0.67
TTC39C-203ENST00000540918 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.86□□□□□ -0.67
TTC39C-203ENST00000540918 V9GYY5 206 aaPredicted RBP10.86□□□□□ -0.67
TTC39C-203ENST00000540918 SSH2Q76I76 1423 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 MYCLP12524 364 aaPredicted RBP10.85□□□□□ -0.67
TTC39C-203ENST00000540918 GNA11P29992 359 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 FAM160A1Q05DH4 1040 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 PTPN14Q15678 1187 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 CLEC4GQ6UXB4 293 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 CNKSR2Q8WXI2 1034 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 FAM84BQ96KN1 310 aaPredicted RBP10.85□□□□□ -0.67
TTC39C-203ENST00000540918 UBN2Q6ZU65 1347 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 SMCO2A6NFE2 343 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 PNOCQ13519 176 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 CLEC10AQ8IUN9 316 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 TBC1D22AQ8WUA7 517 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.85□□□□□ -0.67
TTC39C-203ENST00000540918 MST1RQ04912 1400 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 SSR1P43307 286 aaKnown RBP10.85□□□□□ -0.67
TTC39C-203ENST00000540918 GPR162Q16538 588 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 KRT79Q5XKE5 535 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 STOX1Q6ZVD7 989 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.85□□□□□ -0.67
TTC39C-203ENST00000540918 PRM3Q9NNZ6 103 aa10.85□□□□□ -0.67
TTC39C-203ENST00000540918 RILPL1Q5EBL4 403 aa10.84□□□□□ -0.67
TTC39C-203ENST00000540918 CYB5R4Q7L1T6 521 aa10.84□□□□□ -0.67
TTC39C-203ENST00000540918 ZNF274Q96GC6 653 aaPredicted RBP10.84□□□□□ -0.67
TTC39C-203ENST00000540918 DRC1Q96MC2 740 aa10.84□□□□□ -0.67
TTC39C-203ENST00000540918 CSRNP1Q96S65 589 aa10.84□□□□□ -0.67
TTC39C-203ENST00000540918 BBOX1O75936 387 aa10.84□□□□□ -0.67
TTC39C-203ENST00000540918 TOB2Q14106 344 aaPredicted RBP10.84□□□□□ -0.67
TTC39C-203ENST00000540918 AOC3Q16853 763 aa10.84□□□□□ -0.67
TTC39C-203ENST00000540918 LLPHQ9BRT6 129 aaKnown RBP10.84□□□□□ -0.67
TTC39C-203ENST00000540918 TDRD3Q9H7E2 651 aaKnown RBP10.84□□□□□ -0.67
TTC39C-203ENST00000540918 ZNF277Q9NRM2 450 aaPredicted RBP10.84□□□□□ -0.67
TTC39C-203ENST00000540918 FBXO3Q9UK99 471 aa10.84□□□□□ -0.67
TTC39C-203ENST00000540918 JCADQ9P266 1359 aa10.84□□□□□ -0.67
TTC39C-203ENST00000540918 SPATA31A5Q5VU36 1347 aa10.84□□□□□ -0.67
TTC39C-203ENST00000540918 SPATA31A7Q8IWB4 1347 aa10.84□□□□□ -0.67
TTC39C-203ENST00000540918 NCAPD2Q15021 1401 aa10.84□□□□□ -0.67
TTC39C-203ENST00000540918 CPDO75976 1380 aa10.84□□□□□ -0.67
TTC39C-203ENST00000540918 SKILP12757 684 aa10.84□□□□□ -0.67
TTC39C-203ENST00000540918 VPS72Q15906 364 aa10.84□□□□□ -0.67
TTC39C-203ENST00000540918 CERKLQ49MI3 558 aaPredicted RBP10.84□□□□□ -0.67
TTC39C-203ENST00000540918 TBC1D10BQ4KMP7 808 aaPredicted RBP10.84□□□□□ -0.67
TTC39C-203ENST00000540918 FBXO18Q8NFZ0 1043 aa10.84□□□□□ -0.67
TTC39C-203ENST00000540918 ARPP21Q9UBL0 812 aaPredicted RBP10.84□□□□□ -0.67
TTC39C-203ENST00000540918 PPLO60437 1756 aa10.83□□□□□ -0.67
TTC39C-203ENST00000540918 RBM6P78332 1123 aaKnown RBP10.83□□□□□ -0.68
TTC39C-203ENST00000540918 GPSM2P81274 684 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 GRAMD1CQ8IYS0 662 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 GOLGA6L1Q8N7Z2 621 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 CNKSR1Q969H4 720 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 COA7Q96BR5 231 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 VPS16Q9H269 839 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 PCDHA7Q9UN72 937 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 GINS2Q9Y248 185 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 LEMD3Q9Y2U8 911 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 NEDD4P46934 1319 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 IQSEC2Q5JU85 1478 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 LAMC1P11047 1609 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 PLEKHA8P1O95397 391 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 TRIM21P19474 475 aaKnown RBP10.83□□□□□ -0.68
TTC39C-203ENST00000540918 RABL6Q3YEC7 729 aaPredicted RBP10.83□□□□□ -0.68
TTC39C-203ENST00000540918 FKBP15Q5T1M5 1219 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 INTS5Q6P9B9 1019 aaKnown RBP10.83□□□□□ -0.68
TTC39C-203ENST00000540918 CD209Q9NNX6 404 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 RBM28Q9NW13 759 aaKnown RBP10.83□□□□□ -0.68
TTC39C-203ENST00000540918 SERTAD1Q9UHV2 236 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 NKX1-1Q15270 411 aaPredicted RBP10.83□□□□□ -0.68
TTC39C-203ENST00000540918 SLC4A9Q96Q91 983 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 ATP10DQ9P241 1426 aa10.83□□□□□ -0.68
TTC39C-203ENST00000540918 TBCAO75347 108 aaKnown RBP10.82□□□□□ -0.68
TTC39C-203ENST00000540918 PRR5LQ6MZQ0 368 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 CCDC70Q6NSX1 233 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 C3orf67Q6ZVT6 689 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 CBX8Q9HC52 389 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 BACH1O14867 736 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 RFX5P48382 616 aaPredicted RBP10.82□□□□□ -0.68
TTC39C-203ENST00000540918 NDUFA8P51970 172 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 MRPL12P52815 198 aaKnown RBP10.82□□□□□ -0.68
TTC39C-203ENST00000540918 AMPD3Q01432 767 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 MKRN3Q13064 507 aaKnown RBP10.82□□□□□ -0.68
TTC39C-203ENST00000540918 ZNF34Q8IZ26 560 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 IQUBQ8NA54 791 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 TSG101Q99816 390 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 MYO5BQ9ULV0 1848 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 TMEM232C9JQI7 657 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 TECP42680 631 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 ICA1Q05084 483 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 KIF4BQ2VIQ3 1234 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 TXNRD3Q86VQ6 643 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 NOSTRINQ8IVI9 506 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 ZBTB12Q9Y330 459 aaPredicted RBP10.82□□□□□ -0.68
TTC39C-203ENST00000540918 DEPDC5O75140 1603 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 RICTORQ6R327 1708 aa10.82□□□□□ -0.68
TTC39C-203ENST00000540918 HARSP12081 509 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms