RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ASNSP08243 561 aa11.07□□□□□ -0.64
SNHG1-215ENST00000540904 GNAT2P19087 354 aa11.07□□□□□ -0.64
SNHG1-215ENST00000540904 PDE4AP27815 886 aa11.07□□□□□ -0.64
SNHG1-215ENST00000540904 JAG1P78504 1218 aa11.07□□□□□ -0.64
SNHG1-215ENST00000540904 GABPAQ06546 454 aa11.07□□□□□ -0.64
SNHG1-215ENST00000540904 SPP2Q13103 211 aa11.07□□□□□ -0.64
SNHG1-215ENST00000540904 CRHR2Q13324 411 aa11.07□□□□□ -0.64
SNHG1-215ENST00000540904 CERKLQ49MI3 558 aaPredicted RBP11.07□□□□□ -0.64
SNHG1-215ENST00000540904 TATDN1Q6P1N9 297 aa11.07□□□□□ -0.64
SNHG1-215ENST00000540904 A0A0G2JLL6 359 aaPredicted RBP11.06□□□□□ -0.64
SNHG1-215ENST00000540904 GSG1L2A8MUP6 293 aa11.06□□□□□ -0.64
SNHG1-215ENST00000540904 SMIM22K7EJ46 135 aa11.06□□□□□ -0.64
SNHG1-215ENST00000540904 GPR25O00155 361 aa11.06□□□□□ -0.64
SNHG1-215ENST00000540904 GH2P01242 217 aa11.06□□□□□ -0.64
SNHG1-215ENST00000540904 NEFLP07196 543 aa11.06□□□□□ -0.64
SNHG1-215ENST00000540904 SHMT1P34896 483 aa11.06□□□□□ -0.64
SNHG1-215ENST00000540904 TAF1CQ15572 869 aaPredicted RBP11.06□□□□□ -0.64
SNHG1-215ENST00000540904 C12orf60Q5U649 245 aa11.06□□□□□ -0.64
SNHG1-215ENST00000540904 CTR9Q6PD62 1173 aa11.06□□□□□ -0.64
SNHG1-215ENST00000540904 GADL1Q6ZQY3 521 aa11.06□□□□□ -0.64
SNHG1-215ENST00000540904 CCDC129Q6ZRS4 1044 aa11.06□□□□□ -0.64
SNHG1-215ENST00000540904 FASTKD5Q7L8L6 764 aaKnown RBP11.06□□□□□ -0.64
SNHG1-215ENST00000540904 PRRT2Q7Z6L0 340 aaPredicted RBP11.06□□□□□ -0.64
SNHG1-215ENST00000540904 SLC44A5Q8NCS7 719 aa11.06□□□□□ -0.64
SNHG1-215ENST00000540904 ZNF280CQ8ND82 737 aa11.06□□□□□ -0.64
SNHG1-215ENST00000540904 ZNF296Q8WUU4 475 aaPredicted RBP11.06□□□□□ -0.64
SNHG1-215ENST00000540904 DYNLL2Q96FJ2 89 aa11.06□□□□□ -0.64
SNHG1-215ENST00000540904 CFHR5Q9BXR6 569 aa11.06□□□□□ -0.64
SNHG1-215ENST00000540904 ZBTB21Q9ULJ3 1066 aa11.06□□□□□ -0.64
SNHG1-215ENST00000540904 FOCADQ5VW36 1801 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 MINDY4BA8MYZ0 360 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 PATL2C9JE40 543 aaKnown RBP11.05□□□□□ -0.64
SNHG1-215ENST00000540904 PDHXO00330 501 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 MPHOSPH10O00566 681 aaKnown RBP11.05□□□□□ -0.64
SNHG1-215ENST00000540904 CENPBP07199 599 aaPredicted RBP11.05□□□□□ -0.64
SNHG1-215ENST00000540904 TDO2P48775 406 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 MOGSQ13724 837 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 RAB3GAP1Q15042 981 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 ABCB5Q2M3G0 1257 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 GIMAP6Q6P9H5 292 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 ANKRD23Q86SG2 305 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 TNS4Q8IZW8 715 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 STK11IPQ8N1F8 1099 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 FAM227BQ96M60 508 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 CDK5RAP2Q96SN8 1893 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 TBC1D2Q9BYX2 928 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 AS3MTQ9HBK9 375 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 ZFYVE28Q9HCC9 887 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 EPB41L4AQ9HCS5 686 aaPredicted RBP11.05□□□□□ -0.64
SNHG1-215ENST00000540904 CABP5Q9NP86 173 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 GINM1Q9NU53 330 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 ARPP21Q9UBL0 812 aaPredicted RBP11.05□□□□□ -0.64
SNHG1-215ENST00000540904 SWAP70Q9UH65 585 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 SIPA1L1O43166 1804 aa11.05□□□□□ -0.64
SNHG1-215ENST00000540904 A0A0D9SFI3 127 aa11.04□□□□□ -0.64
SNHG1-215ENST00000540904 SDSP20132 328 aa11.04□□□□□ -0.64
SNHG1-215ENST00000540904 HMGCS2P54868 508 aa11.04□□□□□ -0.64
SNHG1-215ENST00000540904 NMIQ13287 307 aaPredicted RBP11.04□□□□□ -0.64
SNHG1-215ENST00000540904 MTMR2Q13614 643 aa11.04□□□□□ -0.64
SNHG1-215ENST00000540904 NOM1Q5C9Z4 860 aaKnown RBP11.04□□□□□ -0.64
SNHG1-215ENST00000540904 GPAT2Q6NUI2 795 aa11.04□□□□□ -0.64
SNHG1-215ENST00000540904 IFNL3Q8IZI9 196 aa11.04□□□□□ -0.64
SNHG1-215ENST00000540904 WDR18Q9BV38 432 aa11.04□□□□□ -0.64
SNHG1-215ENST00000540904 NACAP1Q9BZK3 213 aa11.04□□□□□ -0.64
SNHG1-215ENST00000540904 ZCCHC17Q9NP64 241 aaKnown RBP11.04□□□□□ -0.64
SNHG1-215ENST00000540904 HELLSQ9NRZ9 838 aa11.04□□□□□ -0.64
SNHG1-215ENST00000540904 FKTNO75072 461 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 CDK8P49336 464 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 BACE1P56817 501 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 DGKZQ13574 1117 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 MCMDC2Q4G0Z9 681 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 SBK1Q52WX2 424 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 TTC22Q5TAA0 569 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 C16orf86Q6ZW13 317 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 CENPQQ7L2Z9 268 aaPredicted RBP11.03□□□□□ -0.64
SNHG1-215ENST00000540904 TICAM2Q86XR7 235 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 FEZ1Q99689 392 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 NAPBQ9H115 298 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 DIAPH3Q9NSV4 1193 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 TAOK2Q9UL54 1235 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 AGTPBP1Q9UPW5 1226 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 DOCK1Q14185 1865 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 MYH1P12882 1939 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 MYH7P12883 1935 aa11.03□□□□□ -0.64
SNHG1-215ENST00000540904 DDX60LQ5H9U9 1706 aaKnown RBP11.03□□□□□ -0.64
SNHG1-215ENST00000540904 NAV1Q8NEY1 1877 aa11.02□□□□□ -0.64
SNHG1-215ENST00000540904 USP17L10C9JJH3 530 aa11.02□□□□□ -0.65
SNHG1-215ENST00000540904 TLR2O60603 784 aa11.02□□□□□ -0.65
SNHG1-215ENST00000540904 CYP2C8P10632 490 aa11.02□□□□□ -0.65
SNHG1-215ENST00000540904 AKR1B1P15121 316 aa11.02□□□□□ -0.65
SNHG1-215ENST00000540904 GSPT1P15170 499 aaKnown RBP11.02□□□□□ -0.65
SNHG1-215ENST00000540904 GUCY1A2P33402 732 aa11.02□□□□□ -0.65
SNHG1-215ENST00000540904 SEPT2Q15019 361 aa11.02□□□□□ -0.65
SNHG1-215ENST00000540904 ZYXQ15942 572 aaKnown RBP11.02□□□□□ -0.65
SNHG1-215ENST00000540904 TREML2Q5T2D2 321 aa11.02□□□□□ -0.65
SNHG1-215ENST00000540904 VPS53Q5VIR6 699 aa11.02□□□□□ -0.65
SNHG1-215ENST00000540904 CWC27Q6UX04 472 aaKnown RBP11.02□□□□□ -0.65
SNHG1-215ENST00000540904 ZNF589Q86UQ0 364 aaPredicted RBP11.02□□□□□ -0.65
SNHG1-215ENST00000540904 PIP4P2Q8N4L2 257 aa11.02□□□□□ -0.65
SNHG1-215ENST00000540904 PROCA1Q8NCQ7 364 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms