RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 ZNF654Q8IZM8 581 aa13.04□□□□□ -0.32
LGR5-203ENST00000540815 NSUN4Q96CB9 384 aaKnown RBP13.04□□□□□ -0.32
LGR5-203ENST00000540815 MYH6P13533 1939 aa13.04□□□□□ -0.32
LGR5-203ENST00000540815 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
LGR5-203ENST00000540815 A0A087WWV3 80 aa13.04□□□□□ -0.32
LGR5-203ENST00000540815 WDHD1O75717 1129 aaPredicted RBP13.04□□□□□ -0.32
LGR5-203ENST00000540815 ZNF202O95125 648 aa13.04□□□□□ -0.32
LGR5-203ENST00000540815 FGRP09769 529 aa13.04□□□□□ -0.32
LGR5-203ENST00000540815 PFKFB1P16118 471 aa13.04□□□□□ -0.32
LGR5-203ENST00000540815 HIBADHP31937 336 aaKnown RBP13.04□□□□□ -0.32
LGR5-203ENST00000540815 PPP2R5BQ15173 497 aa13.04□□□□□ -0.32
LGR5-203ENST00000540815 TPD52L1Q16890 204 aaPredicted RBP13.04□□□□□ -0.32
LGR5-203ENST00000540815 TMED8Q6PL24 325 aaPredicted RBP13.04□□□□□ -0.32
LGR5-203ENST00000540815 CEP57L1Q8IYX8 460 aa13.04□□□□□ -0.32
LGR5-203ENST00000540815 CRACR2BQ8N4Y2 399 aaPredicted RBP13.04□□□□□ -0.32
LGR5-203ENST00000540815 KIAA1468Q9P260 1216 aa13.04□□□□□ -0.32
LGR5-203ENST00000540815 ZNF215Q9UL58 517 aaPredicted RBP13.04□□□□□ -0.32
LGR5-203ENST00000540815 DEXIO95424 95 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 MMP1P03956 469 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 TXNRD3Q86VQ6 643 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 DHX40Q8IX18 779 aaKnown RBP13.03□□□□□ -0.32
LGR5-203ENST00000540815 FANCBQ8NB91 859 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 TIGD1Q96MW7 591 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 NAT10Q9H0A0 1025 aaKnown RBP13.03□□□□□ -0.32
LGR5-203ENST00000540815 TFCP2L1Q9NZI6 479 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 MROH7-TTC4A0A0A0MT08 1334 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 TNKSO95271 1327 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 IRS2Q9Y4H2 1338 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 CYP2D7A0A087X1C5 515 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 FAM237AA0A1B0GTK4 181 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 GUCY1A2P33402 732 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 EVX2Q03828 476 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 ELF2Q15723 593 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.03□□□□□ -0.32
LGR5-203ENST00000540815 MARCKSP29966 332 aaPredicted RBP13.03□□□□□ -0.32
LGR5-203ENST00000540815 MECOMQ03112 1051 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 SAFBQ15424 915 aaKnown RBP eCLIP13.03□□□□□ -0.32
LGR5-203ENST00000540815 NOSTRINQ8IVI9 506 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 CCDC112Q8NEF3 446 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 ERCC4Q92889 916 aaPredicted RBP13.03□□□□□ -0.32
LGR5-203ENST00000540815 ZSCAN10Q96SZ4 725 aaPredicted RBP13.03□□□□□ -0.32
LGR5-203ENST00000540815 HPSEQ9Y251 543 aa13.03□□□□□ -0.32
LGR5-203ENST00000540815 BECN2A8MW95 431 aa13.02□□□□□ -0.33
LGR5-203ENST00000540815 RBM6P78332 1123 aaKnown RBP13.02□□□□□ -0.33
LGR5-203ENST00000540815 CTR9Q6PD62 1173 aa13.02□□□□□ -0.33
LGR5-203ENST00000540815 BPIFA3Q9BQP9 254 aa13.02□□□□□ -0.33
LGR5-203ENST00000540815 FOXP1Q9H334 677 aaPredicted RBP13.02□□□□□ -0.33
LGR5-203ENST00000540815 TAOK2Q9UL54 1235 aa13.02□□□□□ -0.33
LGR5-203ENST00000540815 CUTAO60888 179 aa13.02□□□□□ -0.33
LGR5-203ENST00000540815 SLC3A2P08195 630 aaKnown RBP13.02□□□□□ -0.33
LGR5-203ENST00000540815 HNRNPH2P55795 449 aaKnown RBP13.02□□□□□ -0.33
LGR5-203ENST00000540815 FBXO38Q6PIJ6 1188 aa13.02□□□□□ -0.33
LGR5-203ENST00000540815 LRRN4CLQ8ND94 238 aa13.02□□□□□ -0.33
LGR5-203ENST00000540815 NUP133Q8WUM0 1156 aa13.02□□□□□ -0.33
LGR5-203ENST00000540815 MRFAP1L1Q96HT8 127 aa13.02□□□□□ -0.33
LGR5-203ENST00000540815 CCDC144BQ3MJ40 725 aa13.01□□□□□ -0.33
LGR5-203ENST00000540815 RESP18Q5W5W9 173 aa13.01□□□□□ -0.33
LGR5-203ENST00000540815 SHC4Q6S5L8 630 aa13.01□□□□□ -0.33
LGR5-203ENST00000540815 ENAHQ8N8S7 591 aaPredicted RBP13.01□□□□□ -0.33
LGR5-203ENST00000540815 GJD4Q96KN9 370 aaPredicted RBP13.01□□□□□ -0.33
LGR5-203ENST00000540815 RNF26Q9BY78 433 aaPredicted RBP13.01□□□□□ -0.33
LGR5-203ENST00000540815 LRRC4BQ9NT99 713 aa13.01□□□□□ -0.33
LGR5-203ENST00000540815 SYKP43405 635 aa13.01□□□□□ -0.33
LGR5-203ENST00000540815 ZRSR1Q15695 479 aaKnown RBP13.01□□□□□ -0.33
LGR5-203ENST00000540815 DIS3L2Q8IYB7 885 aaKnown RBP13.01□□□□□ -0.33
LGR5-203ENST00000540815 CMTR1Q8N1G2 835 aaKnown RBP13.01□□□□□ -0.33
LGR5-203ENST00000540815 CACTINQ8WUQ7 758 aaKnown RBP13.01□□□□□ -0.33
LGR5-203ENST00000540815 FBXW7Q969H0 707 aa13.01□□□□□ -0.33
LGR5-203ENST00000540815 CRNKL1Q9BZJ0 848 aaKnown RBP13.01□□□□□ -0.33
LGR5-203ENST00000540815 CLIP2Q9UDT6 1046 aa13.01□□□□□ -0.33
LGR5-203ENST00000540815 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.01□□□□□ -0.33
LGR5-203ENST00000540815 MORC2Q9Y6X9 1032 aaPredicted RBP13.01□□□□□ -0.33
LGR5-203ENST00000540815 BTBD18B2RXH4 712 aa13□□□□□ -0.33
LGR5-203ENST00000540815 POLR3GO15318 223 aaPredicted RBP13□□□□□ -0.33
LGR5-203ENST00000540815 ORC4O43929 436 aa13□□□□□ -0.33
LGR5-203ENST00000540815 PRDX5P30044 214 aa13□□□□□ -0.33
LGR5-203ENST00000540815 RFC4P35249 363 aa13□□□□□ -0.33
LGR5-203ENST00000540815 NLRP12P59046 1061 aa13□□□□□ -0.33
LGR5-203ENST00000540815 TAF3Q5VWG9 929 aa13□□□□□ -0.33
LGR5-203ENST00000540815 KCNJ14Q9UNX9 436 aa13□□□□□ -0.33
LGR5-203ENST00000540815 NFIXQ14938 502 aa13□□□□□ -0.33
LGR5-203ENST00000540815 TRAPPC3LQ5T215 181 aa13□□□□□ -0.33
LGR5-203ENST00000540815 IFIT1BQ5T764 474 aaKnown RBP13□□□□□ -0.33
LGR5-203ENST00000540815 IQCA1Q86XH1 822 aa13□□□□□ -0.33
LGR5-203ENST00000540815 KRT222Q8N1A0 295 aa13□□□□□ -0.33
LGR5-203ENST00000540815 AOPEPQ8N6M6 819 aa13□□□□□ -0.33
LGR5-203ENST00000540815 ATP8A2Q9NTI2 1148 aa13□□□□□ -0.33
LGR5-203ENST00000540815 JAG2Q9Y219 1238 aa13□□□□□ -0.33
LGR5-203ENST00000540815 USP17L12C9JPN9 530 aa12.99□□□□□ -0.33
LGR5-203ENST00000540815 USP17L21D6R901 530 aa12.99□□□□□ -0.33
LGR5-203ENST00000540815 CALM1P0DP23 149 aa12.99□□□□□ -0.33
LGR5-203ENST00000540815 CALM2P0DP24 149 aa12.99□□□□□ -0.33
LGR5-203ENST00000540815 CALM3P0DP25 149 aa12.99□□□□□ -0.33
LGR5-203ENST00000540815 GABPB1Q06547 395 aaPredicted RBP12.99□□□□□ -0.33
LGR5-203ENST00000540815 RILPL1Q5EBL4 403 aa12.99□□□□□ -0.33
LGR5-203ENST00000540815 SPTY2D1Q68D10 685 aaPredicted RBP12.99□□□□□ -0.33
LGR5-203ENST00000540815 FAM196AQ6ZSG2 479 aa12.99□□□□□ -0.33
LGR5-203ENST00000540815 CATIPQ7Z7H3 387 aa12.99□□□□□ -0.33
LGR5-203ENST00000540815 NEK11Q8NG66 645 aa12.99□□□□□ -0.33
LGR5-203ENST00000540815 SHISA4Q96DD7 197 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms