RNA–Protein interactions for RNA: ENST00000540785.1

CARS2-223, Transcript of cysteinyl-tRNA synthetase 2, mitochondrial, human

TSL 3

Gene CARS2, Length 301 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARS2-223	ENST00000540785	YARS	P54577	528 aa	Known RBP	3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	NFKB2	Q00653	900 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	PABPC4	Q13310	644 aa	Known RBP eCLIP	3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	CBX2	Q14781	532 aa	Predicted RBP	3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	BBS9	Q3SYG4	887 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	PPM1J	Q5JR12	505 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	TMEM201	Q5SNT2	666 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	CNNM4	Q6P4Q7	775 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	JAML	Q86YT9	394 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	UBR7	Q8N806	425 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	KLHL23	Q8NBE8	558 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	JDP2	Q8WYK2	163 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	SGSM3	Q96HU1	749 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	CCDC136	Q96JN2	1154 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	KIF2C	Q99661	725 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	DHRS4	Q9BTZ2	278 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	WNT10A	Q9GZT5	417 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	CAAP1	Q9H8G2	361 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	ADAM30	Q9UKF2	790 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	ZNF214	Q9UL59	606 aa	Predicted RBP	3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	HIF3A	Q9Y2N7	669 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	ATP8A1	Q9Y2Q0	1164 aa		3.68	□□□□□ -1.82
CARS2-223	ENST00000540785	TRAV20	A0A0B4J274	112 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	C11orf95	C9JLR9	678 aa	Predicted RBP	3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	DDX3Y	O15523	660 aa	Known RBP	3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	ADCY3	O60266	1144 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	AOC2	O75106	756 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	RAPGEF3	O95398	923 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	POLR2B	P30876	1174 aa	Known RBP	3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	SOX5	P35711	763 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	CCNF	P41002	786 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	BAG6	P46379	1132 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	FAM50A	Q14320	339 aa	Known RBP	3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	HSP90AA2P	Q14568	343 aa	Predicted RBP	3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	LAPTM4A	Q15012	233 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	GRIK5	Q16478	980 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	KIF4B	Q2VIQ3	1234 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	TM4SF20	Q53R12	229 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	ZC3H12A	Q5D1E8	599 aa	Known RBP	3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	FAM209A	Q5JX71	171 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	ODR4	Q5SWX8	454 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	CDC37L1	Q7L3B6	337 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	ADAT2	Q7Z6V5	191 aa	Known RBP	3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	HID1	Q8IV36	788 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	FMNL3	Q8IVF7	1028 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	MCAT	Q8IVS2	390 aa	Known RBP	3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	LRRN4CL	Q8ND94	238 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	ATL2	Q8NHH9	583 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	ZNF507	Q8TCN5	953 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	NANOS1	Q8WY41	292 aa	Known RBP	3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	KLHL6	Q8WZ60	621 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	ACSF2	Q96CM8	615 aa	Predicted RBP	3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	CCDC74B	Q96LY2	380 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	IER2	Q9BTL4	223 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	MBIP	Q9NS73	344 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	TYW1	Q9NV66	732 aa	Known RBP	3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	TCEAL9	Q9UHQ7	104 aa		3.67	□□□□□ -1.82
CARS2-223	ENST00000540785	TRBV23-1	A0A0A0MS06	115 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	LOC100289279	A0A1B0GTE1	492 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785		A0A1W2PQU0	124 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	ANKRD34B	A5PLL1	514 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	SPDYE3	A6NKU9	549 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785		M0R082	166 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	RGS13	O14921	159 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	PLD2	O14939	933 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	FANCG	O15287	622 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	PDE8A	O60658	829 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	RNGTT	O60942	597 aa	Known RBP	3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	RFPL3	O75679	317 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	ALB	P02768	609 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	STAT3	P40763	770 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	CDKN1C	P49918	316 aa	Predicted RBP	3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	AFF1	P51825	1210 aa	Known RBP	3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	ZNF143	P52747	638 aa	Predicted RBP	3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	PMS1	P54277	932 aa	Known RBP	3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	ID3	Q02535	119 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	FNDC3B	Q53EP0	1204 aa	Known RBP	3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	AKAP4	Q5JQC9	854 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	EXOSC6	Q5RKV6	272 aa	Known RBP	3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	FOXB2	Q5VYV0	432 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	TDRD10	Q5VZ19	366 aa	Known RBP	3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	MSL1	Q68DK7	614 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	SLC6A19	Q695T7	634 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	HEATR6	Q6AI08	1181 aa	Known RBP	3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	WWC2	Q6AWC2	1192 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	C20orf204	Q6ZNR8	217 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	DDX42	Q86XP3	938 aa	Known RBP eCLIP	3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	THNSL2	Q86YJ6	484 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	SCUBE1	Q8IWY4	988 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	DMRTC2	Q8IXT2	367 aa	Predicted RBP	3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	CCDC144CP	Q8IYA2	1237 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	GOLGA6L1	Q8N7Z2	621 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	ZNF417	Q8TAU3	575 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	TMEM87B	Q96K49	555 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	EXOC2	Q96KP1	924 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	FGD4	Q96M96	766 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	SLC6A18	Q96N87	628 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	ZNF587	Q96SQ5	575 aa	Predicted RBP	3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	WDR18	Q9BV38	432 aa		3.66	□□□□□ -1.82
CARS2-223	ENST00000540785	RUSC1	Q9BVN2	902 aa		3.66	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms