RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 AAMPQ13685 434 aa20.7■□□□□ 0.9
CACNA2D4-211ENST00000540728 UBE3CQ15386 1083 aa20.7■□□□□ 0.9
CACNA2D4-211ENST00000540728 WDR18Q9BV38 432 aa20.7■□□□□ 0.9
CACNA2D4-211ENST00000540728 MCM9Q9NXL9 1143 aa20.7■□□□□ 0.9
CACNA2D4-211ENST00000540728 CENPFP49454 3210 aa20.69■□□□□ 0.9
CACNA2D4-211ENST00000540728 FMNL1O95466 1100 aaPredicted RBP20.69■□□□□ 0.9
CACNA2D4-211ENST00000540728 HMGCS2P54868 508 aa20.69■□□□□ 0.9
CACNA2D4-211ENST00000540728 LCORLQ8N3X6 602 aa20.69■□□□□ 0.9
CACNA2D4-211ENST00000540728 ARMT1Q9H993 441 aa20.69■□□□□ 0.9
CACNA2D4-211ENST00000540728 TMOD4Q9NZQ9 345 aa20.69■□□□□ 0.9
CACNA2D4-211ENST00000540728 ZBTB21Q9ULJ3 1066 aa20.69■□□□□ 0.9
CACNA2D4-211ENST00000540728 MYH7P12883 1935 aa20.68■□□□□ 0.9
CACNA2D4-211ENST00000540728 POTEFA5A3E0 1075 aa20.68■□□□□ 0.9
CACNA2D4-211ENST00000540728 MBD4O95243 580 aa20.68■□□□□ 0.9
CACNA2D4-211ENST00000540728 HOXD10P28358 340 aa20.68■□□□□ 0.9
CACNA2D4-211ENST00000540728 PRMT2P55345 433 aa20.68■□□□□ 0.9
CACNA2D4-211ENST00000540728 SH3D19Q5HYK7 790 aa20.68■□□□□ 0.9
CACNA2D4-211ENST00000540728 TATDN1Q6P1N9 297 aa20.68■□□□□ 0.9
CACNA2D4-211ENST00000540728 NBPF11Q86T75 865 aa20.68■□□□□ 0.9
CACNA2D4-211ENST00000540728 SH3TC2Q8TF17 1288 aa20.68■□□□□ 0.9
CACNA2D4-211ENST00000540728 SDR42E1Q8WUS8 393 aa20.68■□□□□ 0.9
CACNA2D4-211ENST00000540728 DDRGK1Q96HY6 314 aa20.68■□□□□ 0.9
CACNA2D4-211ENST00000540728 ZNF333Q96JL9 665 aa20.68■□□□□ 0.9
CACNA2D4-211ENST00000540728 TRIM47Q96LD4 638 aa20.68■□□□□ 0.9
CACNA2D4-211ENST00000540728 NAV1Q8NEY1 1877 aa20.68■□□□□ 0.9
CACNA2D4-211ENST00000540728 C19orf81C9J6K1 198 aa20.67■□□□□ 0.9
CACNA2D4-211ENST00000540728 ERC2O15083 957 aa20.67■□□□□ 0.9
CACNA2D4-211ENST00000540728 BCRP11274 1271 aa20.67■□□□□ 0.9
CACNA2D4-211ENST00000540728 FCGRTP55899 365 aa20.67■□□□□ 0.9
CACNA2D4-211ENST00000540728 BACE1P56817 501 aa20.67■□□□□ 0.9
CACNA2D4-211ENST00000540728 CERKLQ49MI3 558 aaPredicted RBP20.67■□□□□ 0.9
CACNA2D4-211ENST00000540728 AMOTL1Q8IY63 956 aa20.67■□□□□ 0.9
CACNA2D4-211ENST00000540728 TMEM106CQ9BVX2 250 aa20.67■□□□□ 0.9
CACNA2D4-211ENST00000540728 CABP5Q9NP86 173 aa20.67■□□□□ 0.9
CACNA2D4-211ENST00000540728 DCP1AQ9NPI6 582 aaPredicted RBP20.67■□□□□ 0.9
CACNA2D4-211ENST00000540728 ATP8A2Q9NTI2 1148 aa20.67■□□□□ 0.9
CACNA2D4-211ENST00000540728 TTC41PQ6P2S7 1318 aa20.67■□□□□ 0.9
CACNA2D4-211ENST00000540728 MYPNQ86TC9 1320 aa20.67■□□□□ 0.9
CACNA2D4-211ENST00000540728 USP17L10C9JJH3 530 aa20.66■□□□□ 0.9
CACNA2D4-211ENST00000540728 GH2P01242 217 aa20.66■□□□□ 0.9
CACNA2D4-211ENST00000540728 OSBPP22059 807 aa20.66■□□□□ 0.9
CACNA2D4-211ENST00000540728 CTGFP29279 349 aa20.66■□□□□ 0.9
CACNA2D4-211ENST00000540728 PLCD1P51178 756 aa20.66■□□□□ 0.9
CACNA2D4-211ENST00000540728 MTMR2Q13614 643 aa20.66■□□□□ 0.9
CACNA2D4-211ENST00000540728 LRRFIP1Q32MZ4 808 aaKnown RBP20.66■□□□□ 0.9
CACNA2D4-211ENST00000540728 TREML2Q5T2D2 321 aa20.66■□□□□ 0.9
CACNA2D4-211ENST00000540728 KBTBD3Q8NAB2 608 aa20.66■□□□□ 0.9
CACNA2D4-211ENST00000540728 RAET1EQ8TD07 263 aa20.66■□□□□ 0.9
CACNA2D4-211ENST00000540728 KIAA0100Q14667 2235 aaKnown RBP20.66■□□□□ 0.9
CACNA2D4-211ENST00000540728 MGAMO43451 1857 aa20.65■□□□□ 0.9
CACNA2D4-211ENST00000540728 JAG1P78504 1218 aa20.65■□□□□ 0.9
CACNA2D4-211ENST00000540728 ABCB5Q2M3G0 1257 aa20.65■□□□□ 0.9
CACNA2D4-211ENST00000540728 SLFNL1Q499Z3 407 aa20.65■□□□□ 0.9
CACNA2D4-211ENST00000540728 TSHZ3Q63HK5 1081 aa20.65■□□□□ 0.9
CACNA2D4-211ENST00000540728 GCC1Q96CN9 775 aa20.65■□□□□ 0.9
CACNA2D4-211ENST00000540728 SRRDQ9UH36 339 aa20.65■□□□□ 0.9
CACNA2D4-211ENST00000540728 TAOK2Q9UL54 1235 aa20.65■□□□□ 0.9
CACNA2D4-211ENST00000540728 DDX60LQ5H9U9 1706 aaKnown RBP20.64■□□□□ 0.9
CACNA2D4-211ENST00000540728 ZFYP08048 801 aaPredicted RBP20.64■□□□□ 0.89
CACNA2D4-211ENST00000540728 HDAC1Q13547 482 aaPredicted RBP20.64■□□□□ 0.89
CACNA2D4-211ENST00000540728 SHROOM1Q2M3G4 852 aaPredicted RBP20.64■□□□□ 0.89
CACNA2D4-211ENST00000540728 ANKRD45Q5TZF3 282 aa20.64■□□□□ 0.89
CACNA2D4-211ENST00000540728 SLC4A4Q9Y6R1 1079 aa20.64■□□□□ 0.89
CACNA2D4-211ENST00000540728 PRKAB2O43741 272 aa20.63■□□□□ 0.89
CACNA2D4-211ENST00000540728 GLRX3O76003 335 aaKnown RBP20.63■□□□□ 0.89
CACNA2D4-211ENST00000540728 SHMT1P34896 483 aa20.63■□□□□ 0.89
CACNA2D4-211ENST00000540728 GCLCP48506 637 aaPredicted RBP20.63■□□□□ 0.89
CACNA2D4-211ENST00000540728 IRX3P78415 501 aaPredicted RBP20.63■□□□□ 0.89
CACNA2D4-211ENST00000540728 PRKCZQ05513 592 aa20.63■□□□□ 0.89
CACNA2D4-211ENST00000540728 RAB3GAP1Q15042 981 aa20.63■□□□□ 0.89
CACNA2D4-211ENST00000540728 FEZ1Q99689 392 aa20.63■□□□□ 0.89
CACNA2D4-211ENST00000540728 SWAP70Q9UH65 585 aa20.63■□□□□ 0.89
CACNA2D4-211ENST00000540728 RNF113AO15541 343 aaKnown RBP20.62■□□□□ 0.89
CACNA2D4-211ENST00000540728 MX1P20591 662 aa20.62■□□□□ 0.89
CACNA2D4-211ENST00000540728 GABPAQ06546 454 aa20.62■□□□□ 0.89
CACNA2D4-211ENST00000540728 USP17L2Q6R6M4 530 aa20.62■□□□□ 0.89
CACNA2D4-211ENST00000540728 ANKRD13CQ8N6S4 541 aa20.62■□□□□ 0.89
CACNA2D4-211ENST00000540728 PUS7LQ9H0K6 701 aaKnown RBP20.62■□□□□ 0.89
CACNA2D4-211ENST00000540728 ASCC2Q9H1I8 757 aaPredicted RBP20.62■□□□□ 0.89
CACNA2D4-211ENST00000540728 MPHOSPH10O00566 681 aaKnown RBP20.61■□□□□ 0.89
CACNA2D4-211ENST00000540728 TNPO2O14787 897 aaKnown RBP20.61■□□□□ 0.89
CACNA2D4-211ENST00000540728 CHGBP05060 677 aa20.61■□□□□ 0.89
CACNA2D4-211ENST00000540728 EN2P19622 333 aaPredicted RBP20.61■□□□□ 0.89
CACNA2D4-211ENST00000540728 APPBP2Q92624 585 aa20.61■□□□□ 0.89
CACNA2D4-211ENST00000540728 RWDD1Q9H446 243 aaPredicted RBP20.61■□□□□ 0.89
CACNA2D4-211ENST00000540728 CYP2D6P10635 497 aa20.6■□□□□ 0.89
CACNA2D4-211ENST00000540728 HOXA7P31268 230 aaPredicted RBP20.6■□□□□ 0.89
CACNA2D4-211ENST00000540728 GRK4P32298 578 aa20.6■□□□□ 0.89
CACNA2D4-211ENST00000540728 USP14P54578 494 aa20.6■□□□□ 0.89
CACNA2D4-211ENST00000540728 FAM110CQ1W6H9 321 aa20.6■□□□□ 0.89
CACNA2D4-211ENST00000540728 OTUD7AQ8TE49 926 aaPredicted RBP20.6■□□□□ 0.89
CACNA2D4-211ENST00000540728 BIN2Q9UBW5 565 aaPredicted RBP20.6■□□□□ 0.89
CACNA2D4-211ENST00000540728 BRCA2P51587 3418 aa20.59■□□□□ 0.89
CACNA2D4-211ENST00000540728 BAZ2AQ9UIF9 1905 aaKnown RBP20.59■□□□□ 0.89
CACNA2D4-211ENST00000540728 USP17L12C9JPN9 530 aa20.59■□□□□ 0.89
CACNA2D4-211ENST00000540728 USP17L21D6R901 530 aa20.59■□□□□ 0.89
CACNA2D4-211ENST00000540728 C12orf60Q5U649 245 aa20.59■□□□□ 0.89
CACNA2D4-211ENST00000540728 PRPF38BQ5VTL8 546 aaKnown RBP20.59■□□□□ 0.89
CACNA2D4-211ENST00000540728 PI4K2BQ8TCG2 481 aa20.59■□□□□ 0.89
CACNA2D4-211ENST00000540728 STRBPQ96SI9 672 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms