RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 CDC45O75419 566 aa20■□□□□ 0.79
UBC-208ENST00000540700 CYP2D6P10635 497 aa20■□□□□ 0.79
UBC-208ENST00000540700 USP5P45974 858 aa20■□□□□ 0.79
UBC-208ENST00000540700 SH3TC2Q8TF17 1288 aa20■□□□□ 0.79
UBC-208ENST00000540700 RBBP6Q7Z6E9 1792 aaKnown RBP19.99■□□□□ 0.79
UBC-208ENST00000540700 CYP2D7A0A087X1C5 515 aa19.99■□□□□ 0.79
UBC-208ENST00000540700 ECM2O94769 699 aaPredicted RBP19.99■□□□□ 0.79
UBC-208ENST00000540700 TNFAIP1Q13829 316 aa19.99■□□□□ 0.79
UBC-208ENST00000540700 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.99■□□□□ 0.79
UBC-208ENST00000540700 FAM43AQ8N2R8 423 aa19.99■□□□□ 0.79
UBC-208ENST00000540700 ESYT1Q9BSJ8 1104 aa19.99■□□□□ 0.79
UBC-208ENST00000540700 PALD1Q9ULE6 856 aa19.99■□□□□ 0.79
UBC-208ENST00000540700 COL2A1P02458 1487 aaPredicted RBP19.99■□□□□ 0.79
UBC-208ENST00000540700 RANBP2P49792 3224 aaKnown RBP19.98■□□□□ 0.79
UBC-208ENST00000540700 PATL2C9JE40 543 aaKnown RBP19.98■□□□□ 0.79
UBC-208ENST00000540700 HSPD1P10809 573 aaKnown RBP19.98■□□□□ 0.79
UBC-208ENST00000540700 TNNI2P48788 182 aa19.98■□□□□ 0.79
UBC-208ENST00000540700 GTF2A2P52657 109 aa19.98■□□□□ 0.79
UBC-208ENST00000540700 VGLL4Q14135 290 aa19.98■□□□□ 0.79
UBC-208ENST00000540700 OTUD5Q96G74 571 aa19.98■□□□□ 0.79
UBC-208ENST00000540700 ARHGAP39Q9C0H5 1083 aa19.98■□□□□ 0.79
UBC-208ENST00000540700 ATP8A2Q9NTI2 1148 aa19.98■□□□□ 0.79
UBC-208ENST00000540700 RAD50Q92878 1312 aa19.98■□□□□ 0.79
UBC-208ENST00000540700 PLCD1P51178 756 aa19.97■□□□□ 0.79
UBC-208ENST00000540700 PTH1RQ03431 593 aa19.97■□□□□ 0.79
UBC-208ENST00000540700 CHRDL2Q6WN34 429 aa19.97■□□□□ 0.79
UBC-208ENST00000540700 IFNL3Q8IZI9 196 aa19.97■□□□□ 0.79
UBC-208ENST00000540700 GNAT2P19087 354 aa19.96■□□□□ 0.79
UBC-208ENST00000540700 MAP3K9P80192 1104 aa19.96■□□□□ 0.79
UBC-208ENST00000540700 CTR9Q6PD62 1173 aa19.96■□□□□ 0.79
UBC-208ENST00000540700 DNAJC18Q9H819 358 aa19.96■□□□□ 0.79
UBC-208ENST00000540700 MCM9Q9NXL9 1143 aa19.96■□□□□ 0.79
UBC-208ENST00000540700 CSADQ9Y600 493 aa19.96■□□□□ 0.79
UBC-208ENST00000540700 BAZ2AQ9UIF9 1905 aaKnown RBP19.96■□□□□ 0.79
UBC-208ENST00000540700 FAM196BA6NMK8 535 aa19.95■□□□□ 0.78
UBC-208ENST00000540700 KIF22Q14807 665 aa19.95■□□□□ 0.78
UBC-208ENST00000540700 USP17L12C9JPN9 530 aa19.94■□□□□ 0.78
UBC-208ENST00000540700 USP17L21D6R901 530 aa19.94■□□□□ 0.78
UBC-208ENST00000540700 GIMAP6Q6P9H5 292 aa19.94■□□□□ 0.78
UBC-208ENST00000540700 MIGA2Q7L4E1 593 aa19.94■□□□□ 0.78
UBC-208ENST00000540700 ZSCAN29Q8IWY8 852 aaPredicted RBP19.94■□□□□ 0.78
UBC-208ENST00000540700 RUFY2Q8WXA3 655 aa19.94■□□□□ 0.78
UBC-208ENST00000540700 LSG1Q9H089 658 aaKnown RBP19.94■□□□□ 0.78
UBC-208ENST00000540700 TACC3Q9Y6A5 838 aa19.94■□□□□ 0.78
UBC-208ENST00000540700 MYH1P12882 1939 aa19.94■□□□□ 0.78
UBC-208ENST00000540700 FGAP02671 866 aa19.93■□□□□ 0.78
UBC-208ENST00000540700 APPP05067 770 aa19.93■□□□□ 0.78
UBC-208ENST00000540700 RRP1BQ14684 758 aaKnown RBP19.93■□□□□ 0.78
UBC-208ENST00000540700 ALX1Q15699 326 aa19.93■□□□□ 0.78
UBC-208ENST00000540700 C12orf60Q5U649 245 aa19.93■□□□□ 0.78
UBC-208ENST00000540700 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.93■□□□□ 0.78
UBC-208ENST00000540700 DPF3Q92784 378 aa19.93■□□□□ 0.78
UBC-208ENST00000540700 DYNLL2Q96FJ2 89 aa19.93■□□□□ 0.78
UBC-208ENST00000540700 LAMB1P07942 1786 aa19.93■□□□□ 0.78
UBC-208ENST00000540700 TDO2P48775 406 aa19.92■□□□□ 0.78
UBC-208ENST00000540700 LACTBP83111 547 aaPredicted RBP19.92■□□□□ 0.78
UBC-208ENST00000540700 MAP3K10Q02779 954 aa19.92■□□□□ 0.78
UBC-208ENST00000540700 GABPAQ06546 454 aa19.92■□□□□ 0.78
UBC-208ENST00000540700 C8orf34Q49A92 452 aa19.92■□□□□ 0.78
UBC-208ENST00000540700 SBK1Q52WX2 424 aa19.92■□□□□ 0.78
UBC-208ENST00000540700 METTL16Q86W50 562 aaKnown RBP19.92■□□□□ 0.78
UBC-208ENST00000540700 DSCC1Q9BVC3 393 aa19.92■□□□□ 0.78
UBC-208ENST00000540700 OTOFQ9HC10 1997 aa19.92■□□□□ 0.78
UBC-208ENST00000540700 BTBD19C9JJ37 291 aa19.91■□□□□ 0.78
UBC-208ENST00000540700 TLR2O60603 784 aa19.91■□□□□ 0.78
UBC-208ENST00000540700 POLR3DP05423 398 aaPredicted RBP19.91■□□□□ 0.78
UBC-208ENST00000540700 CETPP11597 493 aa19.91■□□□□ 0.78
UBC-208ENST00000540700 SLC44A5Q8NCS7 719 aa19.91■□□□□ 0.78
UBC-208ENST00000540700 NBPF3Q9H094 633 aa19.91■□□□□ 0.78
UBC-208ENST00000540700 NAPBQ9H115 298 aa19.91■□□□□ 0.78
UBC-208ENST00000540700 DHX36Q9H2U1 1008 aaKnown RBP19.91■□□□□ 0.78
UBC-208ENST00000540700 RBM27Q9P2N5 1060 aaKnown RBP19.91■□□□□ 0.78
UBC-208ENST00000540700 SPDYE5A6NIY4 337 aa19.9■□□□□ 0.78
UBC-208ENST00000540700 MFAP1P55081 439 aaKnown RBP19.9■□□□□ 0.78
UBC-208ENST00000540700 MTFR1Q15390 333 aa19.9■□□□□ 0.78
UBC-208ENST00000540700 SHROOM1Q2M3G4 852 aaPredicted RBP19.9■□□□□ 0.78
UBC-208ENST00000540700 PI4KBQ9UBF8 816 aa19.9■□□□□ 0.78
UBC-208ENST00000540700 ARPP21Q9UBL0 812 aaPredicted RBP19.9■□□□□ 0.78
UBC-208ENST00000540700 TAF6LQ9Y6J9 622 aa19.9■□□□□ 0.78
UBC-208ENST00000540700 ZMYM6O95789 1325 aa19.9■□□□□ 0.78
UBC-208ENST00000540700 PHF20L1A8MW92 1017 aa19.89■□□□□ 0.77
UBC-208ENST00000540700 MINDY4BA8MYZ0 360 aa19.89■□□□□ 0.77
UBC-208ENST00000540700 SEC24BO95487 1268 aa19.89■□□□□ 0.77
UBC-208ENST00000540700 STK11IPQ8N1F8 1099 aa19.89■□□□□ 0.77
UBC-208ENST00000540700 NKX2-3Q8TAU0 364 aa19.89■□□□□ 0.77
UBC-208ENST00000540700 MAP4K1Q92918 833 aa19.89■□□□□ 0.77
UBC-208ENST00000540700 ZKSCAN4Q969J2 545 aaPredicted RBP19.89■□□□□ 0.77
UBC-208ENST00000540700 ROBO3Q96MS0 1386 aa19.89■□□□□ 0.77
UBC-208ENST00000540700 NACAP1Q9BZK3 213 aa19.89■□□□□ 0.77
UBC-208ENST00000540700 EHD4Q9H223 541 aa19.89■□□□□ 0.77
UBC-208ENST00000540700 INCENPQ9NQS7 918 aa19.89■□□□□ 0.77
UBC-208ENST00000540700 SNCAIPQ9Y6H5 919 aa19.89■□□□□ 0.77
UBC-208ENST00000540700 A0A0C4DFX4 3053 aa19.89■□□□□ 0.77
UBC-208ENST00000540700 IRF6O14896 467 aa19.88■□□□□ 0.77
UBC-208ENST00000540700 TBC1D12O60347 775 aa19.88■□□□□ 0.77
UBC-208ENST00000540700 HLA-DOAP06340 250 aa19.88■□□□□ 0.77
UBC-208ENST00000540700 SHMT1P34896 483 aa19.88■□□□□ 0.77
UBC-208ENST00000540700 HAND2P61296 217 aa19.88■□□□□ 0.77
UBC-208ENST00000540700 JAG1P78504 1218 aa19.88■□□□□ 0.77
UBC-208ENST00000540700 CTDSPL2Q05D32 466 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms