RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 CDX2Q99626 313 aaPredicted RBP13.89□□□□□ -0.19
TMEM258-205ENST00000540434 KCNH4Q9UQ05 1017 aa13.89□□□□□ -0.19
TMEM258-205ENST00000540434 AK9Q5TCS8 1911 aa13.89□□□□□ -0.19
TMEM258-205ENST00000540434 DNAH12Q6ZR08 3092 aa13.89□□□□□ -0.19
TMEM258-205ENST00000540434 GOLIM4O00461 696 aa13.88□□□□□ -0.19
TMEM258-205ENST00000540434 INPP5BP32019 993 aa13.88□□□□□ -0.19
TMEM258-205ENST00000540434 ANKRD45Q5TZF3 282 aa13.88□□□□□ -0.19
TMEM258-205ENST00000540434 B4GALNT3Q6L9W6 998 aa13.88□□□□□ -0.19
TMEM258-205ENST00000540434 SH3RF3Q8TEJ3 882 aaPredicted RBP13.88□□□□□ -0.19
TMEM258-205ENST00000540434 CDK5RAP2Q96SN8 1893 aa13.88□□□□□ -0.19
TMEM258-205ENST00000540434 CDH23Q9H251 3354 aa13.87□□□□□ -0.19
TMEM258-205ENST00000540434 IDH1O75874 414 aaKnown RBP13.87□□□□□ -0.19
TMEM258-205ENST00000540434 CAPN2P17655 700 aa13.87□□□□□ -0.19
TMEM258-205ENST00000540434 RGS3P49796 1198 aa13.87□□□□□ -0.19
TMEM258-205ENST00000540434 FKBP1CQ5VVH2 108 aa13.87□□□□□ -0.19
TMEM258-205ENST00000540434 FAM109BQ6ICB4 259 aaPredicted RBP13.87□□□□□ -0.19
TMEM258-205ENST00000540434 NAA16Q6N069 864 aaPredicted RBP13.87□□□□□ -0.19
TMEM258-205ENST00000540434 GPAT2Q6NUI2 795 aa13.87□□□□□ -0.19
TMEM258-205ENST00000540434 FAM83AQ86UY5 434 aa13.87□□□□□ -0.19
TMEM258-205ENST00000540434 SMC5Q8IY18 1101 aa13.87□□□□□ -0.19
TMEM258-205ENST00000540434 MAGEB6Q8N7X4 407 aa13.87□□□□□ -0.19
TMEM258-205ENST00000540434 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.87□□□□□ -0.19
TMEM258-205ENST00000540434 MYLIPQ8WY64 445 aa13.87□□□□□ -0.19
TMEM258-205ENST00000540434 HAUS7Q99871 368 aa13.87□□□□□ -0.19
TMEM258-205ENST00000540434 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.87□□□□□ -0.19
TMEM258-205ENST00000540434 AATFQ9NY61 560 aaKnown RBP eCLIP13.87□□□□□ -0.19
TMEM258-205ENST00000540434 MAST2Q6P0Q8 1798 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 PTPRFP10586 1907 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 TCRBV5S4A2TA0A5A2 114 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 DDTLA6NHG4 134 aaPredicted RBP13.86□□□□□ -0.19
TMEM258-205ENST00000540434 MAP4K4O95819 1239 aaPredicted RBP13.86□□□□□ -0.19
TMEM258-205ENST00000540434 CYP7A1P22680 504 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 PPP4CP60510 307 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 TRIM32Q13049 653 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 MIGA2Q7L4E1 593 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 MIGA1Q8NAN2 632 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 PI4K2BQ8TCG2 481 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 PXYLP1Q8TE99 480 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 FAM151AQ8WW52 585 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 FAM122AQ96E09 287 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 IDI2Q9BXS1 227 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 C11orf49Q9H6J7 331 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 ECHDC1Q9NTX5 307 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 ZNF112Q9UJU3 913 aa13.86□□□□□ -0.19
TMEM258-205ENST00000540434 DDX60LQ5H9U9 1706 aaKnown RBP13.86□□□□□ -0.19
TMEM258-205ENST00000540434 PICALMQ13492 652 aa13.85□□□□□ -0.19
TMEM258-205ENST00000540434 ZNF697Q5TEC3 545 aa13.85□□□□□ -0.19
TMEM258-205ENST00000540434 ZNF341Q9BYN7 854 aa13.85□□□□□ -0.19
TMEM258-205ENST00000540434 NBPF3Q9H094 633 aa13.85□□□□□ -0.19
TMEM258-205ENST00000540434 PAG1Q9NWQ8 432 aa13.85□□□□□ -0.19
TMEM258-205ENST00000540434 ATRNL1Q5VV63 1379 aa13.84□□□□□ -0.19
TMEM258-205ENST00000540434 TMEM265A0A087WTH1 108 aa13.84□□□□□ -0.19
TMEM258-205ENST00000540434 TNFRSF10AO00220 468 aa13.84□□□□□ -0.19
TMEM258-205ENST00000540434 LDHCP07864 332 aa13.84□□□□□ -0.19
TMEM258-205ENST00000540434 PDE6AP16499 860 aa13.84□□□□□ -0.19
TMEM258-205ENST00000540434 GSTO1P78417 241 aa13.84□□□□□ -0.19
TMEM258-205ENST00000540434 EVX2Q03828 476 aa13.84□□□□□ -0.19
TMEM258-205ENST00000540434 IRF5Q13568 498 aa13.84□□□□□ -0.19
TMEM258-205ENST00000540434 AAMPQ13685 434 aa13.84□□□□□ -0.19
TMEM258-205ENST00000540434 DCAF15Q66K64 600 aa13.84□□□□□ -0.19
TMEM258-205ENST00000540434 RIOK1Q9BRS2 568 aaKnown RBP13.84□□□□□ -0.19
TMEM258-205ENST00000540434 LNPKQ9C0E8 428 aa13.84□□□□□ -0.19
TMEM258-205ENST00000540434 RWDD1Q9H446 243 aaPredicted RBP13.84□□□□□ -0.19
TMEM258-205ENST00000540434 PFASO15067 1338 aa13.84□□□□□ -0.19
TMEM258-205ENST00000540434 RPAP1Q9BWH6 1393 aaPredicted RBP13.83□□□□□ -0.19
TMEM258-205ENST00000540434 SIPA1L1O43166 1804 aa13.83□□□□□ -0.2
TMEM258-205ENST00000540434 COL2A1P02458 1487 aaPredicted RBP13.83□□□□□ -0.2
TMEM258-205ENST00000540434 TNPO2O14787 897 aaKnown RBP13.83□□□□□ -0.2
TMEM258-205ENST00000540434 RRP1BQ14684 758 aaKnown RBP13.83□□□□□ -0.2
TMEM258-205ENST00000540434 SLC9C2Q5TAH2 1124 aa13.83□□□□□ -0.2
TMEM258-205ENST00000540434 SLF2Q8IX21 1173 aa13.83□□□□□ -0.2
TMEM258-205ENST00000540434 HOOK2Q96ED9 719 aa13.83□□□□□ -0.2
TMEM258-205ENST00000540434 PARK7Q99497 189 aaKnown RBP13.83□□□□□ -0.2
TMEM258-205ENST00000540434 TMOD2Q9NZR1 351 aa13.83□□□□□ -0.2
TMEM258-205ENST00000540434 ZNF532Q9HCE3 1301 aa13.83□□□□□ -0.2
TMEM258-205ENST00000540434 PHIPQ8WWQ0 1821 aa13.83□□□□□ -0.2
TMEM258-205ENST00000540434 FAM196BA6NMK8 535 aa13.82□□□□□ -0.2
TMEM258-205ENST00000540434 ENTPD3O75355 529 aa13.82□□□□□ -0.2
TMEM258-205ENST00000540434 NUCB1Q02818 461 aa13.82□□□□□ -0.2
TMEM258-205ENST00000540434 MAP3K12Q12852 859 aa13.82□□□□□ -0.2
TMEM258-205ENST00000540434 NOL9Q5SY16 702 aaKnown RBP13.82□□□□□ -0.2
TMEM258-205ENST00000540434 MAPKAPK5Q8IW41 473 aa13.82□□□□□ -0.2
TMEM258-205ENST00000540434 TEX11Q8IYF3 940 aa13.82□□□□□ -0.2
TMEM258-205ENST00000540434 ANKLE1Q8NAG6 615 aa13.82□□□□□ -0.2
TMEM258-205ENST00000540434 TGFBRAP1Q8WUH2 860 aa13.82□□□□□ -0.2
TMEM258-205ENST00000540434 SYMPKQ92797 1274 aaKnown RBP13.82□□□□□ -0.2
TMEM258-205ENST00000540434 SEMA6BQ9H3T3 888 aa13.82□□□□□ -0.2
TMEM258-205ENST00000540434 FOCADQ5VW36 1801 aa13.82□□□□□ -0.2
TMEM258-205ENST00000540434 PHF20L1A8MW92 1017 aa13.81□□□□□ -0.2
TMEM258-205ENST00000540434 SMIM22K7EJ46 135 aa13.81□□□□□ -0.2
TMEM258-205ENST00000540434 CXCL11O14625 94 aa13.81□□□□□ -0.2
TMEM258-205ENST00000540434 MX1P20591 662 aa13.81□□□□□ -0.2
TMEM258-205ENST00000540434 PDE4AP27815 886 aa13.81□□□□□ -0.2
TMEM258-205ENST00000540434 HOXD11P31277 338 aaPredicted RBP13.81□□□□□ -0.2
TMEM258-205ENST00000540434 ADD2P35612 726 aa13.81□□□□□ -0.2
TMEM258-205ENST00000540434 PDE1AP54750 535 aa13.81□□□□□ -0.2
TMEM258-205ENST00000540434 LRRC26Q2I0M4 334 aa13.81□□□□□ -0.2
TMEM258-205ENST00000540434 OSBPL5Q9H0X9 879 aaPredicted RBP13.81□□□□□ -0.2
TMEM258-205ENST00000540434 TTYH1Q9H313 450 aaPredicted RBP13.81□□□□□ -0.2
TMEM258-205ENST00000540434 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms