RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 DAGLAQ9Y4D2 1042 aa14.03□□□□□ -0.16
CYB561A3-215ENST00000540317 PDS5AQ29RF7 1337 aaKnown RBP14.02□□□□□ -0.16
CYB561A3-215ENST00000540317 SALL1Q9NSC2 1324 aa14.02□□□□□ -0.16
CYB561A3-215ENST00000540317 GOLGA6L3A6NEY3 463 aa14.02□□□□□ -0.16
CYB561A3-215ENST00000540317 FKBP1CQ5VVH2 108 aa14.02□□□□□ -0.16
CYB561A3-215ENST00000540317 SPTY2D1Q68D10 685 aaPredicted RBP14.02□□□□□ -0.16
CYB561A3-215ENST00000540317 DZIP1Q86YF9 867 aaKnown RBP14.02□□□□□ -0.16
CYB561A3-215ENST00000540317 NCOA7Q8NI08 942 aa14.02□□□□□ -0.16
CYB561A3-215ENST00000540317 ZNF274Q96GC6 653 aaPredicted RBP14.02□□□□□ -0.16
CYB561A3-215ENST00000540317 KIF3AQ9Y496 699 aa14.02□□□□□ -0.16
CYB561A3-215ENST00000540317 SSC5DA1L4H1 1573 aa14.02□□□□□ -0.17
CYB561A3-215ENST00000540317 MYO5AQ9Y4I1 1855 aaKnown RBP14.02□□□□□ -0.17
CYB561A3-215ENST00000540317 DOCK2Q92608 1830 aa14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 FOXP2O15409 715 aa14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 PFKFB2O60825 505 aa14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 PRPF40AO75400 957 aaKnown RBP14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 TBC1D8O95759 1140 aa14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 F13A1P00488 732 aa14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 NCLP19338 710 aaKnown RBP14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 MCM5P33992 734 aa14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 ST3GAL1Q11201 340 aa14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 TCP10Q12799 353 aa14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 TRDNQ13061 729 aa14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 LARP1BQ659C4 914 aaKnown RBP14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 CDC42EP5Q6NZY7 148 aa14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 FAM83AQ86UY5 434 aa14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 NECAB1Q8N987 351 aa14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 TCEANC2Q96MN5 208 aa14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 STRBPQ96SI9 672 aaKnown RBP14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 GZF1Q9H116 711 aaPredicted RBP14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 USP40Q9NVE5 1235 aa14.01□□□□□ -0.17
CYB561A3-215ENST00000540317 MANSC4A6NHS7 340 aaPredicted RBP14□□□□□ -0.17
CYB561A3-215ENST00000540317 PATL2C9JE40 543 aaKnown RBP14□□□□□ -0.17
CYB561A3-215ENST00000540317 ZBTB48P10074 688 aaPredicted RBP14□□□□□ -0.17
CYB561A3-215ENST00000540317 EVCP57679 992 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 INHBEP58166 350 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 MAP3K9P80192 1104 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 RALYLQ86SE5 291 aaKnown RBP14□□□□□ -0.17
CYB561A3-215ENST00000540317 SLF2Q8IX21 1173 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 MAGEB6Q8N7X4 407 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 TMEM87AQ8NBN3 555 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 BRF1Q92994 677 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 HOOK2Q96ED9 719 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 ABHD8Q96I13 439 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 WNK4Q96J92 1243 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 ELP3Q9H9T3 547 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 LRP2BPQ9P2M1 347 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 ECM29Q5VYK3 1845 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 FSD2A1L4K1 749 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 HMGN5P82970 282 aaKnown RBP14□□□□□ -0.17
CYB561A3-215ENST00000540317 DGKZQ13574 1117 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 FOXD4L5Q5VV16 416 aaPredicted RBP14□□□□□ -0.17
CYB561A3-215ENST00000540317 FOXD4L4Q8WXT5 416 aaPredicted RBP14□□□□□ -0.17
CYB561A3-215ENST00000540317 NACAP1Q9BZK3 213 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 MTMR6Q9Y217 621 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 CSADQ9Y600 493 aa14□□□□□ -0.17
CYB561A3-215ENST00000540317 CASP8AP2Q9UKL3 1982 aa13.99□□□□□ -0.17
CYB561A3-215ENST00000540317 APPP05067 770 aa13.99□□□□□ -0.17
CYB561A3-215ENST00000540317 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.99□□□□□ -0.17
CYB561A3-215ENST00000540317 MIGA2Q7L4E1 593 aa13.99□□□□□ -0.17
CYB561A3-215ENST00000540317 FAM151AQ8WW52 585 aa13.99□□□□□ -0.17
CYB561A3-215ENST00000540317 OPTNQ96CV9 577 aa13.99□□□□□ -0.17
CYB561A3-215ENST00000540317 DHX16O60231 1041 aaKnown RBP13.98□□□□□ -0.17
CYB561A3-215ENST00000540317 MECOMQ03112 1051 aa13.98□□□□□ -0.17
CYB561A3-215ENST00000540317 NFIAQ12857 509 aa13.98□□□□□ -0.17
CYB561A3-215ENST00000540317 COL9A3Q14050 684 aaPredicted RBP13.98□□□□□ -0.17
CYB561A3-215ENST00000540317 VGLL4Q14135 290 aa13.98□□□□□ -0.17
CYB561A3-215ENST00000540317 DCAF15Q66K64 600 aa13.98□□□□□ -0.17
CYB561A3-215ENST00000540317 MB21D2Q8IYB1 491 aaPredicted RBP13.98□□□□□ -0.17
CYB561A3-215ENST00000540317 WRNIP1Q96S55 665 aa13.98□□□□□ -0.17
CYB561A3-215ENST00000540317 MCOLN1Q9GZU1 580 aa13.98□□□□□ -0.17
CYB561A3-215ENST00000540317 RAI14Q9P0K7 980 aa13.98□□□□□ -0.17
CYB561A3-215ENST00000540317 MBD4O95243 580 aa13.97□□□□□ -0.17
CYB561A3-215ENST00000540317 ALDH1A1P00352 501 aa13.97□□□□□ -0.17
CYB561A3-215ENST00000540317 MRE11P49959 708 aa13.97□□□□□ -0.17
CYB561A3-215ENST00000540317 STK3Q13188 491 aa13.97□□□□□ -0.17
CYB561A3-215ENST00000540317 OTUD7BQ6GQQ9 843 aa13.97□□□□□ -0.17
CYB561A3-215ENST00000540317 IFNL1Q8IU54 200 aa13.97□□□□□ -0.17
CYB561A3-215ENST00000540317 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.97□□□□□ -0.17
CYB561A3-215ENST00000540317 SMARCC2Q8TAQ2 1214 aa13.97□□□□□ -0.17
CYB561A3-215ENST00000540317 SYAP1Q96A49 352 aaPredicted RBP13.97□□□□□ -0.17
CYB561A3-215ENST00000540317 CNNM2Q9H8M5 875 aa13.97□□□□□ -0.17
CYB561A3-215ENST00000540317 MYH13Q9UKX3 1938 aa13.97□□□□□ -0.17
CYB561A3-215ENST00000540317 VPS37CA5D8V6 355 aaPredicted RBP13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 CCDC85CA6NKD9 419 aa13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 PRC1O43663 620 aa13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 LDHCP07864 332 aa13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 GJA5P36382 358 aa13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 BTDP43251 543 aa13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 HAND2P61296 217 aa13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 APOBRQ0VD83 1088 aa13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 ZSCAN29Q8IWY8 852 aaPredicted RBP13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 FAM184AQ8NB25 1140 aa13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 CNKSR2Q8WXI2 1034 aa13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 ZKSCAN4Q969J2 545 aaPredicted RBP13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 OTUD5Q96G74 571 aa13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 FAM163AQ96GL9 167 aaPredicted RBP13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 NAPBQ9H115 298 aa13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 FAM198AQ9UFP1 575 aa13.96□□□□□ -0.17
CYB561A3-215ENST00000540317 CYP7A1P22680 504 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms