RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 WDR18Q9BV38 432 aa17.47■□□□□ 0.39
SEMA4D-222ENST00000540183 CCDC8Q9H0W5 538 aaPredicted RBP17.47■□□□□ 0.39
SEMA4D-222ENST00000540183 AS3MTQ9HBK9 375 aa17.47■□□□□ 0.39
SEMA4D-222ENST00000540183 TXNRD2Q9NNW7 524 aa17.47■□□□□ 0.39
SEMA4D-222ENST00000540183 DBNLQ9UJU6 430 aaKnown RBP17.47■□□□□ 0.39
SEMA4D-222ENST00000540183 NAV1Q8NEY1 1877 aa17.47■□□□□ 0.39
SEMA4D-222ENST00000540183 BAG3O95817 575 aa17.46■□□□□ 0.39
SEMA4D-222ENST00000540183 BACE1P56817 501 aa17.46■□□□□ 0.39
SEMA4D-222ENST00000540183 PABPC4Q13310 644 aaKnown RBP eCLIP17.46■□□□□ 0.39
SEMA4D-222ENST00000540183 TBC1D2Q9BYX2 928 aa17.46■□□□□ 0.39
SEMA4D-222ENST00000540183 LAMA3Q16787 3333 aa17.46■□□□□ 0.39
SEMA4D-222ENST00000540183 POTEEQ6S8J3 1075 aa17.45■□□□□ 0.38
SEMA4D-222ENST00000540183 CRACR2BQ8N4Y2 399 aaPredicted RBP17.45■□□□□ 0.38
SEMA4D-222ENST00000540183 TRIB2Q92519 343 aa17.45■□□□□ 0.38
SEMA4D-222ENST00000540183 DHX36Q9H2U1 1008 aaKnown RBP17.45■□□□□ 0.38
SEMA4D-222ENST00000540183 MORF4L1Q9UBU8 362 aa17.45■□□□□ 0.38
SEMA4D-222ENST00000540183 ZBTB21Q9ULJ3 1066 aa17.45■□□□□ 0.38
SEMA4D-222ENST00000540183 NR2E3Q9Y5X4 410 aa17.45■□□□□ 0.38
SEMA4D-222ENST00000540183 EVI5O60447 810 aa17.44■□□□□ 0.38
SEMA4D-222ENST00000540183 HMGCRP04035 888 aa17.44■□□□□ 0.38
SEMA4D-222ENST00000540183 ASNSP08243 561 aa17.44■□□□□ 0.38
SEMA4D-222ENST00000540183 PLCG2P16885 1265 aa17.44■□□□□ 0.38
SEMA4D-222ENST00000540183 CYP2B6P20813 491 aa17.44■□□□□ 0.38
SEMA4D-222ENST00000540183 CYP7A1P22680 504 aa17.44■□□□□ 0.38
SEMA4D-222ENST00000540183 IRX3P78415 501 aaPredicted RBP17.44■□□□□ 0.38
SEMA4D-222ENST00000540183 METTL16Q86W50 562 aaKnown RBP17.44■□□□□ 0.38
SEMA4D-222ENST00000540183 MIGA1Q8NAN2 632 aa17.44■□□□□ 0.38
SEMA4D-222ENST00000540183 EAF2Q96CJ1 260 aaPredicted RBP17.44■□□□□ 0.38
SEMA4D-222ENST00000540183 TMOD4Q9NZQ9 345 aa17.44■□□□□ 0.38
SEMA4D-222ENST00000540183 MYH8P13535 1937 aa17.44■□□□□ 0.38
SEMA4D-222ENST00000540183 SOX1O00570 391 aaPredicted RBP17.43■□□□□ 0.38
SEMA4D-222ENST00000540183 MNX1P50219 401 aaPredicted RBP17.43■□□□□ 0.38
SEMA4D-222ENST00000540183 HERVK_113P62684 666 aa17.43■□□□□ 0.38
SEMA4D-222ENST00000540183 Q3C1V9 767 aa17.43■□□□□ 0.38
SEMA4D-222ENST00000540183 FOXP4Q8IVH2 680 aaPredicted RBP17.43■□□□□ 0.38
SEMA4D-222ENST00000540183 ITPRIPQ8IWB1 547 aa17.43■□□□□ 0.38
SEMA4D-222ENST00000540183 TRIM34Q9BYJ4 488 aa17.43■□□□□ 0.38
SEMA4D-222ENST00000540183 ANTXR1Q9H6X2 564 aa17.43■□□□□ 0.38
SEMA4D-222ENST00000540183 RBPJLQ9UBG7 517 aa17.43■□□□□ 0.38
SEMA4D-222ENST00000540183 STAP2Q9UGK3 403 aa17.43■□□□□ 0.38
SEMA4D-222ENST00000540183 USP17L10C9JJH3 530 aa17.42■□□□□ 0.38
SEMA4D-222ENST00000540183 IDH1O75874 414 aaKnown RBP17.42■□□□□ 0.38
SEMA4D-222ENST00000540183 HOXA7P31268 230 aaPredicted RBP17.42■□□□□ 0.38
SEMA4D-222ENST00000540183 ZNF512BQ96KM6 892 aaPredicted RBP17.42■□□□□ 0.38
SEMA4D-222ENST00000540183 EMILIN3Q9NT22 766 aa17.42■□□□□ 0.38
SEMA4D-222ENST00000540183 NOP58Q9Y2X3 529 aaKnown RBP17.42■□□□□ 0.38
SEMA4D-222ENST00000540183 GH2P01242 217 aa17.41■□□□□ 0.38
SEMA4D-222ENST00000540183 ZYXQ15942 572 aaKnown RBP17.41■□□□□ 0.38
SEMA4D-222ENST00000540183 NECAB2Q7Z6G3 386 aa17.41■□□□□ 0.38
SEMA4D-222ENST00000540183 C7orf61Q8IZ16 206 aa17.41■□□□□ 0.38
SEMA4D-222ENST00000540183 MAGEB6Q8N7X4 407 aa17.41■□□□□ 0.38
SEMA4D-222ENST00000540183 PAGR1Q9BTK6 254 aa17.41■□□□□ 0.38
SEMA4D-222ENST00000540183 PORCNQ9H237 461 aa17.41■□□□□ 0.38
SEMA4D-222ENST00000540183 HMX1Q9NP08 348 aaPredicted RBP17.41■□□□□ 0.38
SEMA4D-222ENST00000540183 ZMYND8Q9ULU4 1186 aaPredicted RBP17.41■□□□□ 0.38
SEMA4D-222ENST00000540183 RPTORQ8N122 1335 aa17.41■□□□□ 0.38
SEMA4D-222ENST00000540183 BAZ2AQ9UIF9 1905 aaKnown RBP17.41■□□□□ 0.38
SEMA4D-222ENST00000540183 C19orf81C9J6K1 198 aa17.4■□□□□ 0.38
SEMA4D-222ENST00000540183 CCL14Q16627 93 aa17.4■□□□□ 0.38
SEMA4D-222ENST00000540183 FTSJ3Q8IY81 847 aaKnown RBP17.4■□□□□ 0.38
SEMA4D-222ENST00000540183 GPRC5AQ8NFJ5 357 aa17.4■□□□□ 0.38
SEMA4D-222ENST00000540183 EXOC6BQ9Y2D4 811 aa17.4■□□□□ 0.38
SEMA4D-222ENST00000540183 HLA-DOAP06340 250 aa17.39■□□□□ 0.37
SEMA4D-222ENST00000540183 PRKAR2AP13861 404 aaKnown RBP17.39■□□□□ 0.37
SEMA4D-222ENST00000540183 ERVK-9P63128 1117 aa17.39■□□□□ 0.37
SEMA4D-222ENST00000540183 ERVK-24P63145 666 aa17.39■□□□□ 0.37
SEMA4D-222ENST00000540183 HNRNPUQ00839 825 aaKnown RBP eCLIP17.39■□□□□ 0.37
SEMA4D-222ENST00000540183 EVX2Q03828 476 aa17.39■□□□□ 0.37
SEMA4D-222ENST00000540183 LRCH3Q96II8 777 aa17.39■□□□□ 0.37
SEMA4D-222ENST00000540183 RLFQ13129 1914 aa17.39■□□□□ 0.37
SEMA4D-222ENST00000540183 COL6A3P12111 3177 aa17.38■□□□□ 0.37
SEMA4D-222ENST00000540183 CNMDO75829 334 aa17.38■□□□□ 0.37
SEMA4D-222ENST00000540183 SYN1P17600 705 aa17.38■□□□□ 0.37
SEMA4D-222ENST00000540183 USP5P45974 858 aa17.38■□□□□ 0.37
SEMA4D-222ENST00000540183 MAP3K21Q5TCX8 1036 aa17.38■□□□□ 0.37
SEMA4D-222ENST00000540183 CEP85Q6P2H3 762 aa17.38■□□□□ 0.37
SEMA4D-222ENST00000540183 USP17L2Q6R6M4 530 aa17.38■□□□□ 0.37
SEMA4D-222ENST00000540183 USP6NLQ92738 828 aa17.38■□□□□ 0.37
SEMA4D-222ENST00000540183 NUDT12Q9BQG2 462 aa17.38■□□□□ 0.37
SEMA4D-222ENST00000540183 MYH7P12883 1935 aa17.37■□□□□ 0.37
SEMA4D-222ENST00000540183 CCND3P30281 292 aaPredicted RBP17.37■□□□□ 0.37
SEMA4D-222ENST00000540183 CACNB2Q08289 660 aaPredicted RBP17.37■□□□□ 0.37
SEMA4D-222ENST00000540183 TATDN1Q6P1N9 297 aa17.37■□□□□ 0.37
SEMA4D-222ENST00000540183 GPR142Q7Z601 462 aa17.37■□□□□ 0.37
SEMA4D-222ENST00000540183 AACSQ86V21 672 aa17.37■□□□□ 0.37
SEMA4D-222ENST00000540183 ANKLE1Q8NAG6 615 aa17.37■□□□□ 0.37
SEMA4D-222ENST00000540183 ACER1Q8TDN7 264 aa17.37■□□□□ 0.37
SEMA4D-222ENST00000540183 GINM1Q9NU53 330 aa17.37■□□□□ 0.37
SEMA4D-222ENST00000540183 OGDHLQ9ULD0 1010 aa17.37■□□□□ 0.37
SEMA4D-222ENST00000540183 DNAH12Q6ZR08 3092 aa17.37■□□□□ 0.37
SEMA4D-222ENST00000540183 ZNFX1Q9P2E3 1918 aaKnown RBP17.37■□□□□ 0.37
SEMA4D-222ENST00000540183 PARP14Q460N5 1801 aa17.36■□□□□ 0.37
SEMA4D-222ENST00000540183 CAPN2P17655 700 aa17.36■□□□□ 0.37
SEMA4D-222ENST00000540183 MAPK4P31152 587 aa17.36■□□□□ 0.37
SEMA4D-222ENST00000540183 PLCD1P51178 756 aa17.36■□□□□ 0.37
SEMA4D-222ENST00000540183 RAB3GAP1Q15042 981 aa17.36■□□□□ 0.37
SEMA4D-222ENST00000540183 MORN1Q5T089 497 aa17.36■□□□□ 0.37
SEMA4D-222ENST00000540183 PANK1Q8TE04 598 aa17.36■□□□□ 0.37
SEMA4D-222ENST00000540183 NBPF3Q9H094 633 aa17.36■□□□□ 0.37
SEMA4D-222ENST00000540183 C11orf49Q9H6J7 331 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms