RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 CAPN12Q6ZSI9 719 aa5.6□□□□□ -1.51
C2CD3-214ENST00000540057 RGL4Q8IZJ4 473 aa5.6□□□□□ -1.51
C2CD3-214ENST00000540057 TTC9Q92623 222 aa5.6□□□□□ -1.51
C2CD3-214ENST00000540057 TLR7Q9NYK1 1049 aaKnown RBP5.6□□□□□ -1.51
C2CD3-214ENST00000540057 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.59□□□□□ -1.51
C2CD3-214ENST00000540057 XYLBO75191 536 aa5.59□□□□□ -1.51
C2CD3-214ENST00000540057 LMNB1P20700 586 aa5.59□□□□□ -1.51
C2CD3-214ENST00000540057 CHRNA5P30532 468 aa5.59□□□□□ -1.51
C2CD3-214ENST00000540057 HOXC9P31274 260 aa5.59□□□□□ -1.51
C2CD3-214ENST00000540057 ZMYM1Q5SVZ6 1142 aa5.59□□□□□ -1.51
C2CD3-214ENST00000540057 NBPF6Q5VWK0 638 aa5.59□□□□□ -1.51
C2CD3-214ENST00000540057 ELMSAN1Q6PJG2 1045 aa5.59□□□□□ -1.51
C2CD3-214ENST00000540057 DTWD1Q8N5C7 304 aa5.59□□□□□ -1.51
C2CD3-214ENST00000540057 PIGBQ92521 554 aa5.59□□□□□ -1.51
C2CD3-214ENST00000540057 NBPF4Q96M43 638 aa5.59□□□□□ -1.51
C2CD3-214ENST00000540057 CD163L1Q9NR16 1453 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 CGNL1Q0VF96 1302 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 MAP3K19Q56UN5 1328 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 PASKQ96RG2 1323 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 PCDH11XQ9BZA7 1347 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 PCDH11YQ9BZA8 1340 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 CYP27B1O15528 508 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 MMP20O60882 483 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 DEAF1O75398 565 aaPredicted RBP5.58□□□□□ -1.52
C2CD3-214ENST00000540057 ATG7O95352 703 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 NRG1Q02297 640 aaPredicted RBP5.58□□□□□ -1.52
C2CD3-214ENST00000540057 TMEM164Q5U3C3 297 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 C16orf46Q6P387 395 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 HFE2Q6ZVN8 426 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 FBXO11Q86XK2 927 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 CMTR1Q8N1G2 835 aaKnown RBP5.58□□□□□ -1.52
C2CD3-214ENST00000540057 USHBP1Q8N6Y0 703 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 RAPGEF4Q8WZA2 1011 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 COL26A1Q96A83 441 aa5.58□□□□□ -1.52
C2CD3-214ENST00000540057 SMG9Q9H0W8 520 aaKnown RBP5.58□□□□□ -1.52
C2CD3-214ENST00000540057 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.58□□□□□ -1.52
C2CD3-214ENST00000540057 CXXC1Q9P0U4 656 aaPredicted RBP5.58□□□□□ -1.52
C2CD3-214ENST00000540057 TMEM88BA6NKF7 163 aa5.57□□□□□ -1.52
C2CD3-214ENST00000540057 H2AFB1P0C5Y9 115 aa5.57□□□□□ -1.52
C2CD3-214ENST00000540057 H2AFB2P0C5Z0 115 aa5.57□□□□□ -1.52
C2CD3-214ENST00000540057 EIF2AK2P19525 551 aaKnown RBP5.57□□□□□ -1.52
C2CD3-214ENST00000540057 FBLN1P23142 703 aa5.57□□□□□ -1.52
C2CD3-214ENST00000540057 SOX18P35713 384 aa5.57□□□□□ -1.52
C2CD3-214ENST00000540057 MAP2K1Q02750 393 aaPredicted RBP5.57□□□□□ -1.52
C2CD3-214ENST00000540057 PRSS36Q5K4E3 855 aa5.57□□□□□ -1.52
C2CD3-214ENST00000540057 WFDC8Q8IUA0 241 aa5.57□□□□□ -1.52
C2CD3-214ENST00000540057 MKNK1Q9BUB5 465 aa5.57□□□□□ -1.52
C2CD3-214ENST00000540057 ASAP1Q9ULH1 1129 aa5.57□□□□□ -1.52
C2CD3-214ENST00000540057 DICER1Q9UPY3 1922 aaKnown RBP5.56□□□□□ -1.52
C2CD3-214ENST00000540057 PDE4DIPQ5VU43 2346 aa5.56□□□□□ -1.52
C2CD3-214ENST00000540057 RASSF10A6NK89 507 aa5.56□□□□□ -1.52
C2CD3-214ENST00000540057 J3QW42 95 aa5.56□□□□□ -1.52
C2CD3-214ENST00000540057 NFKBIEO00221 500 aa5.56□□□□□ -1.52
C2CD3-214ENST00000540057 DLL1O00548 723 aa5.56□□□□□ -1.52
C2CD3-214ENST00000540057 NOS3P29474 1203 aa5.56□□□□□ -1.52
C2CD3-214ENST00000540057 RFC4P35249 363 aa5.56□□□□□ -1.52
C2CD3-214ENST00000540057 AMPHP49418 695 aa5.56□□□□□ -1.52
C2CD3-214ENST00000540057 DDR1Q08345 913 aa5.56□□□□□ -1.52
C2CD3-214ENST00000540057 DEFB115Q30KQ5 88 aa5.56□□□□□ -1.52
C2CD3-214ENST00000540057 CLP1Q92989 425 aaKnown RBP5.56□□□□□ -1.52
C2CD3-214ENST00000540057 PLD4Q96BZ4 506 aa5.56□□□□□ -1.52
C2CD3-214ENST00000540057 NSUN5Q96P11 429 aaKnown RBP5.56□□□□□ -1.52
C2CD3-214ENST00000540057 MYH14Q7Z406 1995 aaKnown RBP5.56□□□□□ -1.52
C2CD3-214ENST00000540057 COL5A3P25940 1745 aaPredicted RBP5.56□□□□□ -1.52
C2CD3-214ENST00000540057 EDC4Q6P2E9 1401 aaKnown RBP5.56□□□□□ -1.52
C2CD3-214ENST00000540057 DLEC1Q9Y238 1755 aa5.55□□□□□ -1.52
C2CD3-214ENST00000540057 WDR33Q9C0J8 1336 aaKnown RBP5.55□□□□□ -1.52
C2CD3-214ENST00000540057 RPS6KA4O75676 772 aa5.55□□□□□ -1.52
C2CD3-214ENST00000540057 DDNO94850 711 aaPredicted RBP5.55□□□□□ -1.52
C2CD3-214ENST00000540057 WFDC12Q8WWY7 111 aa5.55□□□□□ -1.52
C2CD3-214ENST00000540057 MCOLN1Q9GZU1 580 aa5.55□□□□□ -1.52
C2CD3-214ENST00000540057 ATG3Q9NT62 314 aa5.55□□□□□ -1.52
C2CD3-214ENST00000540057 THSD7BQ9C0I4 1608 aa5.55□□□□□ -1.52
C2CD3-214ENST00000540057 CASP8AP2Q9UKL3 1982 aa5.55□□□□□ -1.52
C2CD3-214ENST00000540057 KDRP35968 1356 aa5.55□□□□□ -1.52
C2CD3-214ENST00000540057 RAB3GAP2Q9H2M9 1393 aa5.55□□□□□ -1.52
C2CD3-214ENST00000540057 CNTNAP4Q9C0A0 1308 aa5.54□□□□□ -1.52
C2CD3-214ENST00000540057 ZNF831Q5JPB2 1677 aa5.54□□□□□ -1.52
C2CD3-214ENST00000540057 AFDNP55196 1824 aaKnown RBP5.54□□□□□ -1.52
C2CD3-214ENST00000540057 POLRMTO00411 1230 aaKnown RBP5.54□□□□□ -1.52
C2CD3-214ENST00000540057 PSAPP07602 524 aa5.54□□□□□ -1.52
C2CD3-214ENST00000540057 BRD2P25440 801 aaKnown RBP5.54□□□□□ -1.52
C2CD3-214ENST00000540057 ARID4AP29374 1257 aaPredicted RBP5.54□□□□□ -1.52
C2CD3-214ENST00000540057 HDGFL2Q7Z4V5 671 aaPredicted RBP5.54□□□□□ -1.52
C2CD3-214ENST00000540057 LDHDQ86WU2 507 aa5.54□□□□□ -1.52
C2CD3-214ENST00000540057 TP53INP1Q96A56 240 aa5.54□□□□□ -1.52
C2CD3-214ENST00000540057 MEGF10Q96KG7 1140 aa5.54□□□□□ -1.52
C2CD3-214ENST00000540057 KRTAP4-8Q9BYQ9 185 aa5.54□□□□□ -1.52
C2CD3-214ENST00000540057 SLC12A5Q9H2X9 1139 aa5.54□□□□□ -1.52
C2CD3-214ENST00000540057 TMOD3Q9NYL9 352 aa5.54□□□□□ -1.52
C2CD3-214ENST00000540057 SRP68Q9UHB9 627 aaKnown RBP5.54□□□□□ -1.52
C2CD3-214ENST00000540057 RTL1A6NKG5 1358 aa5.54□□□□□ -1.52
C2CD3-214ENST00000540057 FER1L6Q2WGJ9 1857 aa5.54□□□□□ -1.52
C2CD3-214ENST00000540057 SCN4AP35499 1836 aa5.53□□□□□ -1.52
C2CD3-214ENST00000540057 USP42Q9H9J4 1324 aaKnown RBP5.53□□□□□ -1.52
C2CD3-214ENST00000540057 ADAMTSL1Q8N6G6 1762 aa5.53□□□□□ -1.52
C2CD3-214ENST00000540057 ZBTB39O15060 712 aa5.53□□□□□ -1.52
C2CD3-214ENST00000540057 TM4SF1P30408 202 aa5.53□□□□□ -1.52
C2CD3-214ENST00000540057 ZAP70P43403 619 aa5.53□□□□□ -1.52
C2CD3-214ENST00000540057 IREB2P48200 963 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms