RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 TREML2Q5T2D2 321 aa7.37□□□□□ -1.23
CPSF7-219ENST00000539952 SH3BP5LQ7L8J4 393 aa7.37□□□□□ -1.23
CPSF7-219ENST00000539952 ANKRD44Q8N8A2 993 aa7.37□□□□□ -1.23
CPSF7-219ENST00000539952 GPRC5AQ8NFJ5 357 aa7.37□□□□□ -1.23
CPSF7-219ENST00000539952 SOCS4Q8WXH5 440 aa7.37□□□□□ -1.23
CPSF7-219ENST00000539952 GUCD1Q96NT3 240 aa7.37□□□□□ -1.23
CPSF7-219ENST00000539952 ASCC2Q9H1I8 757 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-219ENST00000539952 SEMA6BQ9H3T3 888 aa7.37□□□□□ -1.23
CPSF7-219ENST00000539952 MORF4L1Q9UBU8 362 aa7.37□□□□□ -1.23
CPSF7-219ENST00000539952 NOP58Q9Y2X3 529 aaKnown RBP7.37□□□□□ -1.23
CPSF7-219ENST00000539952 DOCK3Q8IZD9 2030 aa7.37□□□□□ -1.23
CPSF7-219ENST00000539952 ZSWIM8A7E2V4 1837 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 ARAP2Q8WZ64 1704 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 GAKO14976 1311 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 PFASO15067 1338 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 COL6A3P12111 3177 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 GPR75-ASB3A0A0A6YYF3 556 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 C19orf81C9J6K1 198 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 CAP2P40123 477 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 IRX3P78415 501 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-219ENST00000539952 CACNB2Q08289 660 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-219ENST00000539952 TRIM32Q13049 653 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 PDE3AQ14432 1141 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 LHX8Q68G74 356 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 KLHDC4Q8TBB5 520 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 GTF3C2Q8WUA4 911 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-219ENST00000539952 TRIB2Q92519 343 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 CCDC136Q96JN2 1154 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 P2RX7Q99572 595 aaKnown RBP7.36□□□□□ -1.23
CPSF7-219ENST00000539952 CDX2Q99626 313 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-219ENST00000539952 WDR18Q9BV38 432 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 USP44Q9H0E7 712 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 GINM1Q9NU53 330 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 HDAC5Q9UQL6 1122 aa7.36□□□□□ -1.23
CPSF7-219ENST00000539952 ATRNL1Q5VV63 1379 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 MSCO60682 206 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 GLRX3O76003 335 aaKnown RBP7.35□□□□□ -1.23
CPSF7-219ENST00000539952 CIAO1O76071 339 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 RGS2P41220 211 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 BTDP43251 543 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 HMGCS2P54868 508 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 BACE1P56817 501 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 PICALMQ13492 652 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 ATP2B3Q16720 1220 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 LRRC26Q2I0M4 334 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 ATG9AQ7Z3C6 839 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 DZIP1Q86YF9 867 aaKnown RBP7.35□□□□□ -1.23
CPSF7-219ENST00000539952 FOXP4Q8IVH2 680 aaPredicted RBP7.35□□□□□ -1.23
CPSF7-219ENST00000539952 USP6NLQ92738 828 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 EDC3Q96F86 508 aaKnown RBP7.35□□□□□ -1.23
CPSF7-219ENST00000539952 FAM161BQ96MY7 647 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 IPO9Q96P70 1041 aaKnown RBP7.35□□□□□ -1.23
CPSF7-219ENST00000539952 LARP6Q9BRS8 491 aaKnown RBP7.35□□□□□ -1.23
CPSF7-219ENST00000539952 SENP6Q9GZR1 1112 aaPredicted RBP7.35□□□□□ -1.23
CPSF7-219ENST00000539952 DDX4Q9NQI0 724 aaKnown RBP7.35□□□□□ -1.23
CPSF7-219ENST00000539952 WDR70Q9NW82 654 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 TMOD4Q9NZQ9 345 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 ABCF2Q9UG63 623 aa7.35□□□□□ -1.23
CPSF7-219ENST00000539952 HERC5Q9UII4 1024 aaKnown RBP7.35□□□□□ -1.23
CPSF7-219ENST00000539952 MGAMO43451 1857 aa7.34□□□□□ -1.23
CPSF7-219ENST00000539952 USP17L10C9JJH3 530 aa7.34□□□□□ -1.23
CPSF7-219ENST00000539952 ZKSCAN1P17029 563 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-219ENST00000539952 IL15P40933 162 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-219ENST00000539952 RFX5P48382 616 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-219ENST00000539952 CCNA1P78396 465 aa7.34□□□□□ -1.23
CPSF7-219ENST00000539952 GSTO1P78417 241 aa7.34□□□□□ -1.23
CPSF7-219ENST00000539952 SMAD3P84022 425 aaKnown RBP7.34□□□□□ -1.23
CPSF7-219ENST00000539952 Q3C1V9 767 aa7.34□□□□□ -1.23
CPSF7-219ENST00000539952 MFSD14CQ5VZR4 134 aa7.34□□□□□ -1.23
CPSF7-219ENST00000539952 PLEKHH3Q7Z736 793 aa7.34□□□□□ -1.23
CPSF7-219ENST00000539952 MAFAQ8NHW3 353 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-219ENST00000539952 SP7Q8TDD2 431 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-219ENST00000539952 DHX36Q9H2U1 1008 aaKnown RBP7.34□□□□□ -1.23
CPSF7-219ENST00000539952 PI4KBQ9UBF8 816 aa7.34□□□□□ -1.23
CPSF7-219ENST00000539952 RBPJLQ9UBG7 517 aa7.34□□□□□ -1.23
CPSF7-219ENST00000539952 SALL2Q9Y467 1007 aaPredicted RBP7.34□□□□□ -1.23
CPSF7-219ENST00000539952 PTPRCP08575 1304 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 PDS5AQ29RF7 1337 aaKnown RBP7.33□□□□□ -1.24
CPSF7-219ENST00000539952 TMEM265A0A087WTH1 108 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 ASNSP08243 561 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 SLURP2P0DP57 97 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 MS4A1P11836 297 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 CCND3P30281 292 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-219ENST00000539952 PHKA1P46020 1223 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 RHBDL3P58872 404 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 HERVK_113P62684 666 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 IRX6P78412 446 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-219ENST00000539952 MORN1Q5T089 497 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 CCDC102BQ68D86 513 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 B4GALNT3Q6L9W6 998 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 GPR142Q7Z601 462 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 CCDC84Q86UT8 332 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-219ENST00000539952 ARRDC4Q8NCT1 418 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 LPAR1Q92633 364 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 DCBLD2Q96PD2 775 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 CWC22Q9HCG8 908 aaKnown RBP7.33□□□□□ -1.24
CPSF7-219ENST00000539952 AKAP2Q9Y2D5 859 aa7.33□□□□□ -1.24
CPSF7-219ENST00000539952 MROH7-TTC4A0A0A0MT08 1334 aa7.32□□□□□ -1.24
CPSF7-219ENST00000539952 DNM1LO00429 736 aa7.32□□□□□ -1.24
CPSF7-219ENST00000539952 COL9A1P20849 921 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms