RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 OSBPP22059 807 aa20.34■□□□□ 0.85
DDB1-215ENST00000539712 SRRDQ9UH36 339 aa20.34■□□□□ 0.85
DDB1-215ENST00000539712 ZBTB21Q9ULJ3 1066 aa20.34■□□□□ 0.85
DDB1-215ENST00000539712 DDX60LQ5H9U9 1706 aaKnown RBP20.33■□□□□ 0.85
DDB1-215ENST00000539712 ADD2P35612 726 aa20.33■□□□□ 0.85
DDB1-215ENST00000539712 PRMT2P55345 433 aa20.33■□□□□ 0.85
DDB1-215ENST00000539712 RRP1P56182 461 aaKnown RBP20.33■□□□□ 0.85
DDB1-215ENST00000539712 BACE1P56817 501 aa20.33■□□□□ 0.85
DDB1-215ENST00000539712 SLC9C1Q4G0N8 1177 aa20.33■□□□□ 0.85
DDB1-215ENST00000539712 LCORLQ8N3X6 602 aa20.33■□□□□ 0.85
DDB1-215ENST00000539712 GINM1Q9NU53 330 aa20.33■□□□□ 0.85
DDB1-215ENST00000539712 SERPINB13Q9UIV8 391 aa20.33■□□□□ 0.85
DDB1-215ENST00000539712 FMNL1O95466 1100 aaPredicted RBP20.32■□□□□ 0.84
DDB1-215ENST00000539712 GABPAQ06546 454 aa20.32■□□□□ 0.84
DDB1-215ENST00000539712 MTMR2Q13614 643 aa20.32■□□□□ 0.84
DDB1-215ENST00000539712 SH3TC2Q8TF17 1288 aa20.32■□□□□ 0.84
DDB1-215ENST00000539712 AS3MTQ9HBK9 375 aa20.32■□□□□ 0.84
DDB1-215ENST00000539712 GH2P01242 217 aa20.31■□□□□ 0.84
DDB1-215ENST00000539712 SHMT1P34896 483 aa20.31■□□□□ 0.84
DDB1-215ENST00000539712 TTC6Q86TZ1 520 aa20.31■□□□□ 0.84
DDB1-215ENST00000539712 SDR42E1Q8WUS8 393 aa20.31■□□□□ 0.84
DDB1-215ENST00000539712 TRIM34Q9BYJ4 488 aa20.31■□□□□ 0.84
DDB1-215ENST00000539712 CRNKL1Q9BZJ0 848 aaKnown RBP20.31■□□□□ 0.84
DDB1-215ENST00000539712 ASCC2Q9H1I8 757 aaPredicted RBP20.31■□□□□ 0.84
DDB1-215ENST00000539712 ARMT1Q9H993 441 aa20.31■□□□□ 0.84
DDB1-215ENST00000539712 DCP1AQ9NPI6 582 aaPredicted RBP20.31■□□□□ 0.84
DDB1-215ENST00000539712 PRKAB2O43741 272 aa20.3■□□□□ 0.84
DDB1-215ENST00000539712 ANKRD13CQ8N6S4 541 aa20.3■□□□□ 0.84
DDB1-215ENST00000539712 SMCR8Q8TEV9 937 aaPredicted RBP20.3■□□□□ 0.84
DDB1-215ENST00000539712 EMILIN3Q9NT22 766 aa20.3■□□□□ 0.84
DDB1-215ENST00000539712 ECHDC1Q9NTX5 307 aa20.3■□□□□ 0.84
DDB1-215ENST00000539712 GABRQQ9UN88 632 aa20.3■□□□□ 0.84
DDB1-215ENST00000539712 RBBP6Q7Z6E9 1792 aaKnown RBP20.3■□□□□ 0.84
DDB1-215ENST00000539712 MGAMO43451 1857 aa20.29■□□□□ 0.84
DDB1-215ENST00000539712 C19orf81C9J6K1 198 aa20.29■□□□□ 0.84
DDB1-215ENST00000539712 EN2P19622 333 aaPredicted RBP20.29■□□□□ 0.84
DDB1-215ENST00000539712 HOXA7P31268 230 aaPredicted RBP20.29■□□□□ 0.84
DDB1-215ENST00000539712 FCGRTP55899 365 aa20.29■□□□□ 0.84
DDB1-215ENST00000539712 PRKCZQ05513 592 aa20.29■□□□□ 0.84
DDB1-215ENST00000539712 UBE3CQ15386 1083 aa20.29■□□□□ 0.84
DDB1-215ENST00000539712 NBPF11Q86T75 865 aa20.29■□□□□ 0.84
DDB1-215ENST00000539712 PNMA3Q9UL41 463 aa20.29■□□□□ 0.84
DDB1-215ENST00000539712 MYPNQ86TC9 1320 aa20.28■□□□□ 0.84
DDB1-215ENST00000539712 USP17L10C9JJH3 530 aa20.28■□□□□ 0.84
DDB1-215ENST00000539712 SMIM22K7EJ46 135 aa20.28■□□□□ 0.84
DDB1-215ENST00000539712 MBD4O95243 580 aa20.28■□□□□ 0.84
DDB1-215ENST00000539712 CYP2D6P10635 497 aa20.28■□□□□ 0.84
DDB1-215ENST00000539712 HOXD10P28358 340 aa20.28■□□□□ 0.84
DDB1-215ENST00000539712 GUCY1A2P33402 732 aa20.28■□□□□ 0.84
DDB1-215ENST00000539712 TSHZ3Q63HK5 1081 aa20.28■□□□□ 0.84
DDB1-215ENST00000539712 POTEEQ6S8J3 1075 aa20.28■□□□□ 0.84
DDB1-215ENST00000539712 MCM9Q9NXL9 1143 aa20.28■□□□□ 0.84
DDB1-215ENST00000539712 POLR3DP05423 398 aaPredicted RBP20.27■□□□□ 0.84
DDB1-215ENST00000539712 FAM110CQ1W6H9 321 aa20.27■□□□□ 0.84
DDB1-215ENST00000539712 CERKLQ49MI3 558 aaPredicted RBP20.27■□□□□ 0.84
DDB1-215ENST00000539712 CRBNQ96SW2 442 aa20.27■□□□□ 0.84
DDB1-215ENST00000539712 P2RX7Q99572 595 aaKnown RBP20.27■□□□□ 0.84
DDB1-215ENST00000539712 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.27■□□□□ 0.849e-7■■■■■ 28.4
DDB1-215ENST00000539712 DOCK3Q8IZD9 2030 aa20.27■□□□□ 0.84
DDB1-215ENST00000539712 NAV1Q8NEY1 1877 aa20.26■□□□□ 0.83
DDB1-215ENST00000539712 PEX10O60683 326 aa20.26■□□□□ 0.83
DDB1-215ENST00000539712 MYCP01106 439 aaPredicted RBP20.26■□□□□ 0.83
DDB1-215ENST00000539712 GCLCP48506 637 aaPredicted RBP20.26■□□□□ 0.83
DDB1-215ENST00000539712 PABPC4Q13310 644 aaKnown RBP eCLIP20.26■□□□□ 0.83
DDB1-215ENST00000539712 MTFR1Q15390 333 aa20.26■□□□□ 0.83
DDB1-215ENST00000539712 ABCB5Q2M3G0 1257 aa20.26■□□□□ 0.83
DDB1-215ENST00000539712 ACER1Q8TDN7 264 aa20.26■□□□□ 0.83
DDB1-215ENST00000539712 YTHDC1Q96MU7 727 aaKnown RBP20.26■□□□□ 0.83
DDB1-215ENST00000539712 PUS7LQ9H0K6 701 aaKnown RBP20.26■□□□□ 0.83
DDB1-215ENST00000539712 TMOD4Q9NZQ9 345 aa20.26■□□□□ 0.83
DDB1-215ENST00000539712 GRK4P32298 578 aa20.25■□□□□ 0.83
DDB1-215ENST00000539712 FLT3LGP49771 235 aa20.25■□□□□ 0.83
DDB1-215ENST00000539712 SLC44A5Q8NCS7 719 aa20.25■□□□□ 0.83
DDB1-215ENST00000539712 RAET1EQ8TD07 263 aa20.25■□□□□ 0.83
DDB1-215ENST00000539712 OTUD7AQ8TE49 926 aaPredicted RBP20.25■□□□□ 0.83
DDB1-215ENST00000539712 ATP8A2Q9NTI2 1148 aa20.25■□□□□ 0.83
DDB1-215ENST00000539712 MORF4L1Q9UBU8 362 aa20.25■□□□□ 0.83
DDB1-215ENST00000539712 MYH7P12883 1935 aa20.24■□□□□ 0.83
DDB1-215ENST00000539712 USP17L2Q6R6M4 530 aa20.24■□□□□ 0.83
DDB1-215ENST00000539712 KBTBD3Q8NAB2 608 aa20.24■□□□□ 0.83
DDB1-215ENST00000539712 DYNLL2Q96FJ2 89 aa20.24■□□□□ 0.83
DDB1-215ENST00000539712 C12orf42Q96LP6 360 aa20.24■□□□□ 0.83
DDB1-215ENST00000539712 TMEM106CQ9BVX2 250 aa20.24■□□□□ 0.83
DDB1-215ENST00000539712 TXNRD2Q9NNW7 524 aa20.24■□□□□ 0.83
DDB1-215ENST00000539712 CYP2D7A0A087X1C5 515 aa20.23■□□□□ 0.83
DDB1-215ENST00000539712 TNPO2O14787 897 aaKnown RBP20.23■□□□□ 0.83
DDB1-215ENST00000539712 HERVK_113P62684 666 aa20.23■□□□□ 0.83
DDB1-215ENST00000539712 RAB3GAP1Q15042 981 aa20.23■□□□□ 0.83
DDB1-215ENST00000539712 KIAA1683Q9H0B3 1180 aa20.23■□□□□ 0.83
DDB1-215ENST00000539712 RBPJLQ9UBG7 517 aa20.23■□□□□ 0.83
DDB1-215ENST00000539712 IRX3P78415 501 aaPredicted RBP20.22■□□□□ 0.83
DDB1-215ENST00000539712 IRF5Q13568 498 aa20.22■□□□□ 0.83
DDB1-215ENST00000539712 SEPT2Q15019 361 aa20.22■□□□□ 0.83
DDB1-215ENST00000539712 C12orf60Q5U649 245 aa20.22■□□□□ 0.83
DDB1-215ENST00000539712 ZSCAN25Q6NSZ9 544 aa20.22■□□□□ 0.83
DDB1-215ENST00000539712 SIAH1Q8IUQ4 282 aa20.22■□□□□ 0.83
DDB1-215ENST00000539712 PI4K2BQ8TCG2 481 aa20.22■□□□□ 0.83
DDB1-215ENST00000539712 STRBPQ96SI9 672 aaKnown RBP20.22■□□□□ 0.83
DDB1-215ENST00000539712 GJD2Q9UKL4 321 aa20.22■□□□□ 0.83
DDB1-215ENST00000539712 BAZ2AQ9UIF9 1905 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms