RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 AIDAQ96BJ3 306 aa23.17■■□□□ 1.3
TMEM260-203ENST00000539559 ARFGAP3Q9NP61 516 aa23.17■■□□□ 1.3
TMEM260-203ENST00000539559 RAD9BQ6WBX8 426 aa23.17■■□□□ 1.3
TMEM260-203ENST00000539559 UBXN6Q9BZV1 441 aa23.17■■□□□ 1.3
TMEM260-203ENST00000539559 PRKAB2O43741 272 aa23.16■■□□□ 1.3
TMEM260-203ENST00000539559 FUT8Q9BYC5 575 aa23.16■■□□□ 1.3
TMEM260-203ENST00000539559 LRP6O75581 1613 aa23.16■■□□□ 1.3
TMEM260-203ENST00000539559 MMP1P03956 469 aa23.16■■□□□ 1.3
TMEM260-203ENST00000539559 MORC3Q14149 939 aa23.16■■□□□ 1.3
TMEM260-203ENST00000539559 ARMT1Q9H993 441 aa23.16■■□□□ 1.3
TMEM260-203ENST00000539559 ITGB4P16144 1822 aa23.16■■□□□ 1.3
TMEM260-203ENST00000539559 MYH7P12883 1935 aa23.16■■□□□ 1.3
TMEM260-203ENST00000539559 H3BQF6 201 aa23.16■■□□□ 1.3
TMEM260-203ENST00000539559 ABL1P00519 1130 aa23.16■■□□□ 1.3
TMEM260-203ENST00000539559 TPM1P09493 284 aa23.16■■□□□ 1.3
TMEM260-203ENST00000539559 ENOX1Q8TC92 643 aaKnown RBP23.16■■□□□ 1.3
TMEM260-203ENST00000539559 TMEM87BQ96K49 555 aa23.16■■□□□ 1.3
TMEM260-203ENST00000539559 STRBPQ96SI9 672 aaKnown RBP23.16■■□□□ 1.3
TMEM260-203ENST00000539559 CSRNP2Q9H175 543 aa23.16■■□□□ 1.3
TMEM260-203ENST00000539559 hCG_1642624A0A1W2PR95 340 aa23.15■■□□□ 1.3
TMEM260-203ENST00000539559 PTPREP23469 700 aa23.15■■□□□ 1.3
TMEM260-203ENST00000539559 RBL2Q08999 1139 aa23.15■■□□□ 1.3
TMEM260-203ENST00000539559 HLFQ16534 295 aa23.15■■□□□ 1.3
TMEM260-203ENST00000539559 TTLL11Q8NHH1 800 aa23.15■■□□□ 1.3
TMEM260-203ENST00000539559 NUP133Q8WUM0 1156 aa23.15■■□□□ 1.3
TMEM260-203ENST00000539559 AKAP11Q9UKA4 1901 aa23.15■■□□□ 1.3
TMEM260-203ENST00000539559 FMNL1O95466 1100 aaPredicted RBP23.15■■□□□ 1.3
TMEM260-203ENST00000539559 SARSP49591 514 aaKnown RBP23.15■■□□□ 1.3
TMEM260-203ENST00000539559 NR1I3Q14994 352 aa23.15■■□□□ 1.3
TMEM260-203ENST00000539559 DDB1Q16531 1140 aa23.15■■□□□ 1.3
TMEM260-203ENST00000539559 ZFP91Q96JP5 570 aaPredicted RBP23.15■■□□□ 1.3
TMEM260-203ENST00000539559 CABP5Q9NP86 173 aa23.15■■□□□ 1.3
TMEM260-203ENST00000539559 A0A087X0B3 334 aa23.14■■□□□ 1.29
TMEM260-203ENST00000539559 MBD4O95243 580 aa23.14■■□□□ 1.29
TMEM260-203ENST00000539559 CD44P16070 742 aaKnown RBP23.14■■□□□ 1.29
TMEM260-203ENST00000539559 STAMQ92783 540 aa23.14■■□□□ 1.29
TMEM260-203ENST00000539559 GOLGA1Q92805 767 aa23.14■■□□□ 1.29
TMEM260-203ENST00000539559 NAPBQ9H115 298 aa23.14■■□□□ 1.29
TMEM260-203ENST00000539559 SUGCTQ9HAC7 445 aa23.14■■□□□ 1.29
TMEM260-203ENST00000539559 CSF1RP07333 972 aa23.14■■□□□ 1.29
TMEM260-203ENST00000539559 LONRF2Q1L5Z9 754 aa23.14■■□□□ 1.29
TMEM260-203ENST00000539559 KIF6Q6ZMV9 814 aa23.14■■□□□ 1.29
TMEM260-203ENST00000539559 IFNL3Q8IZI9 196 aa23.14■■□□□ 1.29
TMEM260-203ENST00000539559 MLKLQ8NB16 471 aa23.14■■□□□ 1.29
TMEM260-203ENST00000539559 EPSTI1Q96J88 318 aa23.14■■□□□ 1.29
TMEM260-203ENST00000539559 ACTN4O43707 911 aaKnown RBP23.13■■□□□ 1.29
TMEM260-203ENST00000539559 SAFBQ15424 915 aaKnown RBP eCLIP23.13■■□□□ 1.29
TMEM260-203ENST00000539559 WWC2Q6AWC2 1192 aa23.13■■□□□ 1.29
TMEM260-203ENST00000539559 SGMS1Q86VZ5 419 aa23.13■■□□□ 1.29
TMEM260-203ENST00000539559 MAGEB6Q8N7X4 407 aa23.13■■□□□ 1.29
TMEM260-203ENST00000539559 HOOK1Q9UJC3 728 aaKnown RBP23.13■■□□□ 1.29
TMEM260-203ENST00000539559 AKR1B15C9JRZ8 316 aaPredicted RBP23.13■■□□□ 1.29
TMEM260-203ENST00000539559 PCCAP05165 728 aaPredicted RBP23.13■■□□□ 1.29
TMEM260-203ENST00000539559 MCM6Q14566 821 aa23.13■■□□□ 1.29
TMEM260-203ENST00000539559 RABGGTAQ92696 567 aa23.13■■□□□ 1.29
TMEM260-203ENST00000539559 WNK3Q9BYP7 1800 aa23.12■■□□□ 1.29
TMEM260-203ENST00000539559 TCRBV5S4A2TA0A5A2 114 aa23.12■■□□□ 1.29
TMEM260-203ENST00000539559 GOLGA6L9A6NEM1 432 aa23.12■■□□□ 1.29
TMEM260-203ENST00000539559 SMIM22K7EJ46 135 aa23.12■■□□□ 1.29
TMEM260-203ENST00000539559 IGSF22Q8N9C0 903 aa23.12■■□□□ 1.29
TMEM260-203ENST00000539559 ZBTB38Q8NAP3 1195 aaPredicted RBP23.12■■□□□ 1.29
TMEM260-203ENST00000539559 CCDC175P0C221 793 aa23.12■■□□□ 1.29
TMEM260-203ENST00000539559 RAD51AP2Q09MP3 1159 aa23.12■■□□□ 1.29
TMEM260-203ENST00000539559 UBE3CQ15386 1083 aa23.12■■□□□ 1.29
TMEM260-203ENST00000539559 TXLNAP40222 546 aa23.11■■□□□ 1.29
TMEM260-203ENST00000539559 CHMP4BP1P59074 171 aa23.11■■□□□ 1.29
TMEM260-203ENST00000539559 RTN1Q16799 776 aa23.11■■□□□ 1.29
TMEM260-203ENST00000539559 CREBRFQ8IUR6 639 aa23.11■■□□□ 1.29
TMEM260-203ENST00000539559 TBC1D2BQ9UPU7 963 aa23.11■■□□□ 1.29
TMEM260-203ENST00000539559 ADGRG1Q9Y653 693 aa23.11■■□□□ 1.29
TMEM260-203ENST00000539559 NRAPQ86VF7 1730 aa23.11■■□□□ 1.29
TMEM260-203ENST00000539559 MYO1BO43795 1136 aa23.11■■□□□ 1.29
TMEM260-203ENST00000539559 IFNAR1P17181 557 aa23.11■■□□□ 1.29
TMEM260-203ENST00000539559 FAM193AP78312 1265 aa23.11■■□□□ 1.29
TMEM260-203ENST00000539559 ZNF569Q5MCW4 686 aa23.11■■□□□ 1.29
TMEM260-203ENST00000539559 NT5DC1Q5TFE4 455 aa23.11■■□□□ 1.29
TMEM260-203ENST00000539559 PNKPQ96T60 521 aa23.11■■□□□ 1.29
TMEM260-203ENST00000539559 WNT7AO00755 349 aa23.1■■□□□ 1.29
TMEM260-203ENST00000539559 PLCD1P51178 756 aa23.1■■□□□ 1.29
TMEM260-203ENST00000539559 EARS2Q5JPH6 523 aaKnown RBP23.1■■□□□ 1.29
TMEM260-203ENST00000539559 APTXQ7Z2E3 356 aaKnown RBP23.1■■□□□ 1.29
TMEM260-203ENST00000539559 SHISA4Q96DD7 197 aa23.1■■□□□ 1.29
TMEM260-203ENST00000539559 SPATA31A5Q5VU36 1347 aa23.1■■□□□ 1.29
TMEM260-203ENST00000539559 SPATA31A7Q8IWB4 1347 aa23.1■■□□□ 1.29
TMEM260-203ENST00000539559 A0A1B0GTH6 734 aa23.1■■□□□ 1.29
TMEM260-203ENST00000539559 LMAN1P49257 510 aa23.1■■□□□ 1.29
TMEM260-203ENST00000539559 ACRBPQ8NEB7 543 aa23.1■■□□□ 1.29
TMEM260-203ENST00000539559 SLC4A9Q96Q91 983 aa23.1■■□□□ 1.29
TMEM260-203ENST00000539559 CDC5LQ99459 802 aaKnown RBP23.1■■□□□ 1.29
TMEM260-203ENST00000539559 ANKZF1Q9H8Y5 726 aa23.1■■□□□ 1.29
TMEM260-203ENST00000539559 KAT6BQ8WYB5 2073 aa23.1■■□□□ 1.29
TMEM260-203ENST00000539559 TULP2O00295 520 aa23.09■■□□□ 1.29
TMEM260-203ENST00000539559 CYP19A1P11511 503 aaPredicted RBP23.09■■□□□ 1.29
TMEM260-203ENST00000539559 CCT6AP40227 531 aaKnown RBP23.09■■□□□ 1.29
TMEM260-203ENST00000539559 VGLL2Q8N8G2 317 aa23.09■■□□□ 1.29
TMEM260-203ENST00000539559 N4BP1O75113 896 aaKnown RBP23.09■■□□□ 1.29
TMEM260-203ENST00000539559 PRDM1O75626 825 aa23.09■■□□□ 1.29
TMEM260-203ENST00000539559 RHOXF2BP0C7M4 288 aa23.09■■□□□ 1.29
TMEM260-203ENST00000539559 CDC25AP30304 524 aa23.09■■□□□ 1.29
TMEM260-203ENST00000539559 CASP14P31944 242 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms