RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 ARHGAP25P42331 645 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 GJA8P48165 433 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 EVCP57679 992 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 GCKRQ14397 625 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 DBN1Q16643 649 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 TUBB8Q3ZCM7 444 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 IQCF2Q8IXL9 164 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 GALNT15Q8N3T1 639 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CCDC102AQ96A19 550 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 SPDL1Q96EA4 605 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 MYD88Q99836 296 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PARD6BQ9BYG5 372 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 UNC45AQ9H3U1 944 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 VCPKMTQ9H867 229 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 EBF2Q9HAK2 575 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 SLC39A2Q9NP94 309 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PA2G4Q9UQ80 394 aaKnown RBP6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PARP3Q9Y6F1 533 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ZEB2O60315 1214 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 E2F6O75461 281 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 YY1P25490 414 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 TXLNAP40222 546 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PUS10Q3MIT2 529 aaKnown RBP6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 TRIM65Q6PJ69 517 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 SMYD1Q8NB12 490 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PDE11AQ9HCR9 933 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 SPATA7Q9P0W8 599 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 GMEB1Q9Y692 573 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 KCPQ6ZWJ8 1503 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 UBR2Q8IWV8 1755 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PAPPAQ13219 1627 aa6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 USP42Q9H9J4 1324 aaKnown RBP6.52□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ANKRD65E5RJM6 399 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PAPOLAP51003 745 aaKnown RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 EVA1CP58658 441 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PSMC1P62191 440 aaKnown RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 POSTNQ15063 836 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CCDC38Q502W7 563 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ELOA2Q8IYF1 753 aaPredicted RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 DDX54Q8TDD1 881 aaKnown RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ACSBG1Q96GR2 724 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CHAMP1Q96JM3 812 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CBX8Q9HC52 389 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 TMEM221A6NGB7 291 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 SLC27A2O14975 620 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 MAP4K4O95819 1239 aaPredicted RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PENKP01210 267 aaPredicted RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ATP5JP18859 108 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ACTN3Q08043 901 aaPredicted RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 IFFO1Q0D2I5 559 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 RRP12Q5JTH9 1297 aaKnown RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CEP85LQ5SZL2 805 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 RC3H1Q5TC82 1133 aaKnown RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CAPRIN2Q6IMN6 1127 aaKnown RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 B4GALNT4Q76KP1 1039 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 FAM228AQ86W67 206 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 FCHSD1Q86WN1 690 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CLASRPQ8N2M8 674 aaKnown RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 MPHOSPH8Q99549 860 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 GORASP1Q9BQQ3 440 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 IL25Q9H293 177 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 FRMD4BQ9Y2L6 1034 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 THRAP3Q9Y2W1 955 aaKnown RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 SH3TC1Q8TE82 1336 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 TNS2Q63HR2 1409 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 NBPF26B4DH59 902 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ABLIM1O14639 778 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 INHBCP55103 352 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 KIF4BQ2VIQ3 1234 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 RBM26Q5T8P6 1007 aaKnown RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 NBPF14Q5TI25 921 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ARMC3Q5W041 872 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 MYOCDQ8IZQ8 938 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 TRIM58Q8NG06 486 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 RSRC1Q96IZ7 334 aaKnown RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 TSPYL2Q9H2G4 693 aaPredicted RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 DNAAF2Q9NVR5 837 aaKnown RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PHF24Q9UPV7 400 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CAPN7Q9Y6W3 813 aa6.51□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ARFGEF2Q9Y6D5 1785 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CCDC69A6NI79 296 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 SRRM3A6NNA2 597 aaPredicted RBP6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 MEFVO15553 781 aaPredicted RBP6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CDR1P51861 262 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 TYRO3Q06418 890 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CLPPQ16740 277 aaPredicted RBP6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 KBTBD12Q3ZCT8 623 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 EPHA10Q5JZY3 1008 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 MFSD4BQ5TF39 518 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 MICALCLQ6ZW33 695 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CCDC80Q76M96 950 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PLBD2Q8NHP8 589 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 AFAP1L1Q8TED9 768 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 SENP2Q9HC62 589 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ANO2Q9NQ90 1003 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 INCENPQ9NQS7 918 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 BTG4Q9NY30 223 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ATP8A1Q9Y2Q0 1164 aa6.5□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CDHR2Q9BYE9 1310 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms