RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 LGR6Q9HBX8 967 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 FAM86C1Q9NVL1 165 aa4.71□□□□□ -1.66
SNHG1-210ENST00000539303 RNGTTO60942 597 aaKnown RBP4.7□□□□□ -1.66
SNHG1-210ENST00000539303 DDAH1O94760 285 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 TCEAL1Q15170 157 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 NFE2L2Q16236 605 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 HP1BP3Q5SSJ5 553 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-210ENST00000539303 PRAMEF13Q5VWM6 474 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 CDCP2Q5VXM1 449 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 SDE2Q6IQ49 451 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 PPFIBP1Q86W92 1011 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 MCATQ8IVS2 390 aaKnown RBP4.7□□□□□ -1.66
SNHG1-210ENST00000539303 LILRB2Q8N423 598 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 C19orf47Q8N9M1 422 aaKnown RBP4.7□□□□□ -1.66
SNHG1-210ENST00000539303 KLHL6Q8WZ60 621 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 MKL1Q969V6 931 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 DNAJC7Q99615 494 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 KIF2CQ99661 725 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 SUGCTQ9HAC7 445 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 CYP4F12Q9HCS2 524 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 ADAM30Q9UKF2 790 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 TMA7Q9Y2S6 64 aaKnown RBP4.7□□□□□ -1.66
SNHG1-210ENST00000539303 TACC3Q9Y6A5 838 aa4.7□□□□□ -1.66
SNHG1-210ENST00000539303 TNFRSF10CO14798 259 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 FANCGO15287 622 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 PDPK1O15530 556 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 DIAPH1O60610 1272 aaKnown RBP4.69□□□□□ -1.66
SNHG1-210ENST00000539303 UBOX5O94941 541 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 RAG1P15918 1043 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 RAB6AP20340 208 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 ASPAP45381 313 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 FXNQ16595 210 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 LRRFIP1Q32MZ4 808 aaKnown RBP4.69□□□□□ -1.66
SNHG1-210ENST00000539303 TDRD10Q5VZ19 366 aaKnown RBP4.69□□□□□ -1.66
SNHG1-210ENST00000539303 CDPF1Q6NVV7 123 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 FDX2Q6P4F2 183 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 SPATC1Q76KD6 591 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 HID1Q8IV36 788 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 MRPL41Q8IXM3 137 aaKnown RBP4.69□□□□□ -1.66
SNHG1-210ENST00000539303 FAM178BQ8IXR5 827 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 TMEM192Q8IY95 271 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 PHACTR4Q8IZ21 702 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 BAHD1Q8TBE0 780 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-210ENST00000539303 RNPC3Q96LT9 517 aaKnown RBP4.69□□□□□ -1.66
SNHG1-210ENST00000539303 UBL7Q96S82 380 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-210ENST00000539303 ATXN3LQ9H3M9 355 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 GSX1Q9H4S2 264 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-210ENST00000539303 PFDN2Q9UHV9 154 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 USP21Q9UK80 565 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 ADAMTS8Q9UP79 889 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 SYNGAP1Q96PV0 1343 aa4.69□□□□□ -1.66
SNHG1-210ENST00000539303 C9IYK1 514 aa4.68□□□□□ -1.66
SNHG1-210ENST00000539303 DYNC1LI2O43237 492 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-210ENST00000539303 GLB1P16278 677 aa4.68□□□□□ -1.66
SNHG1-210ENST00000539303 NOS3P29474 1203 aa4.68□□□□□ -1.66
SNHG1-210ENST00000539303 IREB2P48200 963 aaKnown RBP4.68□□□□□ -1.66
SNHG1-210ENST00000539303 INSM1Q01101 510 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-210ENST00000539303 MLECQ14165 292 aa4.68□□□□□ -1.66
SNHG1-210ENST00000539303 SGO2Q562F6 1265 aa4.68□□□□□ -1.66
SNHG1-210ENST00000539303 PRRT3Q5FWE3 981 aa4.68□□□□□ -1.66
SNHG1-210ENST00000539303 VHLLQ6RSH7 139 aa4.68□□□□□ -1.66
SNHG1-210ENST00000539303 SLFN12Q8IYM2 578 aa4.68□□□□□ -1.66
SNHG1-210ENST00000539303 TAB3Q8N5C8 712 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-210ENST00000539303 ZNF507Q8TCN5 953 aa4.68□□□□□ -1.66
SNHG1-210ENST00000539303 ZNF512BQ96KM6 892 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-210ENST00000539303 SLC6A18Q96N87 628 aa4.68□□□□□ -1.66
SNHG1-210ENST00000539303 AKTIPQ9H8T0 292 aa4.68□□□□□ -1.66
SNHG1-210ENST00000539303 PIDD1Q9HB75 910 aa4.68□□□□□ -1.66
SNHG1-210ENST00000539303 SPDYE3A6NKU9 549 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 TP53P04637 393 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-210ENST00000539303 HNRNPUQ00839 825 aaKnown RBP eCLIP4.67□□□□□ -1.66
SNHG1-210ENST00000539303 RASGRF1Q13972 1273 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 EGFLAMQ63HQ2 1017 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 ANKRD34AQ69YU3 496 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 KIAA1211LQ6NV74 962 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 CDC37L1Q7L3B6 337 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 ARMCX6Q7L4S7 300 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 SMYD4Q8IYR2 804 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-210ENST00000539303 TMEM130Q8N3G9 435 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 RIN3Q8TB24 985 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 DCAF11Q8TEB1 546 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 SH3TC2Q8TF17 1288 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 PPP1R13LQ8WUF5 828 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 FBLIM1Q8WUP2 373 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 MEGF10Q96KG7 1140 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 LGR4Q9BXB1 951 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 CCDC113Q9H0I3 377 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 ACSS3Q9H6R3 686 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 SSU72Q9NP77 194 aaKnown RBP4.67□□□□□ -1.66
SNHG1-210ENST00000539303 LEMD3Q9Y2U8 911 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 DAGLAQ9Y4D2 1042 aa4.67□□□□□ -1.66
SNHG1-210ENST00000539303 CST3P01034 146 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-210ENST00000539303 NFICP08651 508 aa4.66□□□□□ -1.66
SNHG1-210ENST00000539303 SPATA31C1P0DKV0 1188 aa4.66□□□□□ -1.66
SNHG1-210ENST00000539303 YARSP54577 528 aaKnown RBP4.66□□□□□ -1.66
SNHG1-210ENST00000539303 SQSTM1Q13501 440 aa4.66□□□□□ -1.66
SNHG1-210ENST00000539303 GNPTABQ3T906 1256 aa4.66□□□□□ -1.66
SNHG1-210ENST00000539303 MTERF2Q49AM1 385 aa4.66□□□□□ -1.66
SNHG1-210ENST00000539303 INTS3Q68E01 1043 aaKnown RBP4.66□□□□□ -1.66
SNHG1-210ENST00000539303 SLC6A19Q695T7 634 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms