RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 MB21D2Q8IYB1 491 aaPredicted RBP27.78■■■□□ 2.04
TMEM260-202ENST00000538838 PHF20L1A8MW92 1017 aa27.78■■■□□ 2.04
TMEM260-202ENST00000538838 GDF11O95390 407 aa27.78■■■□□ 2.04
TMEM260-202ENST00000538838 CPA1P15085 419 aa27.78■■■□□ 2.04
TMEM260-202ENST00000538838 CASTP20810 708 aaKnown RBP27.78■■■□□ 2.04
TMEM260-202ENST00000538838 CERKLQ49MI3 558 aaPredicted RBP27.78■■■□□ 2.04
TMEM260-202ENST00000538838 ZNF444Q8N0Y2 327 aaPredicted RBP27.78■■■□□ 2.04
TMEM260-202ENST00000538838 SMC1BQ8NDV3 1235 aa27.78■■■□□ 2.04
TMEM260-202ENST00000538838 ESR2Q92731 530 aa27.78■■■□□ 2.04
TMEM260-202ENST00000538838 AKR1B1P15121 316 aa27.77■■■□□ 2.04
TMEM260-202ENST00000538838 CYB5R4Q7L1T6 521 aa27.77■■■□□ 2.04
TMEM260-202ENST00000538838 TSPY2A6NKD2 308 aa27.76■■■□□ 2.03
TMEM260-202ENST00000538838 TOMM70O94826 608 aa27.76■■■□□ 2.03
TMEM260-202ENST00000538838 RBM46Q8TBY0 533 aaKnown RBP27.76■■■□□ 2.03
TMEM260-202ENST00000538838 UPF3BQ9BZI7 483 aaKnown RBP27.76■■■□□ 2.03
TMEM260-202ENST00000538838 USP2O75604 605 aaPredicted RBP27.75■■■□□ 2.03
TMEM260-202ENST00000538838 PSMA5P28066 241 aa27.75■■■□□ 2.03
TMEM260-202ENST00000538838 TFAP4Q01664 338 aa27.75■■■□□ 2.03
TMEM260-202ENST00000538838 BLOC1S2Q6QNY1 142 aa27.75■■■□□ 2.03
TMEM260-202ENST00000538838 WRNIP1Q96S55 665 aa27.75■■■□□ 2.03
TMEM260-202ENST00000538838 ZSWIM5Q9P217 1185 aa27.75■■■□□ 2.03
TMEM260-202ENST00000538838 MPHOSPH10O00566 681 aaKnown RBP27.74■■■□□ 2.03
TMEM260-202ENST00000538838 PPP1R12BO60237 982 aaPredicted RBP27.74■■■□□ 2.03
TMEM260-202ENST00000538838 TSPY3P0CV98 308 aa27.74■■■□□ 2.03
TMEM260-202ENST00000538838 TSPY8P0CW00 308 aa27.74■■■□□ 2.03
TMEM260-202ENST00000538838 INPP5BP32019 993 aa27.74■■■□□ 2.03
TMEM260-202ENST00000538838 JAG1P78504 1218 aa27.74■■■□□ 2.03
TMEM260-202ENST00000538838 MOB2Q70IA6 237 aa27.74■■■□□ 2.03
TMEM260-202ENST00000538838 CHST3Q7LGC8 479 aa27.74■■■□□ 2.03
TMEM260-202ENST00000538838 KLRG1Q96E93 195 aa27.74■■■□□ 2.03
TMEM260-202ENST00000538838 TM6SF1Q9BZW5 370 aa27.74■■■□□ 2.03
TMEM260-202ENST00000538838 ZNF112Q9UJU3 913 aa27.74■■■□□ 2.03
TMEM260-202ENST00000538838 ANGEL1Q9UNK9 670 aaKnown RBP27.74■■■□□ 2.03
TMEM260-202ENST00000538838 CELF2O95319 508 aaKnown RBP27.74■■■□□ 2.03
TMEM260-202ENST00000538838 ANTXR2P58335 489 aa27.74■■■□□ 2.03
TMEM260-202ENST00000538838 TTLL12Q14166 644 aaPredicted RBP27.74■■■□□ 2.03
TMEM260-202ENST00000538838 TCEANC2Q96MN5 208 aa27.74■■■□□ 2.03
TMEM260-202ENST00000538838 ZSWIM6Q9HCJ5 1215 aa27.74■■■□□ 2.03
TMEM260-202ENST00000538838 PLIN4Q96Q06 1357 aa27.73■■■□□ 2.03
TMEM260-202ENST00000538838 CAP2P40123 477 aa27.73■■■□□ 2.03
TMEM260-202ENST00000538838 ABCB5Q2M3G0 1257 aa27.73■■■□□ 2.03
TMEM260-202ENST00000538838 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.73■■■□□ 2.03
TMEM260-202ENST00000538838 CCDC17Q96LX7 622 aa27.73■■■□□ 2.03
TMEM260-202ENST00000538838 ZKSCAN3Q9BRR0 538 aa27.73■■■□□ 2.03
TMEM260-202ENST00000538838 PASKQ96RG2 1323 aa27.72■■■□□ 2.03
TMEM260-202ENST00000538838 GH2P01242 217 aa27.72■■■□□ 2.03
TMEM260-202ENST00000538838 HMGB1P09429 215 aaKnown RBP27.72■■■□□ 2.03
TMEM260-202ENST00000538838 RPS6KB1P23443 525 aa27.72■■■□□ 2.03
TMEM260-202ENST00000538838 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.72■■■□□ 2.03
TMEM260-202ENST00000538838 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.72■■■□□ 2.03
TMEM260-202ENST00000538838 MYH4Q9Y623 1939 aa27.72■■■□□ 2.03
TMEM260-202ENST00000538838 PRC1O43663 620 aa27.71■■■□□ 2.03
TMEM260-202ENST00000538838 NMT2O60551 498 aa27.71■■■□□ 2.03
TMEM260-202ENST00000538838 MCM5P33992 734 aa27.71■■■□□ 2.03
TMEM260-202ENST00000538838 RUFY3Q7L099 469 aa27.71■■■□□ 2.03
TMEM260-202ENST00000538838 DHX32Q7L7V1 743 aaKnown RBP27.71■■■□□ 2.03
TMEM260-202ENST00000538838 NEDD1Q8NHV4 660 aa27.71■■■□□ 2.03
TMEM260-202ENST00000538838 ZKSCAN4Q969J2 545 aaPredicted RBP27.71■■■□□ 2.03
TMEM260-202ENST00000538838 ZBTB21Q9ULJ3 1066 aa27.71■■■□□ 2.03
TMEM260-202ENST00000538838 CYP46A1Q9Y6A2 500 aa27.71■■■□□ 2.03
TMEM260-202ENST00000538838 IREB2P48200 963 aaKnown RBP27.7■■■□□ 2.03
TMEM260-202ENST00000538838 NT5C2P49902 561 aa27.7■■■□□ 2.03
TMEM260-202ENST00000538838 CLEC10AQ8IUN9 316 aa27.7■■■□□ 2.03
TMEM260-202ENST00000538838 LRRC2Q9BYS8 371 aa27.7■■■□□ 2.03
TMEM260-202ENST00000538838 PHIPQ8WWQ0 1821 aa27.7■■■□□ 2.03
TMEM260-202ENST00000538838 CTNND1O60716 968 aaKnown RBP27.7■■■□□ 2.02
TMEM260-202ENST00000538838 GUCY1A2P33402 732 aa27.7■■■□□ 2.02
TMEM260-202ENST00000538838 GBA2Q9HCG7 927 aaPredicted RBP27.7■■■□□ 2.02
TMEM260-202ENST00000538838 EXOSC10Q01780 885 aaKnown RBP27.69■■■□□ 2.02
TMEM260-202ENST00000538838 MAP3K11Q16584 847 aa27.69■■■□□ 2.02
TMEM260-202ENST00000538838 CST9Q5W186 159 aa27.69■■■□□ 2.02
TMEM260-202ENST00000538838 TMEM179Q6ZVK1 233 aa27.69■■■□□ 2.02
TMEM260-202ENST00000538838 ARMC9Q7Z3E5 817 aa27.69■■■□□ 2.02
TMEM260-202ENST00000538838 CABP5Q9NP86 173 aa27.69■■■□□ 2.02
TMEM260-202ENST00000538838 IL17RBQ9NRM6 502 aa27.69■■■□□ 2.02
TMEM260-202ENST00000538838 SEPT2Q15019 361 aa27.68■■■□□ 2.02
TMEM260-202ENST00000538838 RABEP1Q15276 862 aa27.68■■■□□ 2.02
TMEM260-202ENST00000538838 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.68■■■□□ 2.02
TMEM260-202ENST00000538838 IQCA1Q86XH1 822 aa27.68■■■□□ 2.02
TMEM260-202ENST00000538838 SCYL3Q8IZE3 742 aa27.68■■■□□ 2.02
TMEM260-202ENST00000538838 UBAC1Q9BSL1 405 aa27.68■■■□□ 2.02
TMEM260-202ENST00000538838 TNKSO95271 1327 aa27.68■■■□□ 2.02
TMEM260-202ENST00000538838 IGKV6D-41A0A0C4DH26 115 aa27.67■■■□□ 2.02
TMEM260-202ENST00000538838 MAP3K9P80192 1104 aa27.67■■■□□ 2.02
TMEM260-202ENST00000538838 VGLL4Q14135 290 aa27.67■■■□□ 2.02
TMEM260-202ENST00000538838 RAB3GAP1Q15042 981 aa27.67■■■□□ 2.02
TMEM260-202ENST00000538838 CEP95Q96GE4 821 aa27.67■■■□□ 2.02
TMEM260-202ENST00000538838 ZSCAN10Q96SZ4 725 aaPredicted RBP27.67■■■□□ 2.02
TMEM260-202ENST00000538838 GPHNQ9NQX3 736 aaPredicted RBP27.67■■■□□ 2.02
TMEM260-202ENST00000538838 WDR19Q8NEZ3 1342 aa27.67■■■□□ 2.02
TMEM260-202ENST00000538838 UBE2Q2LH0YL09 131 aa27.67■■■□□ 2.02
TMEM260-202ENST00000538838 NEK4P51957 841 aa27.67■■■□□ 2.02
TMEM260-202ENST00000538838 FSTL1Q12841 308 aa27.67■■■□□ 2.02
TMEM260-202ENST00000538838 NOL9Q5SY16 702 aaKnown RBP27.67■■■□□ 2.02
TMEM260-202ENST00000538838 CCDC84Q86UT8 332 aaPredicted RBP27.67■■■□□ 2.02
TMEM260-202ENST00000538838 ASNSP08243 561 aa27.66■■■□□ 2.02
TMEM260-202ENST00000538838 C2orf69Q8N8R5 385 aa27.66■■■□□ 2.02
TMEM260-202ENST00000538838 PDRG1Q9NUG6 133 aa27.66■■■□□ 2.02
TMEM260-202ENST00000538838 TCP11L1Q9NUJ3 509 aa27.66■■■□□ 2.02
TMEM260-202ENST00000538838 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms