RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 GGA3Q9NZ52 723 aa16.68■□□□□ 0.26
CD4-208ENST00000538827 SCAF8Q9UPN6 1271 aaKnown RBP16.68■□□□□ 0.26
CD4-208ENST00000538827 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.68■□□□□ 0.26
CD4-208ENST00000538827 DDTLA6NHG4 134 aaPredicted RBP16.67■□□□□ 0.26
CD4-208ENST00000538827 TNFAIP1Q13829 316 aa16.67■□□□□ 0.26
CD4-208ENST00000538827 ANGEL2Q5VTE6 544 aaKnown RBP16.67■□□□□ 0.26
CD4-208ENST00000538827 MAP1SQ66K74 1059 aaPredicted RBP16.67■□□□□ 0.26
CD4-208ENST00000538827 C16orf86Q6ZW13 317 aa16.67■□□□□ 0.26
CD4-208ENST00000538827 APOBEC3FQ8IUX4 373 aaKnown RBP16.67■□□□□ 0.26
CD4-208ENST00000538827 FAM151AQ8WW52 585 aa16.67■□□□□ 0.26
CD4-208ENST00000538827 SNX21Q969T3 373 aa16.67■□□□□ 0.26
CD4-208ENST00000538827 TTC14Q96N46 770 aa16.67■□□□□ 0.26
CD4-208ENST00000538827 CSRNP1Q96S65 589 aa16.67■□□□□ 0.26
CD4-208ENST00000538827 LARP6Q9BRS8 491 aaKnown RBP16.67■□□□□ 0.26
CD4-208ENST00000538827 TBC1D2Q9BYX2 928 aa16.67■□□□□ 0.26
CD4-208ENST00000538827 DHX36Q9H2U1 1008 aaKnown RBP16.67■□□□□ 0.26
CD4-208ENST00000538827 ZNF287Q9HBT7 754 aa16.67■□□□□ 0.26
CD4-208ENST00000538827 ATRNL1Q5VV63 1379 aa16.66■□□□□ 0.26
CD4-208ENST00000538827 TSPY2A6NKD2 308 aa16.66■□□□□ 0.26
CD4-208ENST00000538827 FAM196BA6NMK8 535 aa16.66■□□□□ 0.26
CD4-208ENST00000538827 ORC4O43929 436 aa16.66■□□□□ 0.26
CD4-208ENST00000538827 CDK8P49336 464 aa16.66■□□□□ 0.26
CD4-208ENST00000538827 ANTXR2P58335 489 aa16.66■□□□□ 0.26
CD4-208ENST00000538827 FKBP1CQ5VVH2 108 aa16.66■□□□□ 0.26
CD4-208ENST00000538827 PAXIP1Q6ZW49 1069 aaPredicted RBP16.66■□□□□ 0.26
CD4-208ENST00000538827 SH3BP5LQ7L8J4 393 aa16.66■□□□□ 0.26
CD4-208ENST00000538827 NKX2-3Q8TAU0 364 aa16.66■□□□□ 0.26
CD4-208ENST00000538827 ZKSCAN3Q9BRR0 538 aa16.66■□□□□ 0.26
CD4-208ENST00000538827 TMEM39BQ9GZU3 492 aa16.66■□□□□ 0.26
CD4-208ENST00000538827 SERPINB13Q9UIV8 391 aa16.66■□□□□ 0.26
CD4-208ENST00000538827 NAP1L2Q9ULW6 460 aaPredicted RBP16.66■□□□□ 0.26
CD4-208ENST00000538827 THSD7BQ9C0I4 1608 aa16.66■□□□□ 0.26
CD4-208ENST00000538827 K7ELQ4 463 aaPredicted RBP16.65■□□□□ 0.26
CD4-208ENST00000538827 MCM2P49736 904 aa16.65■□□□□ 0.26
CD4-208ENST00000538827 FAM47AQ5JRC9 791 aa16.65■□□□□ 0.26
CD4-208ENST00000538827 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
CD4-208ENST00000538827 ZNF444Q8N0Y2 327 aaPredicted RBP16.65■□□□□ 0.26
CD4-208ENST00000538827 BRF1Q92994 677 aa16.65■□□□□ 0.26
CD4-208ENST00000538827 IPO9Q96P70 1041 aaKnown RBP16.65■□□□□ 0.26
CD4-208ENST00000538827 UBAC1Q9BSL1 405 aa16.65■□□□□ 0.26
CD4-208ENST00000538827 POLR2AP24928 1970 aaKnown RBP16.65■□□□□ 0.26
CD4-208ENST00000538827 WDR19Q8NEZ3 1342 aa16.65■□□□□ 0.26
CD4-208ENST00000538827 ERICH2A1L162 156 aa16.64■□□□□ 0.25
CD4-208ENST00000538827 IFIT3O14879 490 aaKnown RBP16.64■□□□□ 0.25
CD4-208ENST00000538827 SLC4A3P48751 1232 aa16.64■□□□□ 0.25
CD4-208ENST00000538827 EXOSC10Q01780 885 aaKnown RBP16.64■□□□□ 0.25
CD4-208ENST00000538827 TOB2Q14106 344 aaPredicted RBP16.64■□□□□ 0.25
CD4-208ENST00000538827 RASA3Q14644 834 aa16.64■□□□□ 0.25
CD4-208ENST00000538827 SART3Q15020 963 aaKnown RBP16.64■□□□□ 0.25
CD4-208ENST00000538827 ANKRD1Q15327 319 aa16.64■□□□□ 0.25
CD4-208ENST00000538827 TMEM67Q5HYA8 995 aa16.64■□□□□ 0.25
CD4-208ENST00000538827 PRPF38BQ5VTL8 546 aaKnown RBP16.64■□□□□ 0.25
CD4-208ENST00000538827 EHD4Q9H223 541 aa16.64■□□□□ 0.25
CD4-208ENST00000538827 PI4KBQ9UBF8 816 aa16.64■□□□□ 0.25
CD4-208ENST00000538827 SWAP70Q9UH65 585 aa16.64■□□□□ 0.25
CD4-208ENST00000538827 ATAD5Q96QE3 1844 aa16.63■□□□□ 0.25
CD4-208ENST00000538827 SH2B2O14492 632 aaPredicted RBP16.63■□□□□ 0.25
CD4-208ENST00000538827 TSPY3P0CV98 308 aa16.63■□□□□ 0.25
CD4-208ENST00000538827 TSPY8P0CW00 308 aa16.63■□□□□ 0.25
CD4-208ENST00000538827 SLURP2P0DP57 97 aa16.63■□□□□ 0.25
CD4-208ENST00000538827 RASA1P20936 1047 aa16.63■□□□□ 0.25
CD4-208ENST00000538827 HIRAP54198 1017 aaPredicted RBP16.63■□□□□ 0.25
CD4-208ENST00000538827 TFAP4Q01664 338 aa16.63■□□□□ 0.25
CD4-208ENST00000538827 DGKZQ13574 1117 aa16.63■□□□□ 0.25
CD4-208ENST00000538827 CYP4F22Q6NT55 531 aa16.63■□□□□ 0.25
CD4-208ENST00000538827 NFXL1Q6ZNB6 911 aa16.63■□□□□ 0.25
CD4-208ENST00000538827 CDAN1Q8IWY9 1227 aa16.63■□□□□ 0.25
CD4-208ENST00000538827 IL27Q8NEV9 243 aa16.63■□□□□ 0.25
CD4-208ENST00000538827 GPHNQ9NQX3 736 aaPredicted RBP16.63■□□□□ 0.25
CD4-208ENST00000538827 ZSWIM5Q9P217 1185 aa16.63■□□□□ 0.25
CD4-208ENST00000538827 TNKSO95271 1327 aa16.63■□□□□ 0.25
CD4-208ENST00000538827 HSP90AA1P07900 732 aaKnown RBP16.62■□□□□ 0.25
CD4-208ENST00000538827 FGRP09769 529 aa16.62■□□□□ 0.25
CD4-208ENST00000538827 GABPAQ06546 454 aa16.62■□□□□ 0.25
CD4-208ENST00000538827 APOBRQ0VD83 1088 aa16.62■□□□□ 0.25
CD4-208ENST00000538827 WTAPQ15007 396 aa16.62■□□□□ 0.25
CD4-208ENST00000538827 IQCA1Q86XH1 822 aa16.62■□□□□ 0.25
CD4-208ENST00000538827 TMEM87BQ96K49 555 aa16.62■□□□□ 0.25
CD4-208ENST00000538827 DNAJC18Q9H819 358 aa16.62■□□□□ 0.25
CD4-208ENST00000538827 LIMCH1Q9UPQ0 1083 aa16.62■□□□□ 0.25
CD4-208ENST00000538827 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
CD4-208ENST00000538827 MPHOSPH10O00566 681 aaKnown RBP16.61■□□□□ 0.25
CD4-208ENST00000538827 LARGE1O95461 756 aa16.61■□□□□ 0.25
CD4-208ENST00000538827 SHMT1P34896 483 aa16.61■□□□□ 0.25
CD4-208ENST00000538827 STK3Q13188 491 aa16.61■□□□□ 0.25
CD4-208ENST00000538827 USP50Q70EL3 339 aaPredicted RBP16.61■□□□□ 0.25
CD4-208ENST00000538827 SPRYD3Q8NCJ5 442 aa16.61■□□□□ 0.25
CD4-208ENST00000538827 DCPSQ96C86 337 aaKnown RBP16.61■□□□□ 0.25
CD4-208ENST00000538827 ALDH8A1Q9H2A2 487 aaPredicted RBP16.61■□□□□ 0.25
CD4-208ENST00000538827 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.61■□□□□ 0.25
CD4-208ENST00000538827 TSKSQ9UJT2 592 aa16.61■□□□□ 0.25
CD4-208ENST00000538827 ANGEL1Q9UNK9 670 aaKnown RBP16.61■□□□□ 0.25
CD4-208ENST00000538827 TLL2Q9Y6L7 1015 aa16.61■□□□□ 0.25
CD4-208ENST00000538827 MYH4Q9Y623 1939 aa16.6■□□□□ 0.25
CD4-208ENST00000538827 KLF18A0A0U1RQI7 1052 aa16.6■□□□□ 0.25
CD4-208ENST00000538827 CCDC69A6NI79 296 aa16.6■□□□□ 0.25
CD4-208ENST00000538827 NMT2O60551 498 aa16.6■□□□□ 0.25
CD4-208ENST00000538827 AKR1B1P15121 316 aa16.6■□□□□ 0.25
CD4-208ENST00000538827 GRM1Q13255 1194 aa16.6■□□□□ 0.25
CD4-208ENST00000538827 RAB11FIP4Q86YS3 637 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms