RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 GSTO1P78417 241 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 CPVLQ9H3G5 476 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 DDX4Q9NQI0 724 aaKnown RBP16.41■□□□□ 0.22
ACTN1-205ENST00000538545 VPS54Q9P1Q0 977 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 FLT1P17948 1338 aa16.4■□□□□ 0.22
ACTN1-205ENST00000538545 CDKL5O76039 1030 aa16.4■□□□□ 0.22
ACTN1-205ENST00000538545 PDE4BQ07343 736 aa16.4■□□□□ 0.22
ACTN1-205ENST00000538545 GNL2Q13823 731 aaKnown RBP16.4■□□□□ 0.22
ACTN1-205ENST00000538545 PCDHA7Q9UN72 937 aa16.4■□□□□ 0.22
ACTN1-205ENST00000538545 V9GY48 417 aaPredicted RBP16.4■□□□□ 0.22
ACTN1-205ENST00000538545 SCN9AQ15858 1988 aa16.4■□□□□ 0.22
ACTN1-205ENST00000538545 MYH6P13533 1939 aa16.4■□□□□ 0.22
ACTN1-205ENST00000538545 LAMB1P07942 1786 aa16.4■□□□□ 0.22
ACTN1-205ENST00000538545 FAM205CA6NFA0 338 aa16.4■□□□□ 0.22
ACTN1-205ENST00000538545 C21orf2O43822 256 aa16.4■□□□□ 0.22
ACTN1-205ENST00000538545 PPP4CP60510 307 aa16.4■□□□□ 0.22
ACTN1-205ENST00000538545 AOC3Q16853 763 aa16.4■□□□□ 0.22
ACTN1-205ENST00000538545 SBK1Q52WX2 424 aa16.4■□□□□ 0.22
ACTN1-205ENST00000538545 CLEC10AQ8IUN9 316 aa16.4■□□□□ 0.22
ACTN1-205ENST00000538545 CCAR1Q8IX12 1150 aaKnown RBP16.4■□□□□ 0.22
ACTN1-205ENST00000538545 COA1Q9GZY4 146 aa16.4■□□□□ 0.22
ACTN1-205ENST00000538545 RCOR1Q9UKL0 485 aa16.4■□□□□ 0.22
ACTN1-205ENST00000538545 A0A1B0GVL5 298 aa16.39■□□□□ 0.21
ACTN1-205ENST00000538545 ADAMTS3O15072 1205 aa16.39■□□□□ 0.21
ACTN1-205ENST00000538545 LDHCP07864 332 aa16.39■□□□□ 0.21
ACTN1-205ENST00000538545 NOM1Q5C9Z4 860 aaKnown RBP16.39■□□□□ 0.21
ACTN1-205ENST00000538545 CATIPQ7Z7H3 387 aa16.39■□□□□ 0.21
ACTN1-205ENST00000538545 STX8Q9UNK0 236 aa16.39■□□□□ 0.21
ACTN1-205ENST00000538545 STAG2Q8N3U4 1231 aa16.39■□□□□ 0.21
ACTN1-205ENST00000538545 ORC4O43929 436 aa16.38■□□□□ 0.21
ACTN1-205ENST00000538545 STK38Q15208 465 aa16.38■□□□□ 0.21
ACTN1-205ENST00000538545 SRBD1Q8N5C6 995 aaKnown RBP16.38■□□□□ 0.21
ACTN1-205ENST00000538545 LINC00301Q8NCQ3 95 aa16.38■□□□□ 0.21
ACTN1-205ENST00000538545 NUP62CLQ9H1M0 184 aa16.38■□□□□ 0.21
ACTN1-205ENST00000538545 SF3A1Q15459 793 aaKnown RBP16.38■□□□□ 0.21
ACTN1-205ENST00000538545 TMTC2Q8N394 836 aa16.38■□□□□ 0.21
ACTN1-205ENST00000538545 ZNF396Q96N95 335 aaPredicted RBP16.38■□□□□ 0.21
ACTN1-205ENST00000538545 TMX4Q9H1E5 349 aaPredicted RBP16.38■□□□□ 0.21
ACTN1-205ENST00000538545 ISY1Q9ULR0 285 aaKnown RBP16.38■□□□□ 0.21
ACTN1-205ENST00000538545 MRVI1Q9Y6F6 885 aa16.38■□□□□ 0.21
ACTN1-205ENST00000538545 FAM205AQ6ZU69 1335 aa16.38■□□□□ 0.21
ACTN1-205ENST00000538545 NAV1Q8NEY1 1877 aa16.38■□□□□ 0.21
ACTN1-205ENST00000538545 GOLGA8HP0CJ92 632 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 TSPY3P0CV98 308 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 TSPY8P0CW00 308 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 NFIAQ12857 509 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 PKN1Q16512 942 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 ZFPM1Q8IX07 1006 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 DIS3L2Q8IYB7 885 aaKnown RBP16.37■□□□□ 0.21
ACTN1-205ENST00000538545 TRIM22Q8IYM9 498 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 FAM196BA6NMK8 535 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 SLC3A2P08195 630 aaKnown RBP16.37■□□□□ 0.21
ACTN1-205ENST00000538545 RASA1P20936 1047 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 EIF6P56537 245 aaKnown RBP16.37■□□□□ 0.21
ACTN1-205ENST00000538545 FUT2Q10981 343 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 TRIM29Q14134 588 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 EARS2Q5JPH6 523 aaKnown RBP16.37■□□□□ 0.21
ACTN1-205ENST00000538545 TNMDQ9H2S6 317 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 MYH1P12882 1939 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 WDHD1O75717 1129 aaPredicted RBP16.37■□□□□ 0.21
ACTN1-205ENST00000538545 SPECC1Q5M775 1068 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 FSIP1Q8NA03 581 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 TBC1D22AQ8WUA7 517 aa16.37■□□□□ 0.21
ACTN1-205ENST00000538545 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.37■□□□□ 0.21
ACTN1-205ENST00000538545 CDK8P49336 464 aa16.36■□□□□ 0.21
ACTN1-205ENST00000538545 TCP10Q12799 353 aa16.36■□□□□ 0.21
ACTN1-205ENST00000538545 TMC4Q7Z404 712 aa16.36■□□□□ 0.21
ACTN1-205ENST00000538545 CLIC6Q96NY7 704 aa16.36■□□□□ 0.21
ACTN1-205ENST00000538545 FUCA2Q9BTY2 467 aa16.36■□□□□ 0.21
ACTN1-205ENST00000538545 ECE2O60344 883 aa16.36■□□□□ 0.21
ACTN1-205ENST00000538545 PLCB2Q00722 1185 aa16.36■□□□□ 0.21
ACTN1-205ENST00000538545 ANO1Q5XXA6 986 aa16.36■□□□□ 0.21
ACTN1-205ENST00000538545 ZNF444Q8N0Y2 327 aaPredicted RBP16.36■□□□□ 0.21
ACTN1-205ENST00000538545 USP40Q9NVE5 1235 aa16.36■□□□□ 0.21
ACTN1-205ENST00000538545 RTEL1Q9NZ71 1219 aa16.36■□□□□ 0.21
ACTN1-205ENST00000538545 GAKO14976 1311 aa16.36■□□□□ 0.21
ACTN1-205ENST00000538545 ZBTB7AO95365 584 aa16.35■□□□□ 0.21
ACTN1-205ENST00000538545 RBM5P52756 815 aaKnown RBP eCLIP16.35■□□□□ 0.21
ACTN1-205ENST00000538545 SNW1Q13573 536 aaKnown RBP16.35■□□□□ 0.21
ACTN1-205ENST00000538545 SHROOM1Q2M3G4 852 aaPredicted RBP16.35■□□□□ 0.21
ACTN1-205ENST00000538545 WNT7AO00755 349 aa16.35■□□□□ 0.21
ACTN1-205ENST00000538545 SPTLC2O15270 562 aa16.35■□□□□ 0.21
ACTN1-205ENST00000538545 DEXIO95424 95 aa16.35■□□□□ 0.21
ACTN1-205ENST00000538545 MMP1P03956 469 aa16.35■□□□□ 0.21
ACTN1-205ENST00000538545 SF3B2Q13435 895 aaKnown RBP16.35■□□□□ 0.21
ACTN1-205ENST00000538545 PNMA1Q8ND90 353 aa16.35■□□□□ 0.21
ACTN1-205ENST00000538545 NDUFA8P51970 172 aa16.34■□□□□ 0.21
ACTN1-205ENST00000538545 GRIN1Q05586 938 aa16.34■□□□□ 0.21
ACTN1-205ENST00000538545 EYA3Q99504 573 aa16.34■□□□□ 0.21
ACTN1-205ENST00000538545 CCDC196A0A1B0GTZ2 297 aa16.34■□□□□ 0.21
ACTN1-205ENST00000538545 TOB1P50616 345 aaPredicted RBP16.34■□□□□ 0.21
ACTN1-205ENST00000538545 MAP3K11Q16584 847 aa16.34■□□□□ 0.21
ACTN1-205ENST00000538545 SLC35G1Q2M3R5 365 aa16.34■□□□□ 0.21
ACTN1-205ENST00000538545 CDC42EP5Q6NZY7 148 aa16.34■□□□□ 0.21
ACTN1-205ENST00000538545 TMTC3Q6ZXV5 915 aa16.34■□□□□ 0.21
ACTN1-205ENST00000538545 CTCFLQ8NI51 663 aaPredicted RBP16.34■□□□□ 0.21
ACTN1-205ENST00000538545 GPKOWQ92917 476 aaPredicted RBP eCLIP16.34■□□□□ 0.21
ACTN1-205ENST00000538545 KAT14Q9H8E8 782 aa16.34■□□□□ 0.21
ACTN1-205ENST00000538545 DDX60LQ5H9U9 1706 aaKnown RBP16.34■□□□□ 0.21
ACTN1-205ENST00000538545 AKAP17AQ02040 695 aaKnown RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms