RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 KDM4AO75164 1064 aa24.26■■□□□ 1.47
COPS7A-208ENST00000538410 NOL8Q76FK4 1167 aaKnown RBP24.26■■□□□ 1.47
COPS7A-208ENST00000538410 CYB5R4Q7L1T6 521 aa24.26■■□□□ 1.47
COPS7A-208ENST00000538410 LRRC2Q9BYS8 371 aa24.26■■□□□ 1.47
COPS7A-208ENST00000538410 COL2A1P02458 1487 aaPredicted RBP24.25■■□□□ 1.47
COPS7A-208ENST00000538410 CLRN2A0PK11 232 aa24.25■■□□□ 1.47
COPS7A-208ENST00000538410 MYO1BO43795 1136 aa24.25■■□□□ 1.47
COPS7A-208ENST00000538410 ENTPD3O75355 529 aa24.25■■□□□ 1.47
COPS7A-208ENST00000538410 ZFPM1Q8IX07 1006 aa24.25■■□□□ 1.47
COPS7A-208ENST00000538410 FBXL16Q8N461 479 aa24.25■■□□□ 1.47
COPS7A-208ENST00000538410 C2orf69Q8N8R5 385 aa24.25■■□□□ 1.47
COPS7A-208ENST00000538410 DYNLL2Q96FJ2 89 aa24.25■■□□□ 1.47
COPS7A-208ENST00000538410 AGXT2Q9BYV1 514 aa24.25■■□□□ 1.47
COPS7A-208ENST00000538410 GBA2Q9HCG7 927 aaPredicted RBP24.25■■□□□ 1.47
COPS7A-208ENST00000538410 ZSWIM5Q9P217 1185 aa24.25■■□□□ 1.47
COPS7A-208ENST00000538410 LIMCH1Q9UPQ0 1083 aa24.25■■□□□ 1.47
COPS7A-208ENST00000538410 TCP10Q12799 353 aa24.24■■□□□ 1.47
COPS7A-208ENST00000538410 FKBP1CQ5VVH2 108 aa24.24■■□□□ 1.47
COPS7A-208ENST00000538410 ESR2Q92731 530 aa24.24■■□□□ 1.47
COPS7A-208ENST00000538410 CDCA5Q96FF9 252 aa24.24■■□□□ 1.47
COPS7A-208ENST00000538410 PRDM1O75626 825 aa24.24■■□□□ 1.47
COPS7A-208ENST00000538410 HUNKP57058 714 aa24.24■■□□□ 1.47
COPS7A-208ENST00000538410 FGD1P98174 961 aa24.24■■□□□ 1.47
COPS7A-208ENST00000538410 MAP2K1Q02750 393 aaPredicted RBP24.24■■□□□ 1.47
COPS7A-208ENST00000538410 C16orf86Q6ZW13 317 aa24.24■■□□□ 1.47
COPS7A-208ENST00000538410 TMX3Q96JJ7 454 aa24.24■■□□□ 1.47
COPS7A-208ENST00000538410 DHX36Q9H2U1 1008 aaKnown RBP24.24■■□□□ 1.47
COPS7A-208ENST00000538410 WBP1LQ9NX94 342 aa24.24■■□□□ 1.47
COPS7A-208ENST00000538410 HLA-DOAP06340 250 aa24.23■■□□□ 1.47
COPS7A-208ENST00000538410 LARP6Q9BRS8 491 aaKnown RBP24.23■■□□□ 1.47
COPS7A-208ENST00000538410 THSD7BQ9C0I4 1608 aa24.22■■□□□ 1.47
COPS7A-208ENST00000538410 NT5C2P49902 561 aa24.22■■□□□ 1.47
COPS7A-208ENST00000538410 BRF1Q92994 677 aa24.22■■□□□ 1.47
COPS7A-208ENST00000538410 TMEM87BQ96K49 555 aa24.22■■□□□ 1.47
COPS7A-208ENST00000538410 ZSCAN31Q96LW9 406 aaPredicted RBP24.22■■□□□ 1.47
COPS7A-208ENST00000538410 ZNF287Q9HBT7 754 aa24.22■■□□□ 1.47
COPS7A-208ENST00000538410 ATRNL1Q5VV63 1379 aa24.22■■□□□ 1.47
COPS7A-208ENST00000538410 TCP10L2B9ZVM9 353 aa24.21■■□□□ 1.47
COPS7A-208ENST00000538410 FOXN1O15353 648 aa24.21■■□□□ 1.47
COPS7A-208ENST00000538410 GABPAQ06546 454 aa24.21■■□□□ 1.47
COPS7A-208ENST00000538410 COL13A1Q5TAT6 717 aaPredicted RBP24.21■■□□□ 1.47
COPS7A-208ENST00000538410 SH3BP5LQ7L8J4 393 aa24.21■■□□□ 1.47
COPS7A-208ENST00000538410 MTA3Q9BTC8 594 aa24.21■■□□□ 1.47
COPS7A-208ENST00000538410 MKNK2Q9HBH9 465 aa24.21■■□□□ 1.47
COPS7A-208ENST00000538410 VEZTQ9HBM0 779 aa24.21■■□□□ 1.47
COPS7A-208ENST00000538410 SCAF8Q9UPN6 1271 aaKnown RBP24.21■■□□□ 1.47
COPS7A-208ENST00000538410 DDTLA6NHG4 134 aaPredicted RBP24.21■■□□□ 1.47
COPS7A-208ENST00000538410 RANBP6O60518 1105 aaKnown RBP24.21■■□□□ 1.47
COPS7A-208ENST00000538410 MAP2K2P36507 400 aa24.21■■□□□ 1.47
COPS7A-208ENST00000538410 CDK8P49336 464 aa24.21■■□□□ 1.47
COPS7A-208ENST00000538410 SLC44A5Q8NCS7 719 aa24.21■■□□□ 1.47
COPS7A-208ENST00000538410 FAM151AQ8WW52 585 aa24.21■■□□□ 1.47
COPS7A-208ENST00000538410 EHD4Q9H223 541 aa24.21■■□□□ 1.47
COPS7A-208ENST00000538410 TPCN1Q9ULQ1 816 aa24.21■■□□□ 1.47
COPS7A-208ENST00000538410 AOC2O75106 756 aa24.2■■□□□ 1.46
COPS7A-208ENST00000538410 FAM83AQ86UY5 434 aa24.2■■□□□ 1.46
COPS7A-208ENST00000538410 ZSCAN29Q8IWY8 852 aaPredicted RBP24.2■■□□□ 1.46
COPS7A-208ENST00000538410 SERPINB13Q9UIV8 391 aa24.2■■□□□ 1.46
COPS7A-208ENST00000538410 SH2B2O14492 632 aaPredicted RBP24.19■■□□□ 1.46
COPS7A-208ENST00000538410 IGDCC4Q8TDY8 1250 aa24.19■■□□□ 1.46
COPS7A-208ENST00000538410 GPHNQ9NQX3 736 aaPredicted RBP24.19■■□□□ 1.46
COPS7A-208ENST00000538410 SH2B1Q9NRF2 756 aaPredicted RBP24.19■■□□□ 1.46
COPS7A-208ENST00000538410 PI4KBQ9UBF8 816 aa24.19■■□□□ 1.46
COPS7A-208ENST00000538410 ANGEL1Q9UNK9 670 aaKnown RBP24.19■■□□□ 1.46
COPS7A-208ENST00000538410 LARGE1O95461 756 aa24.18■■□□□ 1.46
COPS7A-208ENST00000538410 ME3Q16798 604 aa24.18■■□□□ 1.46
COPS7A-208ENST00000538410 RGMBQ6NW40 437 aa24.18■■□□□ 1.46
COPS7A-208ENST00000538410 SWAP70Q9UH65 585 aa24.18■■□□□ 1.46
COPS7A-208ENST00000538410 TAOK2Q9UL54 1235 aa24.18■■□□□ 1.46
COPS7A-208ENST00000538410 IFIT3O14879 490 aaKnown RBP24.17■■□□□ 1.46
COPS7A-208ENST00000538410 RASA1P20936 1047 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 CTCFP49711 727 aaPredicted RBP24.17■■□□□ 1.46
COPS7A-208ENST00000538410 EVCP57679 992 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 APOBRQ0VD83 1088 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 CUL4AQ13619 759 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 SART3Q15020 963 aaKnown RBP24.17■■□□□ 1.46
COPS7A-208ENST00000538410 TMEM67Q5HYA8 995 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 APOBEC3FQ8IUX4 373 aaKnown RBP24.17■■□□□ 1.46
COPS7A-208ENST00000538410 ZNF444Q8N0Y2 327 aaPredicted RBP24.17■■□□□ 1.46
COPS7A-208ENST00000538410 SPRYD3Q8NCJ5 442 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 ZKSCAN3Q9BRR0 538 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 TSPY2A6NKD2 308 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 LIFRP42702 1097 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 TNNI2P48788 182 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 FAM47AQ5JRC9 791 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 IFFO2Q5TF58 517 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 PRAMEF18Q5VWM3 479 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 IQCA1Q86XH1 822 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 UBAC1Q9BSL1 405 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 BEGAINQ9BUH8 593 aa24.17■■□□□ 1.46
COPS7A-208ENST00000538410 ERICH2A1L162 156 aa24.16■■□□□ 1.46
COPS7A-208ENST00000538410 HSP90AA1P07900 732 aaKnown RBP24.16■■□□□ 1.46
COPS7A-208ENST00000538410 FKBP1BP68106 108 aa24.16■■□□□ 1.46
COPS7A-208ENST00000538410 FOXP4Q8IVH2 680 aaPredicted RBP24.16■■□□□ 1.46
COPS7A-208ENST00000538410 ZSCAN10Q96SZ4 725 aaPredicted RBP24.16■■□□□ 1.46
COPS7A-208ENST00000538410 LY9Q9HBG7 655 aa24.16■■□□□ 1.46
COPS7A-208ENST00000538410 GREB1LQ9C091 1923 aaPredicted RBP24.15■■□□□ 1.46
COPS7A-208ENST00000538410 TFAP4Q01664 338 aa24.15■■□□□ 1.46
COPS7A-208ENST00000538410 TNFAIP1Q13829 316 aa24.15■■□□□ 1.46
COPS7A-208ENST00000538410 METTL16Q86W50 562 aaKnown RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms