RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 USP17L5A8MUK1 530 aa15.79■□□□□ 0.12
COPS7A-207ENST00000538375 IGF2BP3O00425 579 aaKnown RBP eCLIP15.79■□□□□ 0.12
COPS7A-207ENST00000538375 MPHOSPH10O00566 681 aaKnown RBP15.79■□□□□ 0.12
COPS7A-207ENST00000538375 ALDH1A1P00352 501 aa15.79■□□□□ 0.12
COPS7A-207ENST00000538375 ASNSP08243 561 aa15.79■□□□□ 0.12
COPS7A-207ENST00000538375 SPP2Q13103 211 aa15.79■□□□□ 0.12
COPS7A-207ENST00000538375 TATDN1Q6P1N9 297 aa15.79■□□□□ 0.12
COPS7A-207ENST00000538375 IFNL3Q8IZI9 196 aa15.79■□□□□ 0.12
COPS7A-207ENST00000538375 PTPN18Q99952 460 aa15.79■□□□□ 0.12
COPS7A-207ENST00000538375 MCOLN1Q9GZU1 580 aa15.79■□□□□ 0.12
COPS7A-207ENST00000538375 AS3MTQ9HBK9 375 aa15.79■□□□□ 0.12
COPS7A-207ENST00000538375 CABP5Q9NP86 173 aa15.79■□□□□ 0.12
COPS7A-207ENST00000538375 SAGE1Q9NXZ1 904 aa15.79■□□□□ 0.12
COPS7A-207ENST00000538375 ARPP21Q9UBL0 812 aaPredicted RBP15.79■□□□□ 0.12
COPS7A-207ENST00000538375 AFG3L2Q9Y4W6 797 aa15.79■□□□□ 0.12
COPS7A-207ENST00000538375 FOCADQ5VW36 1801 aa15.78■□□□□ 0.12
COPS7A-207ENST00000538375 A0A0D9SFI3 127 aa15.78■□□□□ 0.12
COPS7A-207ENST00000538375 TESPA1A2RU30 521 aaPredicted RBP15.78■□□□□ 0.12
COPS7A-207ENST00000538375 SMIM22K7EJ46 135 aa15.78■□□□□ 0.12
COPS7A-207ENST00000538375 CXCL11O14625 94 aa15.78■□□□□ 0.12
COPS7A-207ENST00000538375 GH2P01242 217 aa15.78■□□□□ 0.12
COPS7A-207ENST00000538375 JAG1P78504 1218 aa15.78■□□□□ 0.12
COPS7A-207ENST00000538375 RAB3GAP1Q15042 981 aa15.78■□□□□ 0.12
COPS7A-207ENST00000538375 ABCB5Q2M3G0 1257 aa15.78■□□□□ 0.12
COPS7A-207ENST00000538375 SHROOM1Q2M3G4 852 aaPredicted RBP15.78■□□□□ 0.12
COPS7A-207ENST00000538375 GIMAP6Q6P9H5 292 aa15.78■□□□□ 0.12
COPS7A-207ENST00000538375 CWC27Q6UX04 472 aaKnown RBP15.78■□□□□ 0.12
COPS7A-207ENST00000538375 GADL1Q6ZQY3 521 aa15.78■□□□□ 0.12
COPS7A-207ENST00000538375 TICAM2Q86XR7 235 aa15.78■□□□□ 0.12
COPS7A-207ENST00000538375 SLC44A5Q8NCS7 719 aa15.78■□□□□ 0.12
COPS7A-207ENST00000538375 NAPBQ9H115 298 aa15.78■□□□□ 0.12
COPS7A-207ENST00000538375 SWAP70Q9UH65 585 aa15.78■□□□□ 0.12
COPS7A-207ENST00000538375 HIP1O00291 1037 aa15.77■□□□□ 0.12
COPS7A-207ENST00000538375 SHMT1P34896 483 aa15.77■□□□□ 0.12
COPS7A-207ENST00000538375 CDK8P49336 464 aa15.77■□□□□ 0.12
COPS7A-207ENST00000538375 SKAP1Q86WV1 359 aa15.77■□□□□ 0.12
COPS7A-207ENST00000538375 FAM43AQ8N2R8 423 aa15.77■□□□□ 0.12
COPS7A-207ENST00000538375 ZNF280CQ8ND82 737 aa15.77■□□□□ 0.12
COPS7A-207ENST00000538375 ZBTB21Q9ULJ3 1066 aa15.77■□□□□ 0.12
COPS7A-207ENST00000538375 KCNH4Q9UQ05 1017 aa15.77■□□□□ 0.12
COPS7A-207ENST00000538375 BTBD19C9JJ37 291 aa15.76■□□□□ 0.11
COPS7A-207ENST00000538375 GSPT1P15170 499 aaKnown RBP15.76■□□□□ 0.11
COPS7A-207ENST00000538375 GABPAQ06546 454 aa15.76■□□□□ 0.11
COPS7A-207ENST00000538375 SBK1Q52WX2 424 aa15.76■□□□□ 0.11
COPS7A-207ENST00000538375 VPS53Q5VIR6 699 aa15.76■□□□□ 0.11
COPS7A-207ENST00000538375 FASTKD5Q7L8L6 764 aaKnown RBP15.76■□□□□ 0.11
COPS7A-207ENST00000538375 MKNK2Q9HBH9 465 aa15.76■□□□□ 0.11
COPS7A-207ENST00000538375 EPB41L4AQ9HCS5 686 aaPredicted RBP15.76■□□□□ 0.11
COPS7A-207ENST00000538375 GINM1Q9NU53 330 aa15.76■□□□□ 0.11
COPS7A-207ENST00000538375 NAV1Q8NEY1 1877 aa15.76■□□□□ 0.11
COPS7A-207ENST00000538375 MFAP1P55081 439 aaKnown RBP15.75■□□□□ 0.11
COPS7A-207ENST00000538375 TAF1CQ15572 869 aaPredicted RBP15.75■□□□□ 0.11
COPS7A-207ENST00000538375 TBC1D2Q9BYX2 928 aa15.75■□□□□ 0.11
COPS7A-207ENST00000538375 R3HDMLQ9H3Y0 253 aa15.75■□□□□ 0.11
COPS7A-207ENST00000538375 ZFYVE28Q9HCC9 887 aa15.75■□□□□ 0.11
COPS7A-207ENST00000538375 PPP4R2Q9NY27 417 aa15.75■□□□□ 0.11
COPS7A-207ENST00000538375 SIPA1L1O43166 1804 aa15.74■□□□□ 0.11
COPS7A-207ENST00000538375 A0A0G2JLL6 359 aaPredicted RBP15.74■□□□□ 0.11
COPS7A-207ENST00000538375 PDHXO00330 501 aa15.74■□□□□ 0.11
COPS7A-207ENST00000538375 SLC3A2P08195 630 aaKnown RBP15.74■□□□□ 0.11
COPS7A-207ENST00000538375 MLLT1Q03111 559 aaPredicted RBP15.74■□□□□ 0.11
COPS7A-207ENST00000538375 CRHR2Q13324 411 aa15.74■□□□□ 0.11
COPS7A-207ENST00000538375 C16orf86Q6ZW13 317 aa15.74■□□□□ 0.11
COPS7A-207ENST00000538375 PRRT2Q7Z6L0 340 aaPredicted RBP15.74■□□□□ 0.11
COPS7A-207ENST00000538375 ZNF589Q86UQ0 364 aaPredicted RBP15.74■□□□□ 0.11
COPS7A-207ENST00000538375 TMOD4Q9NZQ9 345 aa15.74■□□□□ 0.11
COPS7A-207ENST00000538375 CCDC171Q6TFL3 1326 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 BAZ2AQ9UIF9 1905 aaKnown RBP15.73■□□□□ 0.11
COPS7A-207ENST00000538375 USP17L10C9JJH3 530 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 GPR25O00155 361 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 SLC34A2O95436 690 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 AKR1B1P15121 316 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 HMGCS2P54868 508 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 DGKZQ13574 1117 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 MTMR2Q13614 643 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 SEPT2Q15019 361 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 ZYXQ15942 572 aaKnown RBP15.73■□□□□ 0.11
COPS7A-207ENST00000538375 ERICH6BQ5W0A0 696 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 ANKRD23Q86SG2 305 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 ZNF444Q8N0Y2 327 aaPredicted RBP15.73■□□□□ 0.11
COPS7A-207ENST00000538375 CCDC17Q96LX7 622 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 FEZ1Q99689 392 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 WDR18Q9BV38 432 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 TAOK2Q9UL54 1235 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 DOCK1Q14185 1865 aa15.73■□□□□ 0.11
COPS7A-207ENST00000538375 C19orf81C9J6K1 198 aa15.72■□□□□ 0.11
COPS7A-207ENST00000538375 PRDM1O75626 825 aa15.72■□□□□ 0.11
COPS7A-207ENST00000538375 HSPD1P10809 573 aaKnown RBP15.72■□□□□ 0.11
COPS7A-207ENST00000538375 BACE1P56817 501 aa15.72■□□□□ 0.11
COPS7A-207ENST00000538375 ATP2B2Q01814 1243 aa15.72■□□□□ 0.11
COPS7A-207ENST00000538375 PPARAQ07869 468 aa15.72■□□□□ 0.11
COPS7A-207ENST00000538375 TMEM179Q6ZVK1 233 aa15.72■□□□□ 0.11
COPS7A-207ENST00000538375 RUFY2Q8WXA3 655 aa15.72■□□□□ 0.11
COPS7A-207ENST00000538375 ZNF287Q9HBT7 754 aa15.72■□□□□ 0.11
COPS7A-207ENST00000538375 FKTNO75072 461 aa15.71■□□□□ 0.11
COPS7A-207ENST00000538375 FGAP02671 866 aa15.71■□□□□ 0.11
COPS7A-207ENST00000538375 CTDSPL2Q05D32 466 aa15.71■□□□□ 0.11
COPS7A-207ENST00000538375 PDE4BQ07343 736 aa15.71■□□□□ 0.11
COPS7A-207ENST00000538375 MOGSQ13724 837 aa15.71■□□□□ 0.11
COPS7A-207ENST00000538375 GPAT2Q6NUI2 795 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms