RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-208	ENST00000538021	WDR18	Q9BV38	432 aa		13.83	□□□□□ -0.2
CLPB-208	ENST00000538021	TTYH1	Q9H313	450 aa	Predicted RBP	13.83	□□□□□ -0.2
CLPB-208	ENST00000538021	MAST2	Q6P0Q8	1798 aa		13.83	□□□□□ -0.2
CLPB-208	ENST00000538021	NPM3	O75607	178 aa	Known RBP	13.82	□□□□□ -0.2
CLPB-208	ENST00000538021	CIAO1	O76071	339 aa		13.82	□□□□□ -0.2
CLPB-208	ENST00000538021	WDR78	Q5VTH9	848 aa		13.82	□□□□□ -0.2
CLPB-208	ENST00000538021	MFSD14C	Q5VZR4	134 aa		13.82	□□□□□ -0.2
CLPB-208	ENST00000538021	MRPL50	Q8N5N7	158 aa	Known RBP	13.82	□□□□□ -0.2
CLPB-208	ENST00000538021	LPAR1	Q92633	364 aa		13.82	□□□□□ -0.2
CLPB-208	ENST00000538021	EDC3	Q96F86	508 aa	Known RBP	13.82	□□□□□ -0.2
CLPB-208	ENST00000538021	DDX20	Q9UHI6	824 aa	Known RBP	13.82	□□□□□ -0.2
CLPB-208	ENST00000538021	HERC5	Q9UII4	1024 aa	Known RBP	13.82	□□□□□ -0.2
CLPB-208	ENST00000538021	FBXO3	Q9UK99	471 aa		13.82	□□□□□ -0.2
CLPB-208	ENST00000538021	NDUFB9	Q9Y6M9	179 aa		13.82	□□□□□ -0.2
CLPB-208	ENST00000538021	TTC28	Q96AY4	2481 aa		13.81	□□□□□ -0.2
CLPB-208	ENST00000538021	C19orf81	C9J6K1	198 aa		13.81	□□□□□ -0.2
CLPB-208	ENST00000538021	USP17L10	C9JJH3	530 aa		13.81	□□□□□ -0.2
CLPB-208	ENST00000538021	DNM1L	O00429	736 aa		13.81	□□□□□ -0.2
CLPB-208	ENST00000538021	ASNS	P08243	561 aa		13.81	□□□□□ -0.2
CLPB-208	ENST00000538021	IL15	P40933	162 aa	Predicted RBP	13.81	□□□□□ -0.2
CLPB-208	ENST00000538021	TIMM10	P62072	90 aa		13.81	□□□□□ -0.2
CLPB-208	ENST00000538021	MAP2K5	Q13163	448 aa		13.81	□□□□□ -0.2
CLPB-208	ENST00000538021	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.81	□□□□□ -0.2
CLPB-208	ENST00000538021	BAD	Q92934	168 aa		13.81	□□□□□ -0.2
CLPB-208	ENST00000538021	FLRT1	Q9NZU1	646 aa		13.81	□□□□□ -0.2
CLPB-208	ENST00000538021	RAPGEFL1	Q9UHV5	662 aa		13.81	□□□□□ -0.2
CLPB-208	ENST00000538021	PTPRC	P08575	1304 aa		13.81	□□□□□ -0.2
CLPB-208	ENST00000538021	FRMPD3	Q5JV73	1810 aa		13.8	□□□□□ -0.2
CLPB-208	ENST00000538021	TNFRSF10A	O00220	468 aa		13.8	□□□□□ -0.2
CLPB-208	ENST00000538021	MSC	O60682	206 aa		13.8	□□□□□ -0.2
CLPB-208	ENST00000538021	GLRX3	O76003	335 aa	Known RBP	13.8	□□□□□ -0.2
CLPB-208	ENST00000538021	LDHC	P07864	332 aa		13.8	□□□□□ -0.2
CLPB-208	ENST00000538021	SMAD3	P84022	425 aa	Known RBP	13.8	□□□□□ -0.2
CLPB-208	ENST00000538021	TJAP1	Q5JTD0	557 aa		13.8	□□□□□ -0.2
CLPB-208	ENST00000538021	GJC2	Q5T442	439 aa	Predicted RBP	13.8	□□□□□ -0.2
CLPB-208	ENST00000538021	TEX11	Q8IYF3	940 aa		13.8	□□□□□ -0.2
CLPB-208	ENST00000538021	ZNF384	Q8TF68	577 aa		13.8	□□□□□ -0.2
CLPB-208	ENST00000538021	PI4KB	Q9UBF8	816 aa		13.8	□□□□□ -0.2
CLPB-208	ENST00000538021	PA2G4	Q9UQ80	394 aa	Known RBP	13.8	□□□□□ -0.2
CLPB-208	ENST00000538021	PDS5A	Q29RF7	1337 aa	Known RBP	13.8	□□□□□ -0.2
CLPB-208	ENST00000538021	LTBP2	Q14767	1821 aa		13.8	□□□□□ -0.2
CLPB-208	ENST00000538021	GDF11	O95390	407 aa		13.79	□□□□□ -0.2
CLPB-208	ENST00000538021	MAP4K4	O95819	1239 aa	Predicted RBP	13.79	□□□□□ -0.2
CLPB-208	ENST00000538021	MYCN	P04198	464 aa	Predicted RBP	13.79	□□□□□ -0.2
CLPB-208	ENST00000538021	GSTO1	P78417	241 aa		13.79	□□□□□ -0.2
CLPB-208	ENST00000538021	JAG1	P78504	1218 aa		13.79	□□□□□ -0.2
CLPB-208	ENST00000538021	ATP2B2	Q01814	1243 aa		13.79	□□□□□ -0.2
CLPB-208	ENST00000538021	TRIM34	Q9BYJ4	488 aa		13.79	□□□□□ -0.2
CLPB-208	ENST00000538021	RAI14	Q9P0K7	980 aa		13.79	□□□□□ -0.2
CLPB-208	ENST00000538021	ZBTB22	O15209	634 aa		13.78	□□□□□ -0.2
CLPB-208	ENST00000538021	CYP2C19	P33261	490 aa		13.78	□□□□□ -0.2
CLPB-208	ENST00000538021	CCNA1	P78396	465 aa		13.78	□□□□□ -0.2
CLPB-208	ENST00000538021	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.78	□□□□□ -0.2
CLPB-208	ENST00000538021	POTEE	Q6S8J3	1075 aa		13.78	□□□□□ -0.2
CLPB-208	ENST00000538021	SLC39A5	Q6ZMH5	540 aa		13.78	□□□□□ -0.2
CLPB-208	ENST00000538021	TBC1D9	Q6ZT07	1266 aa		13.78	□□□□□ -0.2
CLPB-208	ENST00000538021	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.78	□□□□□ -0.2
CLPB-208	ENST00000538021	NSUN4	Q96CB9	384 aa	Known RBP	13.78	□□□□□ -0.2
CLPB-208	ENST00000538021	XAGE2	Q96GT9	111 aa		13.78	□□□□□ -0.2
CLPB-208	ENST00000538021	MRS2	Q9HD23	443 aa		13.78	□□□□□ -0.2
CLPB-208	ENST00000538021		A0A1B0GUL7	405 aa		13.77	□□□□□ -0.21
CLPB-208	ENST00000538021	KBTBD13	C9JR72	458 aa		13.77	□□□□□ -0.21
CLPB-208	ENST00000538021	UBTFL1	P0CB47	393 aa	Predicted RBP	13.77	□□□□□ -0.21
CLPB-208	ENST00000538021	PTPRE	P23469	700 aa		13.77	□□□□□ -0.21
CLPB-208	ENST00000538021	MVP	Q14764	893 aa	Known RBP	13.77	□□□□□ -0.21
CLPB-208	ENST00000538021	TRIM60	Q495X7	471 aa		13.77	□□□□□ -0.21
CLPB-208	ENST00000538021	ANO1	Q5XXA6	986 aa		13.77	□□□□□ -0.21
CLPB-208	ENST00000538021	USP17L2	Q6R6M4	530 aa		13.77	□□□□□ -0.21
CLPB-208	ENST00000538021	USP38	Q8NB14	1042 aa		13.77	□□□□□ -0.21
CLPB-208	ENST00000538021	ARRDC4	Q8NCT1	418 aa		13.77	□□□□□ -0.21
CLPB-208	ENST00000538021	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.77	□□□□□ -0.21
CLPB-208	ENST00000538021	NOL10	Q9BSC4	688 aa	Known RBP	13.77	□□□□□ -0.21
CLPB-208	ENST00000538021	EMILIN3	Q9NT22	766 aa		13.77	□□□□□ -0.21
CLPB-208	ENST00000538021	RABGAP1	Q9Y3P9	1069 aa		13.77	□□□□□ -0.21
CLPB-208	ENST00000538021	IVNS1ABP	Q9Y6Y0	642 aa		13.77	□□□□□ -0.21
CLPB-208	ENST00000538021	TMEM265	A0A087WTH1	108 aa		13.76	□□□□□ -0.21
CLPB-208	ENST00000538021	SLC15A5	A6NIM6	579 aa		13.76	□□□□□ -0.21
CLPB-208	ENST00000538021	ZYX	Q15942	572 aa	Known RBP	13.76	□□□□□ -0.21
CLPB-208	ENST00000538021	PI16	Q6UXB8	463 aa		13.76	□□□□□ -0.21
CLPB-208	ENST00000538021	SH3RF1	Q7Z6J0	888 aa		13.76	□□□□□ -0.21
CLPB-208	ENST00000538021	TRPV1	Q8NER1	839 aa		13.76	□□□□□ -0.21
CLPB-208	ENST00000538021	NPLOC4	Q8TAT6	608 aa		13.76	□□□□□ -0.21
CLPB-208	ENST00000538021	RNPC3	Q96LT9	517 aa	Known RBP	13.76	□□□□□ -0.21
CLPB-208	ENST00000538021	NEUROD6	Q96NK8	337 aa		13.76	□□□□□ -0.21
CLPB-208	ENST00000538021	DHX36	Q9H2U1	1008 aa	Known RBP	13.76	□□□□□ -0.21
CLPB-208	ENST00000538021	HMG20B	Q9P0W2	317 aa		13.76	□□□□□ -0.21
CLPB-208	ENST00000538021	ZBTB21	Q9ULJ3	1066 aa		13.76	□□□□□ -0.21
CLPB-208	ENST00000538021	TRIM43B	A6NCK2	446 aa		13.75	□□□□□ -0.21
CLPB-208	ENST00000538021	CNMD	O75829	334 aa		13.75	□□□□□ -0.21
CLPB-208	ENST00000538021	GRIN2C	Q14957	1233 aa		13.75	□□□□□ -0.21
CLPB-208	ENST00000538021	MAPKAPK5	Q8IW41	473 aa		13.75	□□□□□ -0.21
CLPB-208	ENST00000538021	SPATA5	Q8NB90	893 aa		13.75	□□□□□ -0.21
CLPB-208	ENST00000538021	SSH1	Q8WYL5	1049 aa		13.75	□□□□□ -0.21
CLPB-208	ENST00000538021	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.75	□□□□□ -0.21
CLPB-208	ENST00000538021	DNAJC18	Q9H819	358 aa		13.75	□□□□□ -0.21
CLPB-208	ENST00000538021	PDLIM7	Q9NR12	457 aa		13.75	□□□□□ -0.21
CLPB-208	ENST00000538021	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
CLPB-208	ENST00000538021	AKAP2	Q9Y2D5	859 aa		13.75	□□□□□ -0.21
CLPB-208	ENST00000538021	RLF	Q13129	1914 aa		13.74	□□□□□ -0.21
CLPB-208	ENST00000538021	USP17L15	C9J2P7	530 aa		13.74	□□□□□ -0.21

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