RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 WNT7AO00755 349 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 SLC3A2P08195 630 aaKnown RBP10.76□□□□□ -0.69
PTPRR-205ENST00000537619 USP17L8P0C7I0 530 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 GYS1P13807 737 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 CDC25BP30305 580 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 SYKP43405 635 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 GPSM2P81274 684 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 NPY5RQ15761 445 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 SLC4A8Q2Y0W8 1093 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 SBK1Q52WX2 424 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 IFIT1BQ5T764 474 aaKnown RBP10.76□□□□□ -0.69
PTPRR-205ENST00000537619 RNF26Q9BY78 433 aaPredicted RBP10.76□□□□□ -0.69
PTPRR-205ENST00000537619 BCL11BQ9C0K0 894 aaPredicted RBP10.76□□□□□ -0.69
PTPRR-205ENST00000537619 FOXP1Q9H334 677 aaPredicted RBP10.76□□□□□ -0.69
PTPRR-205ENST00000537619 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.76□□□□□ -0.69
PTPRR-205ENST00000537619 VPS54Q9P1Q0 977 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 FBXO2Q9UK22 296 aaPredicted RBP10.76□□□□□ -0.69
PTPRR-205ENST00000537619 PCDHB6Q9Y5E3 794 aa10.76□□□□□ -0.69
PTPRR-205ENST00000537619 CCDC196A0A1B0GTZ2 297 aa10.75□□□□□ -0.69
PTPRR-205ENST00000537619 CUTAO60888 179 aa10.75□□□□□ -0.69
PTPRR-205ENST00000537619 HSPA1LP34931 641 aa10.75□□□□□ -0.69
PTPRR-205ENST00000537619 NLRP12P59046 1061 aa10.75□□□□□ -0.69
PTPRR-205ENST00000537619 NOM1Q5C9Z4 860 aaKnown RBP10.75□□□□□ -0.69
PTPRR-205ENST00000537619 SPECC1Q5M775 1068 aa10.75□□□□□ -0.69
PTPRR-205ENST00000537619 TMTC3Q6ZXV5 915 aa10.75□□□□□ -0.69
PTPRR-205ENST00000537619 METTL16Q86W50 562 aaKnown RBP10.75□□□□□ -0.69
PTPRR-205ENST00000537619 CEP57L1Q8IYX8 460 aa10.75□□□□□ -0.69
PTPRR-205ENST00000537619 TIGD1Q96MW7 591 aa10.75□□□□□ -0.69
PTPRR-205ENST00000537619 ATP8A2Q9NTI2 1148 aa10.75□□□□□ -0.69
PTPRR-205ENST00000537619 CLIP2Q9UDT6 1046 aa10.75□□□□□ -0.69
PTPRR-205ENST00000537619 GOLGA6L19H0YKK7 550 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 ADAMTS3O15072 1205 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 NPHP1O15259 732 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 FOXN1O15353 648 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 PCP11498 1178 aaKnown RBP10.74□□□□□ -0.69
PTPRR-205ENST00000537619 PNOCQ13519 176 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 ARID5BQ14865 1188 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 NCAPHQ15003 741 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 DIXDC1Q155Q3 683 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 RCSD1Q6JBY9 416 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 DZIP1Q86YF9 867 aaKnown RBP10.74□□□□□ -0.69
PTPRR-205ENST00000537619 FOXP4Q8IVH2 680 aaPredicted RBP10.74□□□□□ -0.69
PTPRR-205ENST00000537619 SRBD1Q8N5C6 995 aaKnown RBP10.74□□□□□ -0.69
PTPRR-205ENST00000537619 SH3RF3Q8TEJ3 882 aaPredicted RBP10.74□□□□□ -0.69
PTPRR-205ENST00000537619 PHF20Q9BVI0 1012 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 ANKIB1Q9P2G1 1089 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 TUBE1Q9UJT0 475 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 LEMD3Q9Y2U8 911 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 CCDC88AQ3V6T2 1871 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 XDHP47989 1333 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 MYH6P13533 1939 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 GOLGA6L6A8MZA4 724 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 PRPF3O43395 683 aaKnown RBP10.74□□□□□ -0.69
PTPRR-205ENST00000537619 TPM3P06753 285 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 TPM2P07951 284 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 VEGFAP15692 232 aaPredicted RBP10.74□□□□□ -0.69
PTPRR-205ENST00000537619 ADRA2BP18089 450 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 PTPREP23469 700 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 DDR1Q08345 913 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 SAFBQ15424 915 aaKnown RBP eCLIP10.74□□□□□ -0.69
PTPRR-205ENST00000537619 LONRF3Q496Y0 759 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 CRY2Q49AN0 593 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 ISM2Q6H9L7 571 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 C15orf52Q6ZUT6 534 aaKnown RBP10.74□□□□□ -0.69
PTPRR-205ENST00000537619 CATIPQ7Z7H3 387 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 IQCA1Q86XH1 822 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 JMYQ8N9B5 988 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 KRI1Q8N9T8 703 aaKnown RBP10.74□□□□□ -0.69
PTPRR-205ENST00000537619 CERKQ8TCT0 537 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 CACTINQ8WUQ7 758 aaKnown RBP10.74□□□□□ -0.69
PTPRR-205ENST00000537619 TNFRSF25Q93038 417 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 DYNLL2Q96FJ2 89 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 MRFAP1L1Q96HT8 127 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 BPIFA3Q9BQP9 254 aa10.74□□□□□ -0.69
PTPRR-205ENST00000537619 ARPP21Q9UBL0 812 aaPredicted RBP10.74□□□□□ -0.69
PTPRR-205ENST00000537619 BECN2A8MW95 431 aa10.73□□□□□ -0.69
PTPRR-205ENST00000537619 DDAH1O94760 285 aa10.73□□□□□ -0.69
PTPRR-205ENST00000537619 TERF1P54274 439 aa10.73□□□□□ -0.69
PTPRR-205ENST00000537619 DRC7Q8IY82 874 aa10.73□□□□□ -0.69
PTPRR-205ENST00000537619 HSD3B7Q9H2F3 369 aa10.73□□□□□ -0.69
PTPRR-205ENST00000537619 V9GY48 417 aaPredicted RBP10.73□□□□□ -0.69
PTPRR-205ENST00000537619 EP400Q96L91 3159 aa10.73□□□□□ -0.69
PTPRR-205ENST00000537619 ROBO3Q96MS0 1386 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 SERPINB2P05120 415 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 LDHBP07195 334 aaKnown RBP10.72□□□□□ -0.69
PTPRR-205ENST00000537619 RBM6P78332 1123 aaKnown RBP10.72□□□□□ -0.69
PTPRR-205ENST00000537619 MDM2Q00987 491 aaPredicted RBP10.72□□□□□ -0.69
PTPRR-205ENST00000537619 PPP2R5BQ15173 497 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 C12orf60Q5U649 245 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 KRBA2Q6ZNG9 492 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 USP49Q70CQ1 688 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 WDR66Q8TBY9 1149 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 CABP5Q9NP86 173 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 IL17RBQ9NRM6 502 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 RBM28Q9NW13 759 aaKnown RBP10.72□□□□□ -0.69
PTPRR-205ENST00000537619 MCM9Q9NXL9 1143 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 TRPC5Q9UL62 973 aaPredicted RBP10.72□□□□□ -0.69
PTPRR-205ENST00000537619 KCNH3Q9ULD8 1083 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 UFL1O94874 794 aa10.72□□□□□ -0.69
PTPRR-205ENST00000537619 PRR29P0C7W0 189 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms