RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 PDCL3Q9H2J4 239 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 SUGT1Q9Y2Z0 365 aa15.67■□□□□ 0.1
SMG6-203ENST00000536871 CCDC88AQ3V6T2 1871 aa15.66■□□□□ 0.1
SMG6-203ENST00000536871 KIF5BP33176 963 aa15.66■□□□□ 0.1
SMG6-203ENST00000536871 RBM6P78332 1123 aaKnown RBP15.66■□□□□ 0.1
SMG6-203ENST00000536871 AXDND1Q5T1B0 1012 aaPredicted RBP15.66■□□□□ 0.1
SMG6-203ENST00000536871 CEP57L1Q8IYX8 460 aa15.66■□□□□ 0.1
SMG6-203ENST00000536871 NLGN1Q8N2Q7 840 aa15.66■□□□□ 0.1
SMG6-203ENST00000536871 CCDC24Q8N4L8 307 aa15.66■□□□□ 0.1
SMG6-203ENST00000536871 HOOK1Q9UJC3 728 aaKnown RBP15.66■□□□□ 0.1
SMG6-203ENST00000536871 USP5P45974 858 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.65■□□□□ 0.1
SMG6-203ENST00000536871 TXNRD3Q86VQ6 643 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 DGKHQ86XP1 1220 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 DIS3L2Q8IYB7 885 aaKnown RBP15.65■□□□□ 0.1
SMG6-203ENST00000536871 ANKS1AQ92625 1134 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 CD209Q9NNX6 404 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 TAF1P21675 1872 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 PLSCR1O15162 318 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 UFL1O94874 794 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 GNAQP50148 359 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 GPSM2P81274 684 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 TROAPQ12815 778 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 PTPAQ15257 358 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 C12orf60Q5U649 245 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 SARM1Q6SZW1 724 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 SP8Q8IXZ3 490 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 FAM163AQ96GL9 167 aaPredicted RBP15.65■□□□□ 0.1
SMG6-203ENST00000536871 AIFM3Q96NN9 605 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 BPIFA3Q9BQP9 254 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 TCP11L1Q9NUJ3 509 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 MCM9Q9NXL9 1143 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 MROH7-TTC4A0A0A0MT08 1334 aa15.65■□□□□ 0.1
SMG6-203ENST00000536871 POLRMTO00411 1230 aaKnown RBP15.64■□□□□ 0.09
SMG6-203ENST00000536871 ZNF202O95125 648 aa15.64■□□□□ 0.09
SMG6-203ENST00000536871 CDC25BP30305 580 aa15.64■□□□□ 0.09
SMG6-203ENST00000536871 NDUFA8P51970 172 aa15.64■□□□□ 0.09
SMG6-203ENST00000536871 TXNRD1Q16881 649 aa15.64■□□□□ 0.09
SMG6-203ENST00000536871 ZNF772Q68DY9 489 aaPredicted RBP15.64■□□□□ 0.09
SMG6-203ENST00000536871 KRI1Q8N9T8 703 aaKnown RBP15.64■□□□□ 0.09
SMG6-203ENST00000536871 ZNF579Q8NAF0 562 aaKnown RBP15.64■□□□□ 0.09
SMG6-203ENST00000536871 CCDC34Q96HJ3 373 aa15.64■□□□□ 0.09
SMG6-203ENST00000536871 KIAA1468Q9P260 1216 aa15.64■□□□□ 0.09
SMG6-203ENST00000536871 MKRN1Q9UHC7 482 aaKnown RBP15.64■□□□□ 0.09
SMG6-203ENST00000536871 LAMB1P07942 1786 aa15.64■□□□□ 0.09
SMG6-203ENST00000536871 A0A1B0GVL5 298 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 TSPY2A6NKD2 308 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 BECN2A8MW95 431 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 TERF1P54274 439 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 TMTC3Q6ZXV5 915 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 HPSEQ9Y251 543 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 TRIM37O94972 964 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 SYKP43405 635 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 TPM4P67936 248 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 PLCB2Q00722 1185 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 DHX8Q14562 1220 aaKnown RBP15.63■□□□□ 0.09
SMG6-203ENST00000536871 RESP18Q5W5W9 173 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 LUZP1Q86V48 1076 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 DNAJC25Q9H1X3 360 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 GJB4Q9NTQ9 266 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 FAM13BQ9NYF5 915 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 FAM205AQ6ZU69 1335 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 DLEC1Q9Y238 1755 aa15.63■□□□□ 0.09
SMG6-203ENST00000536871 GPR75-ASB3A0A0A6YYF3 556 aa15.62■□□□□ 0.09
SMG6-203ENST00000536871 PFKFB1P16118 471 aa15.62■□□□□ 0.09
SMG6-203ENST00000536871 KRT2P35908 639 aa15.62■□□□□ 0.09
SMG6-203ENST00000536871 FUT2Q10981 343 aa15.62■□□□□ 0.09
SMG6-203ENST00000536871 TMX4Q9H1E5 349 aaPredicted RBP15.62■□□□□ 0.09
SMG6-203ENST00000536871 BTBD18B2RXH4 712 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 OFD1O75665 1012 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 ALDH1B1P30837 517 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 KANK3Q6NY19 840 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 LZTS2Q9BRK4 669 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 COA1Q9GZY4 146 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 KAT14Q9H8E8 782 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 CYP2D7A0A087X1C5 515 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 TRAPPC10P48553 1259 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 IQCB1Q15051 598 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 ZNF444Q8N0Y2 327 aaPredicted RBP15.61■□□□□ 0.09
SMG6-203ENST00000536871 STK11IPQ8N1F8 1099 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 TBC1D16Q8TBP0 767 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 MAP7D2Q96T17 732 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 PHF20Q9BVI0 1012 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 TRIM5Q9C035 493 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 MKNK2Q9HBH9 465 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 SH3GLB2Q9NR46 395 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.61■□□□□ 0.09
SMG6-203ENST00000536871 ATP6V0A2Q9Y487 856 aa15.61■□□□□ 0.09
SMG6-203ENST00000536871 SMTNL1A8MU46 457 aa15.6■□□□□ 0.09
SMG6-203ENST00000536871 PPEF1O14829 653 aaPredicted RBP15.6■□□□□ 0.09
SMG6-203ENST00000536871 MYO1BO43795 1136 aa15.6■□□□□ 0.09
SMG6-203ENST00000536871 PRDM1O75626 825 aa15.6■□□□□ 0.09
SMG6-203ENST00000536871 WDHD1O75717 1129 aaPredicted RBP15.6■□□□□ 0.09
SMG6-203ENST00000536871 NPR1P16066 1061 aa15.6■□□□□ 0.09
SMG6-203ENST00000536871 PTPREP23469 700 aa15.6■□□□□ 0.09
SMG6-203ENST00000536871 CALML3P27482 149 aa15.6■□□□□ 0.09
SMG6-203ENST00000536871 GUCY1A2P33402 732 aa15.6■□□□□ 0.09
SMG6-203ENST00000536871 PDE6BP35913 854 aa15.6■□□□□ 0.09
SMG6-203ENST00000536871 DDR1Q08345 913 aa15.6■□□□□ 0.09
SMG6-203ENST00000536871 PLA2G4DQ86XP0 818 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms