RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 FAM89AQ96GI7 184 aa9.01□□□□□ -0.97
YBX3-206ENST00000536823 MYD88Q99836 296 aa9.01□□□□□ -0.97
YBX3-206ENST00000536823 METTL22Q9BUU2 404 aaPredicted RBP9.01□□□□□ -0.97
YBX3-206ENST00000536823 COL4A5P29400 1685 aa9□□□□□ -0.97
YBX3-206ENST00000536823 IRS4O14654 1257 aaPredicted RBP9□□□□□ -0.97
YBX3-206ENST00000536823 BBOX1O75936 387 aa9□□□□□ -0.97
YBX3-206ENST00000536823 PCCAP05165 728 aaPredicted RBP9□□□□□ -0.97
YBX3-206ENST00000536823 FSTL1Q12841 308 aa9□□□□□ -0.97
YBX3-206ENST00000536823 GRAPQ13588 217 aa9□□□□□ -0.97
YBX3-206ENST00000536823 SF3B3Q15393 1217 aaKnown RBP9□□□□□ -0.97
YBX3-206ENST00000536823 FIGNL1Q6PIW4 674 aa9□□□□□ -0.97
YBX3-206ENST00000536823 FCHSD1Q86WN1 690 aa9□□□□□ -0.97
YBX3-206ENST00000536823 ZBTB38Q8NAP3 1195 aaPredicted RBP9□□□□□ -0.97
YBX3-206ENST00000536823 CCDC191Q8NCU4 936 aa9□□□□□ -0.97
YBX3-206ENST00000536823 GRAPLQ8TC17 118 aaPredicted RBP9□□□□□ -0.97
YBX3-206ENST00000536823 CLUAP1Q96AJ1 413 aa9□□□□□ -0.97
YBX3-206ENST00000536823 CRISPLD1Q9H336 500 aa9□□□□□ -0.97
YBX3-206ENST00000536823 MYH16Q9H6N6 1097 aa9□□□□□ -0.97
YBX3-206ENST00000536823 ATP6V0A2Q9Y487 856 aa9□□□□□ -0.97
YBX3-206ENST00000536823 ZNF521Q96K83 1311 aa9□□□□□ -0.97
YBX3-206ENST00000536823 ZNF541Q9H0D2 1346 aa9□□□□□ -0.97
YBX3-206ENST00000536823 TAF1P21675 1872 aa9□□□□□ -0.97
YBX3-206ENST00000536823 PI4KAP2A4QPH2 592 aa8.99□□□□□ -0.97
YBX3-206ENST00000536823 FZD9O00144 591 aa8.99□□□□□ -0.97
YBX3-206ENST00000536823 APBB1O00213 710 aa8.99□□□□□ -0.97
YBX3-206ENST00000536823 TCERG1O14776 1098 aaKnown RBP8.99□□□□□ -0.97
YBX3-206ENST00000536823 DDNO94850 711 aaPredicted RBP8.99□□□□□ -0.97
YBX3-206ENST00000536823 HSP90B1P14625 803 aaKnown RBP8.99□□□□□ -0.97
YBX3-206ENST00000536823 EXOSC9Q06265 439 aaKnown RBP8.99□□□□□ -0.97
YBX3-206ENST00000536823 LRP8Q14114 963 aa8.99□□□□□ -0.97
YBX3-206ENST00000536823 KSR2Q6VAB6 950 aa8.99□□□□□ -0.97
YBX3-206ENST00000536823 G2E3Q7L622 706 aa8.99□□□□□ -0.97
YBX3-206ENST00000536823 TMC4Q7Z404 712 aa8.99□□□□□ -0.97
YBX3-206ENST00000536823 PI4KAP1Q8N8J0 262 aa8.99□□□□□ -0.97
YBX3-206ENST00000536823 TMX4Q9H1E5 349 aaPredicted RBP8.99□□□□□ -0.97
YBX3-206ENST00000536823 CWC25Q9NXE8 425 aaPredicted RBP8.99□□□□□ -0.97
YBX3-206ENST00000536823 MAP3K2Q9Y2U5 619 aa8.99□□□□□ -0.97
YBX3-206ENST00000536823 COG6Q9Y2V7 657 aa8.99□□□□□ -0.97
YBX3-206ENST00000536823 DUOX1Q9NRD9 1551 aa8.99□□□□□ -0.97
YBX3-206ENST00000536823 SCN4AP35499 1836 aa8.98□□□□□ -0.97
YBX3-206ENST00000536823 COL4A1P02462 1669 aa8.98□□□□□ -0.97
YBX3-206ENST00000536823 SPDYE3A6NKU9 549 aa8.98□□□□□ -0.97
YBX3-206ENST00000536823 VAMP4O75379 141 aa8.98□□□□□ -0.97
YBX3-206ENST00000536823 IGKV5-2P06315 115 aa8.98□□□□□ -0.97
YBX3-206ENST00000536823 PRRT3Q5FWE3 981 aa8.98□□□□□ -0.97
YBX3-206ENST00000536823 SP8Q8IXZ3 490 aa8.98□□□□□ -0.97
YBX3-206ENST00000536823 LARGE2Q8N3Y3 721 aa8.98□□□□□ -0.97
YBX3-206ENST00000536823 SMC1BQ8NDV3 1235 aa8.98□□□□□ -0.97
YBX3-206ENST00000536823 JDP2Q8WYK2 163 aa8.98□□□□□ -0.97
YBX3-206ENST00000536823 RTFDC1Q9BY42 306 aaPredicted RBP8.98□□□□□ -0.97
YBX3-206ENST00000536823 KLF15Q9UIH9 416 aa8.98□□□□□ -0.97
YBX3-206ENST00000536823 PCDHGC4Q9Y5F7 938 aa8.98□□□□□ -0.97
YBX3-206ENST00000536823 HRH3Q9Y5N1 445 aa8.98□□□□□ -0.97
YBX3-206ENST00000536823 MYH3P11055 1940 aa8.97□□□□□ -0.97
YBX3-206ENST00000536823 IQCA1LA6NCM1 817 aa8.97□□□□□ -0.97
YBX3-206ENST00000536823 CCER2I3L3R5 266 aa8.97□□□□□ -0.97
YBX3-206ENST00000536823 PPIP5K2O43314 1243 aa8.97□□□□□ -0.97
YBX3-206ENST00000536823 RAD21O60216 631 aa8.97□□□□□ -0.97
YBX3-206ENST00000536823 PDE8AO60658 829 aa8.97□□□□□ -0.97
YBX3-206ENST00000536823 FBXO45P0C2W1 286 aa8.97□□□□□ -0.97
YBX3-206ENST00000536823 NEXNQ0ZGT2 675 aa8.97□□□□□ -0.97
YBX3-206ENST00000536823 DPP8Q6V1X1 898 aaPredicted RBP8.97□□□□□ -0.97
YBX3-206ENST00000536823 NIM1KQ8IY84 436 aa8.97□□□□□ -0.97
YBX3-206ENST00000536823 SUPT20HQ8NEM7 779 aa8.97□□□□□ -0.97
YBX3-206ENST00000536823 POM121Q96HA1 1249 aa8.97□□□□□ -0.97
YBX3-206ENST00000536823 VPS33BQ9H267 617 aa8.97□□□□□ -0.97
YBX3-206ENST00000536823 AVENQ9NQS1 362 aaPredicted RBP8.97□□□□□ -0.97
YBX3-206ENST00000536823 CDHR2Q9BYE9 1310 aa8.97□□□□□ -0.97
YBX3-206ENST00000536823 LTBP1Q14766 1721 aa8.97□□□□□ -0.97
YBX3-206ENST00000536823 EIF6P56537 245 aaKnown RBP8.96□□□□□ -0.98
YBX3-206ENST00000536823 FKBP5Q13451 457 aaPredicted RBP8.96□□□□□ -0.98
YBX3-206ENST00000536823 AOC3Q16853 763 aa8.96□□□□□ -0.98
YBX3-206ENST00000536823 CWF19L2Q2TBE0 894 aaKnown RBP8.96□□□□□ -0.98
YBX3-206ENST00000536823 CCDC152Q4G0S7 254 aa8.96□□□□□ -0.98
YBX3-206ENST00000536823 GPC2Q8N158 579 aa8.96□□□□□ -0.98
YBX3-206ENST00000536823 DNAAF4Q8WXU2 420 aa8.96□□□□□ -0.98
YBX3-206ENST00000536823 CELF1Q92879 486 aaKnown RBP8.96□□□□□ -0.98
YBX3-206ENST00000536823 ZCCHC2Q9C0B9 1178 aaKnown RBP8.96□□□□□ -0.98
YBX3-206ENST00000536823 TAF1DQ9H5J8 278 aaPredicted RBP8.96□□□□□ -0.98
YBX3-206ENST00000536823 DNAAF2Q9NVR5 837 aaKnown RBP8.96□□□□□ -0.98
YBX3-206ENST00000536823 PCNTO95613 3336 aa8.95□□□□□ -0.98
YBX3-206ENST00000536823 CTSWP56202 376 aa8.95□□□□□ -0.98
YBX3-206ENST00000536823 RPS8P62241 208 aaKnown RBP8.95□□□□□ -0.98
YBX3-206ENST00000536823 KIAA2012Q0VF49 1180 aa8.95□□□□□ -0.98
YBX3-206ENST00000536823 RHBDD1Q8TEB9 315 aa8.95□□□□□ -0.98
YBX3-206ENST00000536823 JARID2Q92833 1246 aaPredicted RBP8.95□□□□□ -0.98
YBX3-206ENST00000536823 XAGE2Q96GT9 111 aa8.95□□□□□ -0.98
YBX3-206ENST00000536823 TRIM34Q9BYJ4 488 aa8.95□□□□□ -0.98
YBX3-206ENST00000536823 SEC31BQ9NQW1 1179 aa8.95□□□□□ -0.98
YBX3-206ENST00000536823 HACL1Q9UJ83 578 aa8.95□□□□□ -0.98
YBX3-206ENST00000536823 RTL9Q8NET4 1388 aa8.95□□□□□ -0.98
YBX3-206ENST00000536823 ADAMTSL1Q8N6G6 1762 aa8.94□□□□□ -0.98
YBX3-206ENST00000536823 E9PSI1 815 aa8.94□□□□□ -0.98
YBX3-206ENST00000536823 GCKRQ14397 625 aa8.94□□□□□ -0.98
YBX3-206ENST00000536823 UBE3BQ7Z3V4 1068 aa8.94□□□□□ -0.98
YBX3-206ENST00000536823 LDHDQ86WU2 507 aa8.94□□□□□ -0.98
YBX3-206ENST00000536823 LINS1Q8NG48 757 aa8.94□□□□□ -0.98
YBX3-206ENST00000536823 PRM3Q9NNZ6 103 aa8.94□□□□□ -0.98
YBX3-206ENST00000536823 DCDC2BA2VCK2 349 aa8.93□□□□□ -0.98
YBX3-206ENST00000536823 ATXN7O15265 892 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms