RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SLC45A1Q9Y2W3 748 aa21.58■■□□□ 1.04
TNFRSF1A-209ENST00000536717 TATDN1Q6P1N9 297 aa21.57■■□□□ 1.04
TNFRSF1A-209ENST00000536717 TTC6Q86TZ1 520 aa21.57■■□□□ 1.04
TNFRSF1A-209ENST00000536717 GPATCH3Q96I76 525 aa21.57■■□□□ 1.04
TNFRSF1A-209ENST00000536717 RWDD1Q9H446 243 aaPredicted RBP21.57■■□□□ 1.04
TNFRSF1A-209ENST00000536717 DCP1AQ9NPI6 582 aaPredicted RBP21.57■■□□□ 1.04
TNFRSF1A-209ENST00000536717 ZBTB21Q9ULJ3 1066 aa21.57■■□□□ 1.04
TNFRSF1A-209ENST00000536717 MBD4O95243 580 aa21.56■■□□□ 1.04
TNFRSF1A-209ENST00000536717 HMGCS2P54868 508 aa21.56■■□□□ 1.04
TNFRSF1A-209ENST00000536717 EVX2Q03828 476 aa21.56■■□□□ 1.04
TNFRSF1A-209ENST00000536717 TREML2Q5T2D2 321 aa21.56■■□□□ 1.04
TNFRSF1A-209ENST00000536717 PROCA1Q8NCQ7 364 aaPredicted RBP21.56■■□□□ 1.04
TNFRSF1A-209ENST00000536717 OTUD7AQ8TE49 926 aaPredicted RBP21.56■■□□□ 1.04
TNFRSF1A-209ENST00000536717 WDR18Q9BV38 432 aa21.56■■□□□ 1.04
TNFRSF1A-209ENST00000536717 AS3MTQ9HBK9 375 aa21.56■■□□□ 1.04
TNFRSF1A-209ENST00000536717 GINM1Q9NU53 330 aa21.56■■□□□ 1.04
TNFRSF1A-209ENST00000536717 AGTPBP1Q9UPW5 1226 aa21.56■■□□□ 1.04
TNFRSF1A-209ENST00000536717 BCRP11274 1271 aa21.55■■□□□ 1.04
TNFRSF1A-209ENST00000536717 CTGFP29279 349 aa21.55■■□□□ 1.04
TNFRSF1A-209ENST00000536717 SH3D19Q5HYK7 790 aa21.55■■□□□ 1.04
TNFRSF1A-209ENST00000536717 ERICH6BQ5W0A0 696 aa21.55■■□□□ 1.04
TNFRSF1A-209ENST00000536717 MCM9Q9NXL9 1143 aa21.55■■□□□ 1.04
TNFRSF1A-209ENST00000536717 PRKAB2O43741 272 aa21.55■■□□□ 1.04
TNFRSF1A-209ENST00000536717 POLR3DP05423 398 aaPredicted RBP21.55■■□□□ 1.04
TNFRSF1A-209ENST00000536717 SOX10P56693 466 aa21.55■■□□□ 1.04
TNFRSF1A-209ENST00000536717 GABPAQ06546 454 aa21.55■■□□□ 1.04
TNFRSF1A-209ENST00000536717 KBTBD3Q8NAB2 608 aa21.55■■□□□ 1.04
TNFRSF1A-209ENST00000536717 PUS7LQ9H0K6 701 aaKnown RBP21.55■■□□□ 1.04
TNFRSF1A-209ENST00000536717 TTC41PQ6P2S7 1318 aa21.54■■□□□ 1.04
TNFRSF1A-209ENST00000536717 SHMT1P34896 483 aa21.54■■□□□ 1.04
TNFRSF1A-209ENST00000536717 KIF22Q14807 665 aa21.54■■□□□ 1.04
TNFRSF1A-209ENST00000536717 ARHGEF6Q15052 776 aa21.54■■□□□ 1.04
TNFRSF1A-209ENST00000536717 ZSCAN25Q6NSZ9 544 aa21.54■■□□□ 1.04
TNFRSF1A-209ENST00000536717 PI4K2BQ8TCG2 481 aa21.54■■□□□ 1.04
TNFRSF1A-209ENST00000536717 SALL3Q9BXA9 1300 aa21.53■■□□□ 1.04
TNFRSF1A-209ENST00000536717 GH2P01242 217 aa21.53■■□□□ 1.04
TNFRSF1A-209ENST00000536717 BACE1P56817 501 aa21.53■■□□□ 1.04
TNFRSF1A-209ENST00000536717 MTMR2Q13614 643 aa21.53■■□□□ 1.04
TNFRSF1A-209ENST00000536717 RBBP6Q7Z6E9 1792 aaKnown RBP21.52■■□□□ 1.04
TNFRSF1A-209ENST00000536717 TNRC18O15417 2968 aaPredicted RBP21.52■■□□□ 1.04
TNFRSF1A-209ENST00000536717 ECM2O94769 699 aaPredicted RBP21.52■■□□□ 1.04
TNFRSF1A-209ENST00000536717 CERKLQ49MI3 558 aaPredicted RBP21.52■■□□□ 1.04
TNFRSF1A-209ENST00000536717 GCC1Q96CN9 775 aa21.52■■□□□ 1.04
TNFRSF1A-209ENST00000536717 ATP8A2Q9NTI2 1148 aa21.52■■□□□ 1.04
TNFRSF1A-209ENST00000536717 CYP2D6P10635 497 aa21.51■■□□□ 1.03
TNFRSF1A-209ENST00000536717 PTCH2Q9Y6C5 1203 aa21.51■■□□□ 1.03
TNFRSF1A-209ENST00000536717 MKI67P46013 3256 aaKnown RBP21.51■■□□□ 1.03
TNFRSF1A-209ENST00000536717 USP17L10C9JJH3 530 aa21.5■■□□□ 1.03
TNFRSF1A-209ENST00000536717 GNRH1P01148 92 aa21.5■■□□□ 1.03
TNFRSF1A-209ENST00000536717 MX1P20591 662 aa21.5■■□□□ 1.03
TNFRSF1A-209ENST00000536717 PSMC4P43686 418 aa21.5■■□□□ 1.03
TNFRSF1A-209ENST00000536717 ANKRD45Q5TZF3 282 aa21.5■■□□□ 1.03
TNFRSF1A-209ENST00000536717 SMCR8Q8TEV9 937 aaPredicted RBP21.5■■□□□ 1.03
TNFRSF1A-209ENST00000536717 TRIM47Q96LD4 638 aa21.5■■□□□ 1.03
TNFRSF1A-209ENST00000536717 PDE4DIPQ5VU43 2346 aa21.5■■□□□ 1.03
TNFRSF1A-209ENST00000536717 C19orf81C9J6K1 198 aa21.5■■□□□ 1.03
TNFRSF1A-209ENST00000536717 ERC2O15083 957 aa21.5■■□□□ 1.03
TNFRSF1A-209ENST00000536717 GLRX3O76003 335 aaKnown RBP21.5■■□□□ 1.03
TNFRSF1A-209ENST00000536717 IGHDP01880 384 aa21.5■■□□□ 1.03
TNFRSF1A-209ENST00000536717 PNMA3Q9UL41 463 aa21.5■■□□□ 1.03
TNFRSF1A-209ENST00000536717 SLC4A4Q9Y6R1 1079 aa21.5■■□□□ 1.03
TNFRSF1A-209ENST00000536717 SMIM22K7EJ46 135 aa21.49■■□□□ 1.03
TNFRSF1A-209ENST00000536717 GUCY1A2P33402 732 aa21.49■■□□□ 1.03
TNFRSF1A-209ENST00000536717 ABCB5Q2M3G0 1257 aa21.49■■□□□ 1.03
TNFRSF1A-209ENST00000536717 SLC44A5Q8NCS7 719 aa21.49■■□□□ 1.03
TNFRSF1A-209ENST00000536717 OSBP2Q969R2 916 aa21.49■■□□□ 1.03
TNFRSF1A-209ENST00000536717 ARMC5Q96C12 935 aa21.49■■□□□ 1.03
TNFRSF1A-209ENST00000536717 RNF113AO15541 343 aaKnown RBP21.48■■□□□ 1.03
TNFRSF1A-209ENST00000536717 PABPC4Q13310 644 aaKnown RBP eCLIP21.48■■□□□ 1.03
TNFRSF1A-209ENST00000536717 RAB3GAP1Q15042 981 aa21.48■■□□□ 1.03
TNFRSF1A-209ENST00000536717 APPBP2Q92624 585 aa21.48■■□□□ 1.03
TNFRSF1A-209ENST00000536717 DYNLL2Q96FJ2 89 aa21.48■■□□□ 1.03
TNFRSF1A-209ENST00000536717 STRBPQ96SI9 672 aaKnown RBP21.48■■□□□ 1.03
TNFRSF1A-209ENST00000536717 ASCC2Q9H1I8 757 aaPredicted RBP21.48■■□□□ 1.03
TNFRSF1A-209ENST00000536717 TMOD4Q9NZQ9 345 aa21.48■■□□□ 1.03
TNFRSF1A-209ENST00000536717 CYP2D7A0A087X1C5 515 aa21.47■■□□□ 1.03
TNFRSF1A-209ENST00000536717 USP17L12C9JPN9 530 aa21.47■■□□□ 1.03
TNFRSF1A-209ENST00000536717 USP17L21D6R901 530 aa21.47■■□□□ 1.03
TNFRSF1A-209ENST00000536717 OSBPP22059 807 aa21.47■■□□□ 1.03
TNFRSF1A-209ENST00000536717 MLLT1Q03111 559 aaPredicted RBP21.47■■□□□ 1.03
TNFRSF1A-209ENST00000536717 C12orf60Q5U649 245 aa21.47■■□□□ 1.03
TNFRSF1A-209ENST00000536717 ANKRD13CQ8N6S4 541 aa21.47■■□□□ 1.03
TNFRSF1A-209ENST00000536717 CABP5Q9NP86 173 aa21.47■■□□□ 1.03
TNFRSF1A-209ENST00000536717 EMILIN3Q9NT22 766 aa21.47■■□□□ 1.03
TNFRSF1A-209ENST00000536717 ZBTB47Q9UFB7 747 aaPredicted RBP21.47■■□□□ 1.03
TNFRSF1A-209ENST00000536717 SRRDQ9UH36 339 aa21.47■■□□□ 1.03
TNFRSF1A-209ENST00000536717 FMNL1O95466 1100 aaPredicted RBP21.46■■□□□ 1.03
TNFRSF1A-209ENST00000536717 ZFYP08048 801 aaPredicted RBP21.46■■□□□ 1.03
TNFRSF1A-209ENST00000536717 HOXA7P31268 230 aaPredicted RBP21.46■■□□□ 1.03
TNFRSF1A-209ENST00000536717 PRMT2P55345 433 aa21.46■■□□□ 1.03
TNFRSF1A-209ENST00000536717 FAM110CQ1W6H9 321 aa21.46■■□□□ 1.03
TNFRSF1A-209ENST00000536717 SMC5Q8IY18 1101 aa21.46■■□□□ 1.03
TNFRSF1A-209ENST00000536717 CCDC136Q96JN2 1154 aa21.46■■□□□ 1.03
TNFRSF1A-209ENST00000536717 FCGRTP55899 365 aa21.45■■□□□ 1.02
TNFRSF1A-209ENST00000536717 SLC9C1Q4G0N8 1177 aa21.45■■□□□ 1.02
TNFRSF1A-209ENST00000536717 ACER1Q8TDN7 264 aa21.45■■□□□ 1.02
TNFRSF1A-209ENST00000536717 SWAP70Q9UH65 585 aa21.45■■□□□ 1.02
TNFRSF1A-209ENST00000536717 GCLCP48506 637 aaPredicted RBP21.45■■□□□ 1.02
TNFRSF1A-209ENST00000536717 SEPT2Q15019 361 aa21.45■■□□□ 1.02
TNFRSF1A-209ENST00000536717 CTR9Q6PD62 1173 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms