RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 ARID5BQ14865 1188 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 TNIP1Q15025 636 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 SF3A1Q15459 793 aaKnown RBP8.95□□□□□ -0.98
CPSF7-216ENST00000536548 LRRFIP1Q32MZ4 808 aaKnown RBP8.95□□□□□ -0.98
CPSF7-216ENST00000536548 NOM1Q5C9Z4 860 aaKnown RBP8.95□□□□□ -0.98
CPSF7-216ENST00000536548 MUM1L1Q5H9M0 696 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 E4F1Q66K89 784 aaPredicted RBP8.95□□□□□ -0.98
CPSF7-216ENST00000536548 ADALQ6DHV7 355 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 SYT10Q6XYQ8 523 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 C3orf67Q6ZVT6 689 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 KCNG4Q8TDN1 519 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 EAF2Q96CJ1 260 aaPredicted RBP8.95□□□□□ -0.98
CPSF7-216ENST00000536548 CDCA5Q96FF9 252 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 TEX13AQ9BXU3 409 aaPredicted RBP8.95□□□□□ -0.98
CPSF7-216ENST00000536548 RTEL1Q9NZ71 1219 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 ORC3Q9UBD5 711 aaPredicted RBP8.95□□□□□ -0.98
CPSF7-216ENST00000536548 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.95□□□□□ -0.98
CPSF7-216ENST00000536548 SCAF8Q9UPN6 1271 aaKnown RBP8.95□□□□□ -0.98
CPSF7-216ENST00000536548 ZNF652Q9Y2D9 606 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 MAP3K2Q9Y2U5 619 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 KDM3BQ7LBC6 1761 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 PTPDC1A2A3K4 754 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 UBE2Q2LH0YL09 131 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 SOX1O00570 391 aaPredicted RBP8.94□□□□□ -0.98
CPSF7-216ENST00000536548 KCNQ3O43525 872 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 ZRANB2O95218 330 aaKnown RBP eCLIP8.94□□□□□ -0.98
CPSF7-216ENST00000536548 TUBB4BP68371 445 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 ERCC6LQ2NKX8 1250 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 MCMDC2Q4G0Z9 681 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 GRIPAP1Q4V328 841 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 DHX32Q7L7V1 743 aaKnown RBP8.94□□□□□ -0.98
CPSF7-216ENST00000536548 NBPF11Q86T75 865 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 FMR1NBQ8N0W7 255 aaPredicted RBP8.94□□□□□ -0.98
CPSF7-216ENST00000536548 NSUN7Q8NE18 718 aaKnown RBP8.94□□□□□ -0.98
CPSF7-216ENST00000536548 IPO4Q8TEX9 1081 aaKnown RBP8.94□□□□□ -0.98
CPSF7-216ENST00000536548 DDX11Q96FC9 970 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 ZNF274Q96GC6 653 aaPredicted RBP8.94□□□□□ -0.98
CPSF7-216ENST00000536548 LRCH3Q96II8 777 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 USP28Q96RU2 1077 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 MPHOSPH8Q99549 860 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 CCDC8Q9H0W5 538 aaPredicted RBP8.94□□□□□ -0.98
CPSF7-216ENST00000536548 BOLA2Q9H3K6 86 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 GOLPH3LQ9H4A5 285 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 ZNF446Q9NWS9 450 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 IFNKQ9P0W0 207 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 KIAA1468Q9P260 1216 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 FHOD1Q9Y613 1164 aa8.94□□□□□ -0.98
CPSF7-216ENST00000536548 BTBD11A6QL63 1104 aa8.93□□□□□ -0.98
CPSF7-216ENST00000536548 POTEB2H3BUK9 544 aa8.93□□□□□ -0.98
CPSF7-216ENST00000536548 DHX16O60231 1041 aaKnown RBP8.93□□□□□ -0.98
CPSF7-216ENST00000536548 MYCP01106 439 aaPredicted RBP8.93□□□□□ -0.98
CPSF7-216ENST00000536548 SLC3A2P08195 630 aaKnown RBP8.93□□□□□ -0.98
CPSF7-216ENST00000536548 PLA2G4AP47712 749 aa8.93□□□□□ -0.98
CPSF7-216ENST00000536548 CAP1Q01518 475 aa8.93□□□□□ -0.98
CPSF7-216ENST00000536548 CEBPZQ03701 1054 aaKnown RBP8.93□□□□□ -0.98
CPSF7-216ENST00000536548 NEXNQ0ZGT2 675 aa8.93□□□□□ -0.98
CPSF7-216ENST00000536548 SCRN1Q12765 414 aa8.93□□□□□ -0.98
CPSF7-216ENST00000536548 STK38Q15208 465 aa8.93□□□□□ -0.98
CPSF7-216ENST00000536548 BRAPQ7Z569 592 aa8.93□□□□□ -0.98
CPSF7-216ENST00000536548 SULF1Q8IWU6 871 aa8.93□□□□□ -0.98
CPSF7-216ENST00000536548 GPR161Q8N6U8 529 aaKnown RBP8.93□□□□□ -0.98
CPSF7-216ENST00000536548 TCEANC2Q96MN5 208 aa8.93□□□□□ -0.98
CPSF7-216ENST00000536548 XPO4Q9C0E2 1151 aaKnown RBP8.93□□□□□ -0.98
CPSF7-216ENST00000536548 HELLSQ9NRZ9 838 aa8.93□□□□□ -0.98
CPSF7-216ENST00000536548 PSD3Q9NYI0 1048 aa8.93□□□□□ -0.98
CPSF7-216ENST00000536548 GGA3Q9NZ52 723 aa8.93□□□□□ -0.98
CPSF7-216ENST00000536548 PA2G4Q9UQ80 394 aaKnown RBP8.93□□□□□ -0.98
CPSF7-216ENST00000536548 PTPN22Q9Y2R2 807 aa8.93□□□□□ -0.98
CPSF7-216ENST00000536548 SIPA1L3O60292 1781 aaPredicted RBP8.93□□□□□ -0.98
CPSF7-216ENST00000536548 RIC1Q4ADV7 1423 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 SH3TC1Q8TE82 1336 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 PSMD14O00487 310 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 TADA3O75528 432 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 FANCCQ00597 558 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 ARMCX5Q6P1M9 558 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 CTR9Q6PD62 1173 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 ARMC5Q96C12 935 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 RBM17Q96I25 401 aaKnown RBP8.92□□□□□ -0.98
CPSF7-216ENST00000536548 SUCLG2Q96I99 432 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 FMNL2Q96PY5 1086 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 CRAMP1Q96RY5 1269 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 DSCC1Q9BVC3 393 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 RTFDC1Q9BY42 306 aaPredicted RBP8.92□□□□□ -0.98
CPSF7-216ENST00000536548 AGXT2Q9BYV1 514 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 VPS33BQ9H267 617 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 PRO3102Q9H379 93 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 KCNQ5Q9NR82 932 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 POLR3EQ9NVU0 708 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 ATP6V0A2Q9Y487 856 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 CDH23Q9H251 3354 aa8.92□□□□□ -0.98
CPSF7-216ENST00000536548 SALL1Q9NSC2 1324 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 WTIPA6NIX2 430 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-216ENST00000536548 NBPF26B4DH59 902 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 ARHGAP6O43182 974 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 DTNBO60941 627 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 URI1O94763 535 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-216ENST00000536548 CASQ1P31415 396 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 HNRNPH2P55795 449 aaKnown RBP8.91□□□□□ -0.98
CPSF7-216ENST00000536548 EVCP57679 992 aa8.91□□□□□ -0.98
CPSF7-216ENST00000536548 TUBB2AQ13885 445 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms