RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 NBPF3Q9H094 633 aa15.93■□□□□ 0.14
LIG1-203ENST00000536218 MKRN1Q9UHC7 482 aaKnown RBP15.93■□□□□ 0.14
LIG1-203ENST00000536218 BCL9LQ86UU0 1499 aa15.93■□□□□ 0.14
LIG1-203ENST00000536218 CPLX1O14810 134 aa15.93■□□□□ 0.14
LIG1-203ENST00000536218 ZPR1O75312 459 aa15.93■□□□□ 0.14
LIG1-203ENST00000536218 GOLGA8FQ08AF8 430 aa15.93■□□□□ 0.14
LIG1-203ENST00000536218 GOLGA8DPQ0D2H9 430 aa15.93■□□□□ 0.14
LIG1-203ENST00000536218 HSP90B2PQ58FF3 399 aa15.93■□□□□ 0.14
LIG1-203ENST00000536218 SWT1Q5T5J6 900 aaKnown RBP15.93■□□□□ 0.14
LIG1-203ENST00000536218 LRRC31Q6UY01 552 aa15.93■□□□□ 0.14
LIG1-203ENST00000536218 EFCAB13Q8IY85 973 aa15.93■□□□□ 0.14
LIG1-203ENST00000536218 ZNF274Q96GC6 653 aaPredicted RBP15.93■□□□□ 0.14
LIG1-203ENST00000536218 NAPBQ9H115 298 aa15.93■□□□□ 0.14
LIG1-203ENST00000536218 ABCC12Q96J65 1359 aa15.92■□□□□ 0.14
LIG1-203ENST00000536218 TCRBV5S4A2TA0A5A2 114 aa15.92■□□□□ 0.14
LIG1-203ENST00000536218 KINO60870 393 aaKnown RBP15.92■□□□□ 0.14
LIG1-203ENST00000536218 RESTQ13127 1097 aa15.92■□□□□ 0.14
LIG1-203ENST00000536218 TRIM65Q6PJ69 517 aa15.92■□□□□ 0.14
LIG1-203ENST00000536218 CLEC4GQ6UXB4 293 aa15.92■□□□□ 0.14
LIG1-203ENST00000536218 AMIGO3Q86WK7 504 aa15.92■□□□□ 0.14
LIG1-203ENST00000536218 NBPF5PQ86XG9 351 aaPredicted RBP15.92■□□□□ 0.14
LIG1-203ENST00000536218 CCAR1Q8IX12 1150 aaKnown RBP15.92■□□□□ 0.14
LIG1-203ENST00000536218 SETDB2Q96T68 719 aa15.92■□□□□ 0.14
LIG1-203ENST00000536218 LLPHQ9BRT6 129 aaKnown RBP15.92■□□□□ 0.14
LIG1-203ENST00000536218 MYH3P11055 1940 aa15.92■□□□□ 0.14
LIG1-203ENST00000536218 NRAPQ86VF7 1730 aa15.92■□□□□ 0.14
LIG1-203ENST00000536218 PPP2R5AQ15172 486 aa15.92■□□□□ 0.14
LIG1-203ENST00000536218 PTPN21Q16825 1174 aa15.92■□□□□ 0.14
LIG1-203ENST00000536218 CYB5R4Q7L1T6 521 aa15.92■□□□□ 0.14
LIG1-203ENST00000536218 SUGCTQ9HAC7 445 aa15.92■□□□□ 0.14
LIG1-203ENST00000536218 RAI14Q9P0K7 980 aa15.92■□□□□ 0.14
LIG1-203ENST00000536218 IMPACTQ9P2X3 320 aa15.92■□□□□ 0.14
LIG1-203ENST00000536218 TUBB4AP04350 444 aa15.91■□□□□ 0.14
LIG1-203ENST00000536218 CNNM3Q8NE01 707 aa15.91■□□□□ 0.14
LIG1-203ENST00000536218 CEP89Q96ST8 783 aa15.91■□□□□ 0.14
LIG1-203ENST00000536218 SENP2Q9HC62 589 aa15.91■□□□□ 0.14
LIG1-203ENST00000536218 ANKRD36CQ5JPF3 1778 aa15.91■□□□□ 0.14
LIG1-203ENST00000536218 CCDC73Q6ZRK6 1079 aa15.91■□□□□ 0.14
LIG1-203ENST00000536218 IFNL3Q8IZI9 196 aa15.91■□□□□ 0.14
LIG1-203ENST00000536218 LCORLQ8N3X6 602 aa15.91■□□□□ 0.14
LIG1-203ENST00000536218 NAT10Q9H0A0 1025 aaKnown RBP15.91■□□□□ 0.14
LIG1-203ENST00000536218 CCP110O43303 1012 aa15.91■□□□□ 0.14
LIG1-203ENST00000536218 KIF1CO43896 1103 aaKnown RBP15.91■□□□□ 0.14
LIG1-203ENST00000536218 ERLIN2O94905 339 aa15.91■□□□□ 0.14
LIG1-203ENST00000536218 GOLGA1Q92805 767 aa15.91■□□□□ 0.14
LIG1-203ENST00000536218 MYL10Q9BUA6 226 aa15.91■□□□□ 0.14
LIG1-203ENST00000536218 JAG2Q9Y219 1238 aa15.91■□□□□ 0.14
LIG1-203ENST00000536218 SLC4A4Q9Y6R1 1079 aa15.91■□□□□ 0.14
LIG1-203ENST00000536218 AKAP11Q9UKA4 1901 aa15.9■□□□□ 0.14
LIG1-203ENST00000536218 EIF3JO75822 258 aaKnown RBP15.9■□□□□ 0.14
LIG1-203ENST00000536218 FDPSP14324 419 aaKnown RBP15.9■□□□□ 0.14
LIG1-203ENST00000536218 NFXL1Q6ZNB6 911 aa15.9■□□□□ 0.14
LIG1-203ENST00000536218 EPB41L4AQ9HCS5 686 aaPredicted RBP15.9■□□□□ 0.14
LIG1-203ENST00000536218 CYP7A1P22680 504 aa15.9■□□□□ 0.14
LIG1-203ENST00000536218 ADD1P35611 737 aaKnown RBP15.9■□□□□ 0.14
LIG1-203ENST00000536218 RPAINQ86UA6 219 aa15.9■□□□□ 0.14
LIG1-203ENST00000536218 MICU3Q86XE3 530 aa15.9■□□□□ 0.14
LIG1-203ENST00000536218 WDR24Q96S15 920 aa15.9■□□□□ 0.14
LIG1-203ENST00000536218 SDF4Q9BRK5 362 aa15.9■□□□□ 0.14
LIG1-203ENST00000536218 ZKSCAN3Q9BRR0 538 aa15.9■□□□□ 0.14
LIG1-203ENST00000536218 MED4Q9NPJ6 270 aa15.9■□□□□ 0.14
LIG1-203ENST00000536218 MYO5AQ9Y4I1 1855 aaKnown RBP15.9■□□□□ 0.14
LIG1-203ENST00000536218 A0A087WUV0 522 aaPredicted RBP15.89■□□□□ 0.13
LIG1-203ENST00000536218 BIN1O00499 593 aa15.89■□□□□ 0.13
LIG1-203ENST00000536218 POLR3DP05423 398 aaPredicted RBP15.89■□□□□ 0.13
LIG1-203ENST00000536218 IBSPP21815 317 aaPredicted RBP15.89■□□□□ 0.13
LIG1-203ENST00000536218 FBXW10Q5XX13 1052 aa15.89■□□□□ 0.13
LIG1-203ENST00000536218 MINPP1Q9UNW1 487 aa15.89■□□□□ 0.13
LIG1-203ENST00000536218 RTCBQ9Y3I0 505 aaKnown RBP15.89■□□□□ 0.13
LIG1-203ENST00000536218 WNK3Q9BYP7 1800 aa15.89■□□□□ 0.13
LIG1-203ENST00000536218 JAKMIP3Q5VZ66 844 aa15.89■□□□□ 0.13
LIG1-203ENST00000536218 HDXQ7Z353 690 aa15.89■□□□□ 0.13
LIG1-203ENST00000536218 RABGGTAQ92696 567 aa15.89■□□□□ 0.13
LIG1-203ENST00000536218 NLRP3Q96P20 1036 aa15.89■□□□□ 0.13
LIG1-203ENST00000536218 TFCP2L1Q9NZI6 479 aa15.89■□□□□ 0.13
LIG1-203ENST00000536218 PUF60Q9UHX1 559 aaKnown RBP15.89■□□□□ 0.13
LIG1-203ENST00000536218 HPS5Q9UPZ3 1129 aa15.89■□□□□ 0.13
LIG1-203ENST00000536218 NEDD4P46934 1319 aa15.89■□□□□ 0.13
LIG1-203ENST00000536218 KLRK1P26718 216 aa15.89■□□□□ 0.13
LIG1-203ENST00000536218 FNBP4Q8N3X1 1017 aaPredicted RBP15.89■□□□□ 0.13
LIG1-203ENST00000536218 SDR42E1Q8WUS8 393 aa15.89■□□□□ 0.13
LIG1-203ENST00000536218 CCDC151A5D8V7 595 aa15.88■□□□□ 0.13
LIG1-203ENST00000536218 MINDY4BA8MYZ0 360 aa15.88■□□□□ 0.13
LIG1-203ENST00000536218 RPS6KA4O75676 772 aa15.88■□□□□ 0.13
LIG1-203ENST00000536218 TXLNAP40222 546 aa15.88■□□□□ 0.13
LIG1-203ENST00000536218 EGFL6Q8IUX8 553 aa15.88■□□□□ 0.13
LIG1-203ENST00000536218 KAT2BQ92831 832 aa15.88■□□□□ 0.13
LIG1-203ENST00000536218 ARHGEF1Q92888 912 aaKnown RBP15.88■□□□□ 0.13
LIG1-203ENST00000536218 LAMA4Q16363 1823 aa15.88■□□□□ 0.13
LIG1-203ENST00000536218 SPEF2Q9C093 1822 aa15.88■□□□□ 0.13
LIG1-203ENST00000536218 GSG1L2A8MUP6 293 aa15.88■□□□□ 0.13
LIG1-203ENST00000536218 CTAGE5O15320 804 aa15.88■□□□□ 0.13
LIG1-203ENST00000536218 LMOD1P29536 600 aaPredicted RBP15.88■□□□□ 0.13
LIG1-203ENST00000536218 LRCH2Q5VUJ6 765 aa15.88■□□□□ 0.13
LIG1-203ENST00000536218 AIFM3Q96NN9 605 aa15.88■□□□□ 0.13
LIG1-203ENST00000536218 NARFQ9UHQ1 456 aa15.88■□□□□ 0.13
LIG1-203ENST00000536218 CARMIL3Q8ND23 1372 aa15.88■□□□□ 0.13
LIG1-203ENST00000536218 CCDC196A0A1B0GTZ2 297 aa15.87■□□□□ 0.13
LIG1-203ENST00000536218 SCP2P22307 547 aa15.87■□□□□ 0.13
LIG1-203ENST00000536218 DHX8Q14562 1220 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms