RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 KCNH4Q9UQ05 1017 aa21.41■■□□□ 1.02
DDX55-204ENST00000536079 DOCK1Q14185 1865 aa21.41■■□□□ 1.02
DDX55-204ENST00000536079 CCDC171Q6TFL3 1326 aa21.4■■□□□ 1.02
DDX55-204ENST00000536079 MINDY4BA8MYZ0 360 aa21.4■■□□□ 1.02
DDX55-204ENST00000536079 GH2P01242 217 aa21.4■■□□□ 1.02
DDX55-204ENST00000536079 CHMLP26374 656 aa21.4■■□□□ 1.02
DDX55-204ENST00000536079 GUCY1A2P33402 732 aa21.4■■□□□ 1.02
DDX55-204ENST00000536079 TDO2P48775 406 aa21.4■■□□□ 1.02
DDX55-204ENST00000536079 CDK8P49336 464 aa21.4■■□□□ 1.02
DDX55-204ENST00000536079 C16orf86Q6ZW13 317 aa21.4■■□□□ 1.02
DDX55-204ENST00000536079 IFNL1Q8IU54 200 aa21.4■■□□□ 1.02
DDX55-204ENST00000536079 R3HDMLQ9H3Y0 253 aa21.4■■□□□ 1.02
DDX55-204ENST00000536079 ARPP21Q9UBL0 812 aaPredicted RBP21.4■■□□□ 1.02
DDX55-204ENST00000536079 ZBTB21Q9ULJ3 1066 aa21.4■■□□□ 1.02
DDX55-204ENST00000536079 TACC3Q9Y6A5 838 aa21.4■■□□□ 1.02
DDX55-204ENST00000536079 CCL15-CCL14A0A0B4J2E2 113 aa21.39■■□□□ 1.01
DDX55-204ENST00000536079 TRPA1O75762 1119 aa21.39■■□□□ 1.01
DDX55-204ENST00000536079 HSPD1P10809 573 aaKnown RBP21.39■■□□□ 1.01
DDX55-204ENST00000536079 GTF2A2P52657 109 aa21.39■■□□□ 1.01
DDX55-204ENST00000536079 DGKZQ13574 1117 aa21.39■■□□□ 1.01
DDX55-204ENST00000536079 CCL15Q16663 113 aa21.39■■□□□ 1.01
DDX55-204ENST00000536079 CERKLQ49MI3 558 aaPredicted RBP21.39■■□□□ 1.01
DDX55-204ENST00000536079 DDRGK1Q96HY6 314 aa21.39■■□□□ 1.01
DDX55-204ENST00000536079 PHIPQ8WWQ0 1821 aa21.39■■□□□ 1.01
DDX55-204ENST00000536079 HSPA8P11142 646 aaKnown RBP21.38■■□□□ 1.01
DDX55-204ENST00000536079 SREBF2Q12772 1141 aa21.38■■□□□ 1.01
DDX55-204ENST00000536079 FAM43AQ8N2R8 423 aa21.38■■□□□ 1.01
DDX55-204ENST00000536079 INCENPQ9NQS7 918 aa21.38■■□□□ 1.01
DDX55-204ENST00000536079 TRIM75PA6NK02 468 aa21.37■■□□□ 1.01
DDX55-204ENST00000536079 USP17L5A8MUK1 530 aa21.37■■□□□ 1.01
DDX55-204ENST00000536079 FGAP02671 866 aa21.37■■□□□ 1.01
DDX55-204ENST00000536079 AKR1B1P15121 316 aa21.37■■□□□ 1.01
DDX55-204ENST00000536079 SNAPC2Q13487 334 aa21.37■■□□□ 1.01
DDX55-204ENST00000536079 ABCB5Q2M3G0 1257 aa21.37■■□□□ 1.01
DDX55-204ENST00000536079 REM2Q8IYK8 340 aaPredicted RBP21.37■■□□□ 1.01
DDX55-204ENST00000536079 NAPBQ9H115 298 aa21.37■■□□□ 1.01
DDX55-204ENST00000536079 LAMB1P07942 1786 aa21.37■■□□□ 1.01
DDX55-204ENST00000536079 ATAD5Q96QE3 1844 aa21.36■■□□□ 1.01
DDX55-204ENST00000536079 BTBD19C9JJ37 291 aa21.36■■□□□ 1.01
DDX55-204ENST00000536079 HIP1O00291 1037 aa21.36■■□□□ 1.01
DDX55-204ENST00000536079 CXCL11O14625 94 aa21.36■■□□□ 1.01
DDX55-204ENST00000536079 TBC1D8O95759 1140 aa21.36■■□□□ 1.01
DDX55-204ENST00000536079 ASNSP08243 561 aa21.36■■□□□ 1.01
DDX55-204ENST00000536079 PPARAQ07869 468 aa21.36■■□□□ 1.01
DDX55-204ENST00000536079 SPP2Q13103 211 aa21.36■■□□□ 1.01
DDX55-204ENST00000536079 ALX1Q15699 326 aa21.36■■□□□ 1.01
DDX55-204ENST00000536079 GPAT2Q6NUI2 795 aa21.36■■□□□ 1.01
DDX55-204ENST00000536079 NACAP1Q9BZK3 213 aa21.36■■□□□ 1.01
DDX55-204ENST00000536079 SWAP70Q9UH65 585 aa21.36■■□□□ 1.01
DDX55-204ENST00000536079 ROBO3Q96MS0 1386 aa21.36■■□□□ 1.01
DDX55-204ENST00000536079 A0A0G2JLL6 359 aaPredicted RBP21.35■■□□□ 1.01
DDX55-204ENST00000536079 CETPP11597 493 aa21.35■■□□□ 1.01
DDX55-204ENST00000536079 LBX1P52954 281 aa21.35■■□□□ 1.01
DDX55-204ENST00000536079 INHBEP58166 350 aa21.35■■□□□ 1.01
DDX55-204ENST00000536079 CTDSPL2Q05D32 466 aa21.35■■□□□ 1.01
DDX55-204ENST00000536079 SEPT2Q15019 361 aa21.35■■□□□ 1.01
DDX55-204ENST00000536079 PRRT2Q7Z6L0 340 aaPredicted RBP21.35■■□□□ 1.01
DDX55-204ENST00000536079 CLEC10AQ8IUN9 316 aa21.35■■□□□ 1.01
DDX55-204ENST00000536079 AMOTL1Q8IY63 956 aa21.35■■□□□ 1.01
DDX55-204ENST00000536079 ZNF280CQ8ND82 737 aa21.35■■□□□ 1.01
DDX55-204ENST00000536079 BEGAINQ9BUH8 593 aa21.35■■□□□ 1.01
DDX55-204ENST00000536079 PRDM1O75626 825 aa21.34■■□□□ 1.01
DDX55-204ENST00000536079 RASA1P20936 1047 aa21.34■■□□□ 1.01
DDX55-204ENST00000536079 RAB3GAP1Q15042 981 aa21.34■■□□□ 1.01
DDX55-204ENST00000536079 BMP2KLQ5H9B9 411 aa21.34■■□□□ 1.01
DDX55-204ENST00000536079 ACER1Q8TDN7 264 aa21.34■■□□□ 1.01
DDX55-204ENST00000536079 WDR18Q9BV38 432 aa21.34■■□□□ 1.01
DDX55-204ENST00000536079 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.34■■□□□ 1.01
DDX55-204ENST00000536079 MPHOSPH10O00566 681 aaKnown RBP21.33■■□□□ 1.01
DDX55-204ENST00000536079 SIAH1Q8IUQ4 282 aa21.33■■□□□ 1.01
DDX55-204ENST00000536079 NBPF3Q9H094 633 aa21.33■■□□□ 1.01
DDX55-204ENST00000536079 SAGE1Q9NXZ1 904 aa21.33■■□□□ 1.01
DDX55-204ENST00000536079 CTCFP49711 727 aaPredicted RBP21.32■■□□□ 1
DDX55-204ENST00000536079 HMGCS2P54868 508 aa21.32■■□□□ 1
DDX55-204ENST00000536079 MTMR2Q13614 643 aa21.32■■□□□ 1
DDX55-204ENST00000536079 NKX2-3Q8TAU0 364 aa21.32■■□□□ 1
DDX55-204ENST00000536079 GINM1Q9NU53 330 aa21.32■■□□□ 1
DDX55-204ENST00000536079 A0A1W2PRG0 241 aa21.31■■□□□ 1
DDX55-204ENST00000536079 HAND2P61296 217 aa21.31■■□□□ 1
DDX55-204ENST00000536079 PTH1RQ03431 593 aa21.31■■□□□ 1
DDX55-204ENST00000536079 TREML2Q5T2D2 321 aa21.31■■□□□ 1
DDX55-204ENST00000536079 GADL1Q6ZQY3 521 aa21.31■■□□□ 1
DDX55-204ENST00000536079 CABP5Q9NP86 173 aa21.31■■□□□ 1
DDX55-204ENST00000536079 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.31■■□□□ 1
DDX55-204ENST00000536079 SGSM2O43147 1006 aa21.3■■□□□ 1
DDX55-204ENST00000536079 CA12O43570 354 aa21.3■■□□□ 1
DDX55-204ENST00000536079 BACE1P56817 501 aa21.3■■□□□ 1
DDX55-204ENST00000536079 CRHR2Q13324 411 aa21.3■■□□□ 1
DDX55-204ENST00000536079 SH3D19Q5HYK7 790 aa21.3■■□□□ 1
DDX55-204ENST00000536079 ANKRD23Q86SG2 305 aa21.3■■□□□ 1
DDX55-204ENST00000536079 ANAPC4Q9UJX5 808 aa21.3■■□□□ 1
DDX55-204ENST00000536079 TAOK2Q9UL54 1235 aa21.3■■□□□ 1
DDX55-204ENST00000536079 PDHXO00330 501 aa21.29■■□□□ 1
DDX55-204ENST00000536079 MFAP1P55081 439 aaKnown RBP21.29■■□□□ 1
DDX55-204ENST00000536079 TMEM179Q6ZVK1 233 aa21.29■■□□□ 1
DDX55-204ENST00000536079 TBC1D10CQ8IV04 446 aa21.29■■□□□ 1
DDX55-204ENST00000536079 CCDC17Q96LX7 622 aa21.29■■□□□ 1
DDX55-204ENST00000536079 DSCC1Q9BVC3 393 aa21.29■■□□□ 1
DDX55-204ENST00000536079 CFHR5Q9BXR6 569 aa21.29■■□□□ 1
DDX55-204ENST00000536079 TBC1D2Q9BYX2 928 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms