RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 LEO1Q8WVC0 666 aaPredicted RBP9.33□□□□□ -0.92
COL21A1-212ENST00000535941 PGBD1Q96JS3 809 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 RNF26Q9BY78 433 aaPredicted RBP9.33□□□□□ -0.92
COL21A1-212ENST00000535941 POLR3EQ9NVU0 708 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 RTEL1Q9NZ71 1219 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 GOLGA6L22H0YM25 854 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 ZBTB43O43298 467 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 PRPF40AO75400 957 aaKnown RBP9.32□□□□□ -0.92
COL21A1-212ENST00000535941 USP17L8P0C7I0 530 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 SNHG28P0DPA3 235 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 TGFB2P61812 414 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 DDX4Q9NQI0 724 aaKnown RBP9.32□□□□□ -0.92
COL21A1-212ENST00000535941 SERPINA10Q9UK55 444 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 PRPF3O43395 683 aaKnown RBP9.32□□□□□ -0.92
COL21A1-212ENST00000535941 BAG3O95817 575 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 PLCD1P51178 756 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 CCT2P78371 535 aaKnown RBP9.32□□□□□ -0.92
COL21A1-212ENST00000535941 WTAPQ15007 396 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 BRAPQ7Z569 592 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 IPO4Q8TEX9 1081 aaKnown RBP9.32□□□□□ -0.92
COL21A1-212ENST00000535941 MYH7BA7E2Y1 1941 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 CDKL5O76039 1030 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 SMARCA1P28370 1054 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 CHRNA5P30532 468 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 CHAF1AQ13111 956 aaPredicted RBP9.32□□□□□ -0.92
COL21A1-212ENST00000535941 PTPAQ15257 358 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 TMTC3Q6ZXV5 915 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 ENGASEQ8NFI3 743 aa9.32□□□□□ -0.92
COL21A1-212ENST00000535941 RBM28Q9NW13 759 aaKnown RBP9.32□□□□□ -0.92
COL21A1-212ENST00000535941 TULP1O00294 542 aaPredicted RBP9.31□□□□□ -0.92
COL21A1-212ENST00000535941 ECE2O60344 883 aa9.31□□□□□ -0.92
COL21A1-212ENST00000535941 GRM4Q14833 912 aa9.31□□□□□ -0.92
COL21A1-212ENST00000535941 DEFB132Q7Z7B7 95 aa9.31□□□□□ -0.92
COL21A1-212ENST00000535941 FANCBQ8NB91 859 aa9.31□□□□□ -0.92
COL21A1-212ENST00000535941 SCAND2PQ9GZW5 306 aaPredicted RBP9.31□□□□□ -0.92
COL21A1-212ENST00000535941 APPP05067 770 aa9.31□□□□□ -0.92
COL21A1-212ENST00000535941 CALM1P0DP23 149 aa9.31□□□□□ -0.92
COL21A1-212ENST00000535941 CALM2P0DP24 149 aa9.31□□□□□ -0.92
COL21A1-212ENST00000535941 CALM3P0DP25 149 aa9.31□□□□□ -0.92
COL21A1-212ENST00000535941 PTGER2P43116 358 aa9.31□□□□□ -0.92
COL21A1-212ENST00000535941 CCDC178Q5BJE1 867 aa9.31□□□□□ -0.92
COL21A1-212ENST00000535941 SUPT20HQ8NEM7 779 aa9.31□□□□□ -0.92
COL21A1-212ENST00000535941 NEDD1Q8NHV4 660 aa9.31□□□□□ -0.92
COL21A1-212ENST00000535941 PHF20Q9BVI0 1012 aa9.31□□□□□ -0.92
COL21A1-212ENST00000535941 GRPEL1Q9HAV7 217 aa9.31□□□□□ -0.92
COL21A1-212ENST00000535941 IFIT3O14879 490 aaKnown RBP9.3□□□□□ -0.92
COL21A1-212ENST00000535941 DTNBO60941 627 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 VIL1P09327 827 aaKnown RBP9.3□□□□□ -0.92
COL21A1-212ENST00000535941 DNAJC18Q9H819 358 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 KCNQ5Q9NR82 932 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 MAD2L2Q9UI95 211 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 KIF3AQ9Y496 699 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 MMP1P03956 469 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 GUCY1A2P33402 732 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 MMP14P50281 582 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 KRT85P78386 507 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 MAP3K10Q02779 954 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 SNW1Q13573 536 aaKnown RBP9.3□□□□□ -0.92
COL21A1-212ENST00000535941 CDC42EP5Q6NZY7 148 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 LRSAM1Q6UWE0 723 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 PALM3A6NDB9 673 aaPredicted RBP9.3□□□□□ -0.92
COL21A1-212ENST00000535941 YEATS4O95619 227 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 GTF2IP78347 998 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 CSPP1Q1MSJ5 1256 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 TATDN1Q6P1N9 297 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 SMAP1Q8IYB5 467 aaPredicted RBP9.3□□□□□ -0.92
COL21A1-212ENST00000535941 ANP32BQ92688 251 aaKnown RBP9.3□□□□□ -0.92
COL21A1-212ENST00000535941 OSBPL5Q9H0X9 879 aaPredicted RBP9.3□□□□□ -0.92
COL21A1-212ENST00000535941 SLC12A7Q9Y666 1083 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 CNTNAP1P78357 1384 aa9.3□□□□□ -0.92
COL21A1-212ENST00000535941 A0A1W2PQ27 194 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 A0A1W2PQ64 194 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 A0A1W2PQD8 194 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 GOLGA8AA7E2F4 631 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 UBE2Q2LH0YL09 131 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 DEXIO95424 95 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 MSNP26038 577 aaKnown RBP9.29□□□□□ -0.92
COL21A1-212ENST00000535941 PDE4BQ07343 736 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 SH3BP5LQ7L8J4 393 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 LINC00301Q8NCQ3 95 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 FOXP1Q9H334 677 aaPredicted RBP9.29□□□□□ -0.92
COL21A1-212ENST00000535941 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.29□□□□□ -0.92
COL21A1-212ENST00000535941 ORC3Q9UBD5 711 aaPredicted RBP9.29□□□□□ -0.92
COL21A1-212ENST00000535941 FAM198AQ9UFP1 575 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 LCTP09848 1927 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 LRRC37A2A6NM11 1700 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 SHMT1P34896 483 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 CDK8P49336 464 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 RTN1Q16799 776 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 AXDND1Q5T1B0 1012 aaPredicted RBP9.29□□□□□ -0.92
COL21A1-212ENST00000535941 ELOA2Q8IYF1 753 aaPredicted RBP9.29□□□□□ -0.92
COL21A1-212ENST00000535941 RTKN2Q8IZC4 609 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 DAGLBQ8NCG7 672 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 TGFBRAP1Q8WUH2 860 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 JAG2Q9Y219 1238 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 DDX49Q9Y6V7 483 aaKnown RBP9.29□□□□□ -0.92
COL21A1-212ENST00000535941 NPHP1O15259 732 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 SART3Q15020 963 aaKnown RBP9.29□□□□□ -0.92
COL21A1-212ENST00000535941 MYSM1Q5VVJ2 828 aa9.29□□□□□ -0.92
COL21A1-212ENST00000535941 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms