RNA–Protein interactions for RNA: ENST00000534557.1

VPS51-215, Transcript of VPS51, GARP complex subunit, humanhuman

APPRIS ALT2 TSL 3

Gene VPS51, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-215ENST00000534557 SERPINB13Q9UIV8 391 aa22.23■■□□□ 1.15
VPS51-215ENST00000534557 TAOK2Q9UL54 1235 aa22.23■■□□□ 1.15
VPS51-215ENST00000534557 NDUFB9Q9Y6M9 179 aa22.23■■□□□ 1.15
VPS51-215ENST00000534557 POLR3DP05423 398 aaPredicted RBP22.22■■□□□ 1.15
VPS51-215ENST00000534557 GJB1P08034 283 aa22.22■■□□□ 1.15
VPS51-215ENST00000534557 CCL5P13501 91 aa22.22■■□□□ 1.15
VPS51-215ENST00000534557 IRF5Q13568 498 aa22.22■■□□□ 1.15
VPS51-215ENST00000534557 PDE3AQ14432 1141 aa22.22■■□□□ 1.15
VPS51-215ENST00000534557 RRP1BQ14684 758 aaKnown RBP22.22■■□□□ 1.15
VPS51-215ENST00000534557 MTFR1Q15390 333 aa22.22■■□□□ 1.15
VPS51-215ENST00000534557 CCAR1Q8IX12 1150 aaKnown RBP22.22■■□□□ 1.15
VPS51-215ENST00000534557 CRNKL1Q9BZJ0 848 aaKnown RBP22.22■■□□□ 1.15
VPS51-215ENST00000534557 CABP5Q9NP86 173 aa22.22■■□□□ 1.15
VPS51-215ENST00000534557 GABRQQ9UN88 632 aa22.22■■□□□ 1.15
VPS51-215ENST00000534557 HTTP42858 3142 aa22.21■■□□□ 1.15
VPS51-215ENST00000534557 GDF11O95390 407 aa22.21■■□□□ 1.15
VPS51-215ENST00000534557 GTF3C2Q8WUA4 911 aaPredicted RBP22.21■■□□□ 1.15
VPS51-215ENST00000534557 DNAJC2Q99543 621 aaKnown RBP22.21■■□□□ 1.15
VPS51-215ENST00000534557 EHD4Q9H223 541 aa22.21■■□□□ 1.15
VPS51-215ENST00000534557 ZBTB21Q9ULJ3 1066 aa22.21■■□□□ 1.15
VPS51-215ENST00000534557 HOXA7P31268 230 aaPredicted RBP22.2■■□□□ 1.14
VPS51-215ENST00000534557 CERKLQ49MI3 558 aaPredicted RBP22.2■■□□□ 1.14
VPS51-215ENST00000534557 USP17L2Q6R6M4 530 aa22.2■■□□□ 1.14
VPS51-215ENST00000534557 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.2■■□□□ 1.14
VPS51-215ENST00000534557 GOLIM4O00461 696 aa22.19■■□□□ 1.14
VPS51-215ENST00000534557 GJA8P48165 433 aa22.19■■□□□ 1.14
VPS51-215ENST00000534557 FEZ1Q99689 392 aa22.19■■□□□ 1.14
VPS51-215ENST00000534557 DNAJC18Q9H819 358 aa22.19■■□□□ 1.14
VPS51-215ENST00000534557 MAST2Q6P0Q8 1798 aa22.19■■□□□ 1.14
VPS51-215ENST00000534557 GH2P01242 217 aa22.18■■□□□ 1.14
VPS51-215ENST00000534557 PDE6AP16499 860 aa22.18■■□□□ 1.14
VPS51-215ENST00000534557 USP14P54578 494 aa22.18■■□□□ 1.14
VPS51-215ENST00000534557 TATDN1Q6P1N9 297 aa22.18■■□□□ 1.14
VPS51-215ENST00000534557 SIRT2Q8IXJ6 389 aa22.18■■□□□ 1.14
VPS51-215ENST00000534557 GPRC5AQ8NFJ5 357 aa22.18■■□□□ 1.14
VPS51-215ENST00000534557 RBBP6Q7Z6E9 1792 aaKnown RBP22.17■■□□□ 1.14
VPS51-215ENST00000534557 RAB3GAP1Q15042 981 aa22.17■■□□□ 1.14
VPS51-215ENST00000534557 ABCB5Q2M3G0 1257 aa22.17■■□□□ 1.14
VPS51-215ENST00000534557 HTATIP2Q9BUP3 242 aa22.17■■□□□ 1.14
VPS51-215ENST00000534557 CENPFP49454 3210 aa22.16■■□□□ 1.14
VPS51-215ENST00000534557 ZNF532Q9HCE3 1301 aa22.16■■□□□ 1.14
VPS51-215ENST00000534557 ELNP15502 786 aa22.16■■□□□ 1.14
VPS51-215ENST00000534557 AMOTL1Q8IY63 956 aa22.16■■□□□ 1.14
VPS51-215ENST00000534557 DPF3Q92784 378 aa22.16■■□□□ 1.14
VPS51-215ENST00000534557 DDRGK1Q96HY6 314 aa22.16■■□□□ 1.14
VPS51-215ENST00000534557 P2RX7Q99572 595 aaKnown RBP22.16■■□□□ 1.14
VPS51-215ENST00000534557 RIOK1Q9BRS2 568 aaKnown RBP22.16■■□□□ 1.14
VPS51-215ENST00000534557 LRRCC1Q9C099 1032 aa22.16■■□□□ 1.14
VPS51-215ENST00000534557 CWC22Q9HCG8 908 aaKnown RBP22.16■■□□□ 1.14
VPS51-215ENST00000534557 PAG1Q9NWQ8 432 aa22.16■■□□□ 1.14
VPS51-215ENST00000534557 MCM9Q9NXL9 1143 aa22.16■■□□□ 1.14
VPS51-215ENST00000534557 MORF4L1Q9UBU8 362 aa22.16■■□□□ 1.14
VPS51-215ENST00000534557 TFRCP02786 760 aaKnown RBP22.15■■□□□ 1.14
VPS51-215ENST00000534557 INHAP05111 366 aa22.15■■□□□ 1.14
VPS51-215ENST00000534557 ATP5JP18859 108 aa22.15■■□□□ 1.14
VPS51-215ENST00000534557 HERVK_113P62684 666 aa22.15■■□□□ 1.14
VPS51-215ENST00000534557 ZSCAN25Q6NSZ9 544 aa22.15■■□□□ 1.14
VPS51-215ENST00000534557 U2AF1L4Q8WU68 220 aaKnown RBP22.15■■□□□ 1.14
VPS51-215ENST00000534557 BOLA2Q9H3K6 86 aa22.15■■□□□ 1.14
VPS51-215ENST00000534557 PHIPQ8WWQ0 1821 aa22.15■■□□□ 1.14
VPS51-215ENST00000534557 SGPL1O95470 568 aa22.14■■□□□ 1.13
VPS51-215ENST00000534557 MAPK4P31152 587 aa22.14■■□□□ 1.13
VPS51-215ENST00000534557 JAG1P78504 1218 aa22.14■■□□□ 1.13
VPS51-215ENST00000534557 UNC93B1Q9H1C4 597 aa22.14■■□□□ 1.13
VPS51-215ENST00000534557 ZSWIM8A7E2V4 1837 aa22.14■■□□□ 1.13
VPS51-215ENST00000534557 USP17L15C9J2P7 530 aa22.13■■□□□ 1.13
VPS51-215ENST00000534557 USP17L13C9JLJ4 530 aa22.13■■□□□ 1.13
VPS51-215ENST00000534557 USP17L11C9JVI0 530 aa22.13■■□□□ 1.13
VPS51-215ENST00000534557 USP17L18D6R9N7 530 aa22.13■■□□□ 1.13
VPS51-215ENST00000534557 USP17L22D6RA61 530 aa22.13■■□□□ 1.13
VPS51-215ENST00000534557 USP17L17D6RBQ6 530 aa22.13■■□□□ 1.13
VPS51-215ENST00000534557 USP17L19D6RCP7 530 aa22.13■■□□□ 1.13
VPS51-215ENST00000534557 USP17L20D6RJB6 530 aa22.13■■□□□ 1.13
VPS51-215ENST00000534557 PLCD1P51178 756 aa22.13■■□□□ 1.13
VPS51-215ENST00000534557 USP17L24Q0WX57 530 aa22.13■■□□□ 1.13
VPS51-215ENST00000534557 GPATCH3Q96I76 525 aa22.13■■□□□ 1.13
VPS51-215ENST00000534557 NUDT12Q9BQG2 462 aa22.13■■□□□ 1.13
VPS51-215ENST00000534557 EMILIN3Q9NT22 766 aa22.13■■□□□ 1.13
VPS51-215ENST00000534557 PTPRFP10586 1907 aa22.13■■□□□ 1.13
VPS51-215ENST00000534557 MPHOSPH10O00566 681 aaKnown RBP22.12■■□□□ 1.13
VPS51-215ENST00000534557 HMGCRP04035 888 aa22.12■■□□□ 1.13
VPS51-215ENST00000534557 CCNA1P78396 465 aa22.12■■□□□ 1.13
VPS51-215ENST00000534557 TRMT44Q8IYL2 757 aaKnown RBP22.12■■□□□ 1.13
VPS51-215ENST00000534557 SOCS4Q8WXH5 440 aa22.12■■□□□ 1.13
VPS51-215ENST00000534557 HAUS7Q99871 368 aa22.12■■□□□ 1.13
VPS51-215ENST00000534557 ATP8A2Q9NTI2 1148 aa22.12■■□□□ 1.13
VPS51-215ENST00000534557 GLRX3O76003 335 aaKnown RBP22.11■■□□□ 1.13
VPS51-215ENST00000534557 ZYXQ15942 572 aaKnown RBP22.11■■□□□ 1.13
VPS51-215ENST00000534557 C12orf42Q96LP6 360 aa22.11■■□□□ 1.13
VPS51-215ENST00000534557 DEFB118Q96PH6 123 aa22.11■■□□□ 1.13
VPS51-215ENST00000534557 PAGR1Q9BTK6 254 aa22.11■■□□□ 1.13
VPS51-215ENST00000534557 KIAA1683Q9H0B3 1180 aa22.11■■□□□ 1.13
VPS51-215ENST00000534557 SWAP70Q9UH65 585 aa22.11■■□□□ 1.13
VPS51-215ENST00000534557 NR2E3Q9Y5X4 410 aa22.11■■□□□ 1.13
VPS51-215ENST00000534557 ATAD5Q96QE3 1844 aa22.1■■□□□ 1.13
VPS51-215ENST00000534557 FARP2O94887 1054 aaPredicted RBP22.1■■□□□ 1.13
VPS51-215ENST00000534557 ERVK-9P63128 1117 aa22.1■■□□□ 1.13
VPS51-215ENST00000534557 ERVK-24P63145 666 aa22.1■■□□□ 1.13
VPS51-215ENST00000534557 SHROOM1Q2M3G4 852 aaPredicted RBP22.1■■□□□ 1.13
VPS51-215ENST00000534557 SHISA4Q96DD7 197 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms